BAC Information

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BAC

Clone NameB6Ng01-123J10
Chromosome11 (Build37)
Map Location 63,268,273 - 63,400,418
singlet/doubletdoublet
Overlap genenone
Upstream geneNcor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
Downstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123J10.bB6Ng01-123J10.g
ACCDH926712DH926713
length1,122300
definitionDH926712|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J10, 5' end.DH926713|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,399,300 - 63,400,418)(63,268,273 - 63,268,572)
sequence
gaattcaaacaaagtagtgtctagccttgcattgagcagcatagaagttg
tgccccttaaattttcttatatataaaactgtatacatctgcacacaatg
tagtgttagttagattccaagcttagaagcacataagctgggctttcaac
tctgaatatacagctgagttctcagaagctaagtgctgatggcagatgtg
ggggaagctgtatacgataggaaatccagtctgactctcaccatgagata
tcagcaacaccctccgaatcattgtgacaaccaaaatatacctcctagcc
aacggcttccaatattacatccagggagtggagccatctctactgaaaac
agtgctgtagcagaaagacattaggaatctaatcgaagatggacagacag
caaatgccaaaacactgccaagatgcttgtacagagggtgagacccagga
gaaatgattgagagcatgtcttctgtgtctaaaaggagccttcttctttg
gcgcacattagatgattgtggtgcaggtcataggtgaacaggagcccatc
ggaatgttcccagagctacgttcaatgcttccctgctcattccaggacac
acagcattctctgtttcaagcagcatgcagacagagagagaaaggatctg
ggacattttttaactttaaggacagggtcttttaattttccttgttaaat
tcaaatgtcatctgccaaggcatatgaatttcttatcagaaggctttacc
tagctccattgcctgcaaactggcaagagccacctcagctctgcctcctc
ccctttgataacatagctccccgtttgaactcctatctacaaaaggaggg
aaaaggaggaattaaatctttgaaggacctattttctgatacaacccttt
aaaggtcatttctctctggcacatttccagtggcatcaagaagccaatga
aatagctgagtagacttgctagagtgtcattcactgtgttctctatttgg
gttcatagtatagccagaaagttcccactggcttgggctgtctggaatca
cgcttccctctttctgcagggtggtacgacacagaaagttaacttactgg
atccacaggtgagattatgttt
tctagcaccctggtaatgagctgaagcccaaggctaatagcgtttccctt
tcgttgggaattatggggaagctatcgtgacatttgtattaccccagaga
gatcttccactagaaagctgagctttgaagtagtattggatttgctccat
tgagtctgaaaggtttgccactggttttcgggagactcaccccagccaaa
gccaggcctctgggaggctttattcctaggctcaagtaaacaaacagcct
caaatggctgaggccacaaacaaaagtcaaggggtgggggtggggtgggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63399300_63400418
seq2: B6Ng01-123J10.b_43_1164 (reverse)

seq1  AAACAT-ATCTCACCTGT-GAT-CAGTAGGTTAACTTTCTGTGCTGTTAC  47
      |||||| ||||||||||| ||| ||||| ||||||||||||||  ||  |
seq2  AAACATAATCTCACCTGTGGATCCAGTAAGTTAACTTTCTGTGTCGTACC  50

seq1  ACACCTGCAGGAAGAGGGAAGCGTGATCCAGGACAGCCCAAGCCAGTGGG  97
      || ||||||| |||||||||||||||| |  |||||||||||||||||||
seq2  AC-CCTGCAGAAAGAGGGAAGCGTGATTCCAGACAGCCCAAGCCAGTGGG  99

seq1  AACTGTCTGGCTATACTAATGAACCCAAATAGAGAACACAGTGAATGACA  147
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACTTTCTGGCTATACT-ATGAACCCAAATAGAGAACACAGTGAATGACA  148

seq1  CTCTAGCAAGTCTACCTCAGCTATTTCATTGGCTTCTTGATGCCACTGGA  197
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCTAGCAAGTCTA-CTCAGCTATTTCATTGGCTTCTTGATGCCACTGGA  197

seq1  AATGTGCCAGGGAGAAATGACCTTTAAAGGGTTGTATCAG-AAATAGGTC  246
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  AATGTGCCAGAGAGAAATGACCTTTAAAGGGTTGTATCAGAAAATAGGTC  247

seq1  CTTCAAAGATTTAATTCCT-CTTTTCCCTCCTTTTGTAGATAGGAGTTCA  295
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCAAAGATTTAATTCCTCCTTTTCCCTCCTTTTGTAGATAGGAGTTCA  297

seq1  AACGGGGAGCTATGTTATCAAAGGGGAGGAGGCAGAGCTGAGGTGGCTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGGGAGCTATGTTATCAAAGGGGAGGAGGCAGAGCTGAGGTGGCTCT  347

seq1  TGCCAGTTTGCAGGCAATGGAGCTAGGTAAAGCCTTCTGATAAGAAATTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTTTGCAGGCAATGGAGCTAGGTAAAGCCTTCTGATAAGAAATTC  397

seq1  ATATGCCTTGGCAGATGACATTTGAATTTAACAAGG-AAATTAAAAGACC  444
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATATGCCTTGGCAGATGACATTTGAATTTAACAAGGAAAATTAAAAGACC  447

seq1  CTGTCCTTAAAGTTAAAAAATGTCCCAGATCCTTTCTCTCTCTGTCTGCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTAAAGTTAAAAAATGTCCCAGATCCTTTCTCTCTCTGTCTGCA  497

seq1  TGCTGCTTGAAACAGAGAATGCTGTGTGTCCTGGAATGAGCAGGGAAGCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTGAAACAGAGAATGCTGTGTGTCCTGGAATGAGCAGGGAAGCA  547

seq1  TTGAACGTAGCTCTGGGAACATTCCGATGGGCTCCTGTTCACCTATGACC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACGTAGCTCTGGGAACATTCCGATGGGCTCCTGTTCACCTATGACC  597

seq1  TGCACCACAATCATCTAATGTGCGCCAAAGAAGAAGGCTCCTTTTAGACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACAATCATCTAATGTGCGCCAAAGAAGAAGGCTCCTTTTAGACA  647

seq1  CAGAAGACATGCTCTCAATCATTTCTCCTGGGTCTCACCCTCTGTACAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACATGCTCTCAATCATTTCTCCTGGGTCTCACCCTCTGTACAAG  697

seq1  CATCTTGGCAGTGTTTTGGCATTTGCTGTCTGTCCATCTTCGATTAGATT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGCAGTGTTTTGGCATTTGCTGTCTGTCCATCTTCGATTAGATT  747

seq1  CCTAATGTCTTTCTGCTACAGCACTGTTTTCAGTAGAGATGGCTCCACTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGTCTTTCTGCTACAGCACTGTTTTCAGTAGAGATGGCTCCACTC  797

seq1  CCTGGATGTAATATTGGAAGCCGTTGGCTAGGAGGTATATTTTGGTTGTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGTAATATTGGAAGCCGTTGGCTAGGAGGTATATTTTGGTTGTC  847

seq1  ACAATGATTCGGAGGGTGTTGCTGATATCTCATGGTGAGAGTCAGACTGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATTCGGAGGGTGTTGCTGATATCTCATGGTGAGAGTCAGACTGG  897

seq1  ATTTCCTATCGTATACAGCTTCCCCCACATCTGCCATCAGCACTTAGCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTATCGTATACAGCTTCCCCCACATCTGCCATCAGCACTTAGCTT  947

seq1  CTGAGAACTCAGCTGTATATTCAGAGTTGAAAGCCCAGCTTATGTGCTTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACTCAGCTGTATATTCAGAGTTGAAAGCCCAGCTTATGTGCTTC  997

seq1  TAAGCTTGGAATCTAACTAACACTACATTGTGTGCAGATGTATACAGTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTGGAATCTAACTAACACTACATTGTGTGCAGATGTATACAGTTT  1047

seq1  TATATATAAGAAAATTTAAGGGGCACAACTTCTATGCTGCTCAATGCAAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAGAAAATTTAAGGGGCACAACTTCTATGCTGCTCAATGCAAG  1097

seq1  GCTAGACACTACTTTGTTTGAATTC  1119
      |||||||||||||||||||||||||
seq2  GCTAGACACTACTTTGTTTGAATTC  1122

seq1: chr11_63268273_63268572
seq2: B6Ng01-123J10.g_76_375

seq1  TCTAGCACCCTGGTAATGAGCTGAAGCCCAAGGCTAATAGCGTTTCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCACCCTGGTAATGAGCTGAAGCCCAAGGCTAATAGCGTTTCCCTT  50

seq1  TCGTTGGGAATTATGGGGAAGCTATCGTGACATTTGTATTACCCCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGGGAATTATGGGGAAGCTATCGTGACATTTGTATTACCCCAGAGA  100

seq1  GATCTTCCACTAGAAAGCTGAGCTTTGAAGTAGTATTGGATTTGCTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCACTAGAAAGCTGAGCTTTGAAGTAGTATTGGATTTGCTCCAT  150

seq1  TGAGTCTGAAAGGTTTGCCACTGGTTTTCGGGAGACTCACCCCAGCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGAAAGGTTTGCCACTGGTTTTCGGGAGACTCACCCCAGCCAAA  200

seq1  GCCAGGCCTCTGGGAGGCTTTATTCCTAGGCTCAAGTAAACAAACAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCTCTGGGAGGCTTTATTCCTAGGCTCAAGTAAACAAACAGCCT  250

seq1  CAAATGGCTGAGGCCACAAACAAAAGTCAAGGGGTGGGGGTGGGGTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGCTGAGGCCACAAACAAAAGTCAAGGGGTGGGGGTGGGGTGGGG  300