BAC Information

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BAC

Clone NameB6Ng01-125B01
Chromosome11 (Build37)
Map Location 121,300,771 - 121,478,852
singlet/doubletdoublet
Overlap geneFn3k, Tbcd, Zfp750, B3gntl1
Upstream geneTspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265
Downstream geneMetrnl, Ptchd3, LOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125B01.bB6Ng01-125B01.g
ACCDH927809DH927810
length1051,078
definitionDH927809|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B01, 5' end.DH927810|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,300,771 - 121,300,875)(121,477,762 - 121,478,852)
sequence
atggtgcttcttggtggcacttcagtaatgtgttgaatggcatacctgct
ccctttacagtgcattaaacaactttttaaaatttgtgtgtggggggtgg
tggtg
gaattctgcccatctgcaacagcttaatgagcctcaggcatcagatacaa
agaggcagaggaggcagacatgggactcccacagcaggacaggtaggcat
gcaggccctgggaccagaggtgccattcatatgcccacagggatgctggc
ttctgatgatctctcagactgttgtagcattgttggtgtcttggctggcc
gagcacgtgggagctgcctgtcacttcatctgcccagcacttcagactac
accagggtctgaaacgcccctcatgctacaggaatcacacagcaaagcac
tgaaggggagagagccacagcagatcctccagctccttgtgcacggacgt
cccagagataggcagaggctgggctgtgtgatacatgatttaatgagaag
cacgtctgtgacagcaaacgtatgggcagtcccggccaccagagcaaagc
acgcatgaggaattactgctctccagggatggcctcccaatgaaggtgct
accttcctcagatgtctgtggcaccaagtttccatgatggtaaagcttgt
tgtggagcctcagggcgagacatcccagctaggtaggcaaggctcagctt
cctggaataggctgtaaagagacatggcaacatcaggctggttgctacct
caccctctcttgatagatggctaaagcctgccatgtcccagaatcctggc
agcttgaattgtgtagtaatagctctgtggccttgtcagagtacataata
aactgtttgcatatgtttaaacttttctaacaatgtaaagggcagagttc
accttgcataaggaccaagactccaccatggccccatctcttgtcaccac
tcctagagcaacacctgtgtatctctcatatggctcctgcaggggaagcc
ctgggaagacttgggcacacagagagaaaaaacaaaacctcttacacatg
acacagacatgacaggagctcagcacagagctgacagagcaagttagaag
ctgaccagtgaaaccatgcctgctaattccaagacctcaggtagaacagc
cagtttcaacaggcctctgccgctggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121300771_121300875
seq2: B6Ng01-125B01.b_54_158

seq1  ATGGTGCTTCTTGGTGGCACTTCAGTAATGTGTTGAATGGCATACCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTTCTTGGTGGCACTTCAGTAATGTGTTGAATGGCATACCTGCT  50

seq1  CCCTTTACAGTGCATTAAACAACTTTTTAAAATTTGTGTGTGGGGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTACAGTGCATTAAACAACTTTTTAAAATTTGTGTGTGGGGGGTGG  100

seq1  TGGTG  105
      |||||
seq2  TGGTG  105

seq1: chr11_121477762_121478852
seq2: B6Ng01-125B01.g_68_1145 (reverse)

seq1  CTCCAGCTGCAGAGCCCTGTCTGAAACTGGCTTGTTCTAACCCTGAGGTC  50
      ||||||| |||||| ||||| |||||||||| |||||||  |||||||||
seq2  CTCCAGCGGCAGAGGCCTGT-TGAAACTGGC-TGTTCTA--CCTGAGGTC  46

seq1  TTGGAATTTAGCAGGCATGGTCTCACTGGTCAGCTTCTTAACTTGCTCTT  100
      |||||| |||||||||||||| ||||||||||||||| |||||||||| |
seq2  TTGGAA-TTAGCAGGCATGGTTTCACTGGTCAGCTTC-TAACTTGCTC-T  93

seq1  GTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGG  150
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  GTCAGCTCTGTG-CTGAGCTCCTGTCATGTCTGTGTCATG-TGTAAGAGG  141

seq1  TTTTGTTTTTTCCTCTCTGTGTGCCCAAGTCTTCCCAGGGCTTCCCCCTG  200
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TTTTGTTTTTT-CTCTCTGTGTGCCCAAGTCTTCCCAGGGCTT-CCCCTG  189

seq1  CAGGAGCCATATGAGAGATACACAGGTGTTGCTCTAGGAGTGGTGACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCATATGAGAGATACACAGGTGTTGCTCTAGGAGTGGTGACAAG  239

seq1  AGATGGGGCCATGGTGGAGTCTTGGTCCCTTATGCAAGGTGAACTCTGCC  300
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGATGGGGCCATGGTGGAGTCTTGGT-CCTTATGCAAGGTGAACTCTGCC  288

seq1  CTTTACATTGTTAGAAAAGTTTAAACATATGCAAACAGTTTATTAATGTA  350
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTACATTGTTAGAAAAGTTTAAACATATGCAAACAGTTTATT-ATGTA  337

seq1  CTCTGACAAGGCCACAGAGCTATTACTACACAATTCAAGCTGCCAGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACAAGGCCACAGAGCTATTACTACACAATTCAAGCTGCCAGGATT  387

seq1  CTGGGACATGGCAGGCTTTAGCCATCTATCAAGAGAGGGTGAGGTAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACATGGCAGGCTTTAGCCATCTATCAAGAGAGGGTGAGGTAGCAA  437

seq1  CCAGCCTGATGTTGCCATGTCTCTTTACAGCCTATTCCAGGAAGCTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGATGTTGCCATGTCTCTTTACAGCCTATTCCAGGAAGCTGAGC  487

seq1  CTTGCCTACCTAGCTGGGATGTCTCGCCCTGAGGCTCCACAACAAGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTACCTAGCTGGGATGTCTCGCCCTGAGGCTCCACAACAAGCTTT  537

seq1  ACCATCATGGAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCATGGAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTC  587

seq1  ATTGGGAGGCCATCCCTGGAGAGCAGTAATTCCTCATGCGTGCTTTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAGGCCATCCCTGGAGAGCAGTAATTCCTCATGCGTGCTTTGCTC  637

seq1  TGGTGGCCGGGACTGCCCATACGTTTGCTGTCACAGACGTGCTTCTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCCGGGACTGCCCATACGTTTGCTGTCACAGACGTGCTTCTCATT  687

seq1  AAATCATGTATCACACAGCCCAGCCTCTGCCTATCTCTGGGACGTCCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGTATCACACAGCCCAGCCTCTGCCTATCTCTGGGACGTCCGTG  737

seq1  CACAAGGAGCTGGAGGATCTGCTGTGGCTCTCTCCCCTTCAGTGCTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGAGCTGGAGGATCTGCTGTGGCTCTCTCCCCTTCAGTGCTTTGC  787

seq1  TGTGTGATTCCTGTAGCATGAGGGGCGTTTCAGACCCTGGTGTAGTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATTCCTGTAGCATGAGGGGCGTTTCAGACCCTGGTGTAGTCTGA  837

seq1  AGTGCTGGGCAGATGAAGTGACAGGCAGCTCCCACGTGCTCGGCCAGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGCAGATGAAGTGACAGGCAGCTCCCACGTGCTCGGCCAGCCA  887

seq1  AGACACCAACAATGCTACAACAGTCTGAGAGATCATCAGAAGCCAGCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCAACAATGCTACAACAGTCTGAGAGATCATCAGAAGCCAGCATC  937

seq1  CCTGTGGGCATATGAATGGCACCTCTGGTCCCAGGGCCTGCATGCCTACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGCATATGAATGGCACCTCTGGTCCCAGGGCCTGCATGCCTACC  987

seq1  TGTCCTGCTGTGGGAGTCCCATGTCTGCCTCCTCTGCCTCTTTGTATCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCTGTGGGAGTCCCATGTCTGCCTCCTCTGCCTCTTTGTATCTG  1037

seq1  ATGCCTGAGGCTCATTAAGCTGTTGCAGATGGGCAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGAGGCTCATTAAGCTGTTGCAGATGGGCAGAATTC  1078