BAC Information

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BAC

Clone NameB6Ng01-125D05
Chromosome11 (Build37)
Map Location 24,193,897 - 24,283,141
singlet/doubletdoublet
Overlap genenone
Upstream geneXpo1, LOC100042202, Ahsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125D05.bB6Ng01-125D05.g
ACCDH927903DH927904
length5991,001
definitionDH927903|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D05, 5' end.DH927904|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,282,615 - 24,283,141)(24,193,897 - 24,194,904)
sequence
gaattctcaactgaggaatactgaatgtctgagaagcacctaaataaata
ttcaacatcctaagtcatcagagaaatgcaaatcaaaacaacctagttca
acaatttcacttcacaccagtcagaatggctaagatcaaaaattcaggtg
acagcagatgctggtgaggatgtggagaaagaggaatattcctccattgc
tggtggaattgcaagctggtacaaccctctggaaatcagtttgatgaatc
ctcagaaaattggacagagaactacctgaggatccagctataccaccctg
ggtgtagacccagaagatgctccaacatggaataaggacacatgctccac
tatgtttatagaagccttatttataatagccagaagctggaaagaaccca
gatgtccctcaacagatgaatggatacagaaaatgtggtacatttacaca
atggagtactacacagagattgtggcatcatgaacaacagagagagggaa
atggatacaaagacccaccaccaaccaagaagctatttgtaattgatacc
tccctggagaggaaaactggctgggtttggtttgggtggtgttgttgtt
gaattcaatttgaagaatttattttttatttttaattaccattactgcat
tttaagaaaaagaaaccagtttggctgcttccctgctggagctcagagct
gagtttgccggagaccactctctgctcctggggatgaagctgatctcagt
tcacagcccattgtctttacacccttcctggtgactaatactgtaagatt
tcctttaaaaacaattcttccttgaagtgggtttcaaatccccaaagaat
ttctaggagggaggaaaaaaaatcctttaattgaaagtgagagaaaacaa
aacaaagaaagcataagagatctgacaaaaatatcatgtttaatgaaatc
aagttctacccctgcagatggctggggagacacaagaatgacccaaagac
agaaaaaccggtttccctcccgtgttctgcaaagtgtggcttttcttttg
aatattctgcgtacctgaccaggacctgtcccagcttctgagcctgacta
tccaggtagcaggaggcgttctcagctgttctctgagcctgcccagcttc
ttaactgtgtgttaaggtttaatcacttccaagtgattccttggcttcgt
tctttgtaaagcgtcagaagtctcattgaccttgggagtgtgtgggggat
tgtttaagacagtaagaaggtagttcttggtgtgatgctgggccctttaa
gaaacagaactggtcatcacccattttgactttattttgagccaagtgag
gtgtaggggtccacagggcatccagtttccccagtgttctctgctgaaga
gggaggcttttccatggtgtatgcttctggcacgtggtggctagtttcat
gtcaacttgacacaagctagaatcattagaaaggagggaacttccactga
ggcatgcctcatagatctggctatataaggcattttcttaatagtgattg
atgtgggggaggagcaaggccaccccactgtagtggtgctatcctgggtt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24282615_24283141
seq2: B6Ng01-125D05.b_121_647 (reverse)

seq1  AACAACAACACCACCCAAACCAAACCCAGCCAGTTTTCCTCTCCAGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACACCACCCAAACCAAACCCAGCCAGTTTTCCTCTCCAGGGAG  50

seq1  GTATCAATTACAAATAGCTTCTTGGTTGGTGGTGGGTCTTTGTATCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAATTACAAATAGCTTCTTGGTTGGTGGTGGGTCTTTGTATCCATT  100

seq1  TCCCTCTCTCTGTTGTTCATGATGCCACAATCTCTGTGTAGTACTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCTCTGTTGTTCATGATGCCACAATCTCTGTGTAGTACTCCATT  150

seq1  GTGTAAATGTACCACATTTTCTGTATCCATTCATCTGTTGAGGGACATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAATGTACCACATTTTCTGTATCCATTCATCTGTTGAGGGACATCT  200

seq1  GGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTATAAACATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTATAAACATAG  250

seq1  TGGAGCATGTGTCCTTATTCCATGTTGGAGCATCTTCTGGGTCTACACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCATGTGTCCTTATTCCATGTTGGAGCATCTTCTGGGTCTACACCC  300

seq1  AGGGTGGTATAGCTGGATCCTCAGGTAGTTCTCTGTCCAATTTTCTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGTATAGCTGGATCCTCAGGTAGTTCTCTGTCCAATTTTCTGAGG  350

seq1  ATTCATCAAACTGATTTCCAGAGGGTTGTACCAGCTTGCAATTCCACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAAACTGATTTCCAGAGGGTTGTACCAGCTTGCAATTCCACCAG  400

seq1  CAATGGAGGAATATTCCTCTTTCTCCACATCCTCACCAGCATCTGCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGGAATATTCCTCTTTCTCCACATCCTCACCAGCATCTGCTGTC  450

seq1  ACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAAGTGAAATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAAGTGAAATTGTT  500

seq1  GAACTAGGTTGTTTTGATTTGCATTTC  527
      |||||||||||||||||||||||||||
seq2  GAACTAGGTTGTTTTGATTTGCATTTC  527

seq1: chr11_24193897_24194904
seq2: B6Ng01-125D05.g_65_1065

seq1  GAATTCAATTTGAAGAATTTATTTTTTATTTTTAATTACCATTACTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTGAAGAATTTATTTTTTATTTTTAATTACCATTACTGCAT  50

seq1  TTTAAGAAAAAGAAACCAGTTTGGCTGCTTCCCTGCTGGAGCTCAGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAAAAGAAACCAGTTTGGCTGCTTCCCTGCTGGAGCTCAGAGCT  100

seq1  GAGTTTGCCGGAGACCACTCTCTGCTCCTGGGGATGAAGCTGATCTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGCCGGAGACCACTCTCTGCTCCTGGGGATGAAGCTGATCTCAGT  150

seq1  TCACAGCCCATTGTCTTTACACCCTTCCTGGTGACTAATACTGTAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCCATTGTCTTTACACCCTTCCTGGTGACTAATACTGTAAGATT  200

seq1  TCCTTTAAAAACAATTCTTCCTTGAAGTGGGTTTCAAATCCCCAAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAAAACAATTCTTCCTTGAAGTGGGTTTCAAATCCCCAAAGAAT  250

seq1  TTCTAGGAGGGAGGAAAAAAAATCCTTTAATTGAAAGTGAGAGAAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGAGGGAGGAAAAAAAATCCTTTAATTGAAAGTGAGAGAAAACAA  300

seq1  AACAAAGAAAGCATAAGAGATCTGACAAAAATATCATGTTTAATGAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAGCATAAGAGATCTGACAAAAATATCATGTTTAATGAAATC  350

seq1  AAGTTCTACCCCTGCAGATGGCTGGGGAGACACAAGAATGACCCAAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTACCCCTGCAGATGGCTGGGGAGACACAAGAATGACCCAAAGAC  400

seq1  AGAAAAACCGGTTTCCCTCCCGTGTTCTGCAAAGTGTGGCTTTTCTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACCGGTTTCCCTCCCGTGTTCTGCAAAGTGTGGCTTTTCTTTTG  450

seq1  AATATTCTGCGTACCTGACCAGGACCTGTCCCAGCTTCTGAGCCTGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTGCGTACCTGACCAGGACCTGTCCCAGCTTCTGAGCCTGACTA  500

seq1  TCCAGGTAGCAGGAGGCGTTCTCAGCTGTTCTCTGAGCCTGCCCAGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTAGCAGGAGGCGTTCTCAGCTGTTCTCTGAGCCTGCCCAGCTTC  550

seq1  TTAACTGTGTGTTAAGGTTTAATCACTTCCAAGTGATTCCTTGGCTTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTGTGTTAAGGTTTAATCACTTCCAAGTGATTCCTTGGCTTCGT  600

seq1  TCTTTGTAAAGCGTCAGAAGTCTCATTGACCTTGGGAGTGTGT-GGGGAT  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTTTGTAAAGCGTCAGAAGTCTCATTGACCTTGGGAGTGTGTGGGGGAT  650

seq1  TGTTTAAGACAGTAAGAAGGTAGTTCTTGGTGTGATGCT-GGCCCTTTAA  698
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTTTAAGACAGTAAGAAGGTAGTTCTTGGTGTGATGCTGGGCCCTTTAA  700

seq1  GAAACAGAACTGGTCATCAACCCATTTTGACTTTATTTTTGAGCCAAGTG  748
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  GAAACAGAACTGGTCATC-ACCCATTTTGACTTTA-TTTTGAGCCAAGTG  748

seq1  AGGTGTAGGGGTCCACAGGGCATCCAGTTTCCCCAGTGTTCTCTGCTGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAGGGGTCCACAGGGCATCCAGTTTCCCCAGTGTTCTCTGCTGAA  798

seq1  GAGGGAGGCTTTTCCATGGTGTATGCTTCTGGCACGTGGTGGCTAGTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGCTTTTCCATGGTGTATGCTTCTGGCACGTGGTGGCTAGTTTC  848

seq1  ATGTCAACTTGACACAAGCTAGAATCATTAGAAAGGAGGGAACTTCAACT  898
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGTCAACTTGACACAAGCTAGAATCATTAGAAAGGAGGGAACTTCCACT  898

seq1  GAGGCAATGCCTCCATAAGATCTGGCTATAATAAGGCATTTTCTTAATTA  948
      ||||| |||||| ||| |||||||||||| ||||||||||||||||| ||
seq2  GAGGC-ATGCCT-CAT-AGATCTGGCTAT-ATAAGGCATTTTCTTAA-TA  943

seq1  GTGATTGATGT-GGGGTGGAGCCAGGGCCACCACACTGTAGGTGGTGCTA  997
      ||||||||||| |||| |||| || ||||||| ||||||| |||||||||
seq2  GTGATTGATGTGGGGGAGGAG-CAAGGCCACCCCACTGTA-GTGGTGCTA  991

seq1  TCCTTGGGTTG  1008
      ||| |||||||
seq2  TCC-TGGGTTG  1001