BAC Information

Click to search

BAC

Clone NameB6Ng01-126K08
Chromosome11 (Build37)
Map Location 102,759,618 - 102,760,422
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC194960, Sost, Dusp3, 1700006E09Rik, Mpp3, Cd300lg, Mpp2, Ppy, Pyy, LOC100040687, LOC666411, Nags, Tmem101, Lsm12, G6pc3, Hdac5, BC030867, Asb16, 2010008E23Rik, Ubtf, Slc4a1, Rap2ip, Slc25a39, Grn, BC025575, Itga2b, Mdk-ps1, LOC100040792, Fzd2, 2810433D01Rik, Psmb5-ps, Gm1564, LOC100042456, Ccdc43, Adam11, Gja7, Higd1b, Eftud2, Ccdc103, LOC100042500, Gfap
Downstream gene3000004C01Rik, C1ql1, Dcakd, Nmt1, Plcd3, Acbd4, Hexim1, Hexim2, Fmnl1, 4933400C05Rik, Map3k14, Arhgap27, 5730442P18Rik, Plekhm1, Lrrc37a, Gm884, Lyzl6, Rprml, Gosr2, Wnt9b, Wnt3, Nsf, EG667631
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126K08.bB6Ng01-126K08.g
ACCDH928960DH928961
length507805
definitionDH928960|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K08, 5' end.DH928961|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cttctctactttggtcagtgaactttcaaattcccaggatctgcagagcc
agaaccctgacaaacctgtgtgtcacatggccatccaatacagcaagtgc
cccacgcccacacccttagtcagtccaatacagcaagtgccccacgccca
cacccttagtcagtccaatacagcaagtgccccacgcccacacccttagt
cagtcctcatttcttagcccatcagtggtgtgaactgaagtctctccctc
cctccctgcctccctccctccctccctccctccctccctccacaaattct
cttcgtgtaacccaggctggccctgacctctttgtggaggtatctcattt
tccattcggattggcggacatggatgtgaagaagtcatatccttcctaac
ttctgtttcacagggttatggcaaggagacagaactagaaaattgaacac
tcattctatgaatcaattgaaggacgaacaaccttcgtccctgagcagtt
gaaactc
gaattccatacctgcttgatccacatatgaactacagggggacatgatga
ggtccagtctaaaggtcactggcaacctctctcaagatctccctcactat
gccattattcaggattggggaagatgtggctggagcctaaggggctcttc
ccttccctatggtgggactcattaggagaacctcagcaagcagcccactg
taagctcaaacaaataccatgtcgctggtatggagtataggctgttgcta
tgacaggaactcaggggtcttaactggcttgagcgctgggagggggcaag
cagccaggccttgtctgtaagctgaagacctggcagtgctgagctggtca
gcccccaggacctccttttgtgcccacgagtgactcaccttggcatagac
ataatggtcaggggtgggcacgcagcctgcttcccgctgtgctccaggcc
tccttcgatgctttccgagaagtctattgagctgggagcttgtactgcac
ccggggctgacatcctggcatcctgggataaaagcagcccacggggctgc
ccttgccatatgcctcactggcggcagagaacaaggctctattcagcgag
taccctggagtagacaccagaagcccaagcatgggcagaggaaggcaggg
gttggggggagcagagctgtctgtgttccagaagcccaaggacacagatg
gctaagcgcctgggagagggacctgagtggaagagatagatgggcctgaa
gtctcaagcagcaacagcctcctccccgccattggtgagggtgggggttt
ggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_102759618_102760422
seq2: B6Ng01-126K08.g_68_872 (reverse)

seq1  AAACCAAA-CCCCACCCTCACCAATGGCGGGGAGGAGGCTGTTGCTGCTT  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAACCCCCACCCTCACCAATGGCGGGGAGGAGGCTGTTGCTGCTT  50

seq1  GAGACTTCAGGCCCATCTATCTCTTCCACTCAGGTCCCTCTCCCAGGCGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAGACTTCAGGCCCATCTATCTCTTCCACTCAGGTCCCTCTCCCAGGCG-  99

seq1  CTTAGCCATCTGTGTCCTTGGGCTTCTGGAACACAGACAGCTCTGCTCCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCATCTGTGTCCTTGGGCTTCTGGAACACAGACAGCTCTGCTCCC  149

seq1  CCCAACCCCTGCCTTCCTCTGCCCATGCTTGGGCTTCTGGTGTCTACTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCCCTGCCTTCCTCTGCCCATGCTTGGGCTTCTGGTGTCTACTCC  199

seq1  AGGGTACTCGCTGAATAGAGCCTTGTTCTCTGCCGCCAGTGAGGCATATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACTCGCTGAATAGAGCCTTGTTCTCTGCCGCCAGTGAGGCATATG  249

seq1  GCAAGGGCAGCCCCGTGGGCTGCTTTTATCCCAGGATGCCAGGATGTCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGCAGCCCCGTGGGCTGCTTTTATCCCAGGATGCCAGGATGTCAG  299

seq1  CCCCGGGTGCAGTACAAGCTCCCAGCTCAATAGACTTCTCGGAAAGCATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGGTGCAGTACAAGCTCCCAGCTCAATAGACTTCTCGGAAAGCATC  349

seq1  GAAGGAGGCCTGGAGCACAGCGGGAAGCAGGCTGCGTGCCCACCCCTGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGCCTGGAGCACAGCGGGAAGCAGGCTGCGTGCCCACCCCTGAC  399

seq1  CATTATGTCTATGCCAAGGTGAGTCACTCGTGGGCACAAAAGGAGGTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGTCTATGCCAAGGTGAGTCACTCGTGGGCACAAAAGGAGGTCCT  449

seq1  GGGGGCTGACCAGCTCAGCACTGCCAGGTCTTCAGCTTACAGACAAGGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTGACCAGCTCAGCACTGCCAGGTCTTCAGCTTACAGACAAGGCC  499

seq1  TGGCTGCTTGCCCCCTCCCAGCGCTCAAGCCAGTTAAGACCCCTGAGTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTTGCCCCCTCCCAGCGCTCAAGCCAGTTAAGACCCCTGAGTTC  549

seq1  CTGTCATAGCAACAGCCTATACTCCATACCAGCGACATGGTATTTGTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATAGCAACAGCCTATACTCCATACCAGCGACATGGTATTTGTTTG  599

seq1  AGCTTACAGTGGGCTGCTTGCTGAGGTTCTCCTAATGAGTCCCACCATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACAGTGGGCTGCTTGCTGAGGTTCTCCTAATGAGTCCCACCATAG  649

seq1  GGAAGGGAAGAGCCCCTTAGGCTCCAGCCACATCTTCCCCAATCCTGAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAAGAGCCCCTTAGGCTCCAGCCACATCTTCCCCAATCCTGAAT  699

seq1  AATGGCATAGTGAGGGAGATCTTGAGAGAGGTTGCCAGTGACCTTTAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATAGTGAGGGAGATCTTGAGAGAGGTTGCCAGTGACCTTTAGAC  749

seq1  TGGACCTCATCATGTCCCCCTGTAGTTCATATGTGGATCAAGCAGGTATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTCATCATGTCCCCCTGTAGTTCATATGTGGATCAAGCAGGTATG  799

seq1  GAATTC  805
      ||||||
seq2  GAATTC  805