BAC Information

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BAC

Clone NameB6Ng01-128C18
Chromosome11 (Build37)
Map Location 66,506,538 - 66,507,649
singlet/doubletsinglet
Overlap genenone
Upstream geneMap2k4, Zkscan6, Dnahc9, Gm879, LOC668323
Downstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128C18.bB6Ng01-128C18.g
ACCDH930095DH930096
length1,0911,243
definitionDH930095|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C18, 5' end.DH930096|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaagatgggattctataagtagataaaaggagagaaaacttct
atatactcctgaggggaaaatgtaagctcacagtgaggaggaagccctgc
aagcctagggcagaccccctccccttagagctcaccactctgacccccta
tgtctccaggcatgtaaaaactatatttctgctattttagtcactcaccc
tgaggtattttgtaataccacccaaagaagactaagactcatgtagcatt
tattaccaaaactttcaaacatatttgcataaccaaccacatcacttttg
ttctggatgcactttatttttaagtctgtgctttatttgttattttcacc
cctctactctttattgatagaaagatttttgtatcaatttataaatcttt
tacctagctatagcttaataaaataaatcttctagatatttctatcaagt
ctttgtctccagagaatcaagcactgaaattttggtggactcagttcaag
acgctccatcggctatgtgttatttgtagaaaacaagtagattgacttgc
aaacatgttcaaagctttgtaaatcttttcaatggtttaatctttgacag
tttcatccatggatacaatgtatctattcaatgtatggaatgaatgagtt
aaccccattatcctatttgatcctcctcccttctcttgctaaaacatttc
tcacccccaagatcccatcctactttcatgtctttcttgtgtgtattggc
cactggtttaaaaagagcttccggtgccgccttgagttggggttagtcgc
tgcagcatgggcaactgatgagtggtcacaccaccgccaccaccgtggag
catggcaggccttcatccagctgccagtcactgtcaacagtctttcgaga
ggggtatatgagttgactttttaaaagcaggaaataaggggtttctgttc
atcctccttatacttcatttgttatatattttctgtatgtaatttcaagt
tccattgttgtacacttctttcattttctcaaagtggtcagaactgcccc
tagaggggaaggtccctaacaccagtgacctcacagtctga
gaattcttcatagttggaaagagcaatttgcaaattcatttgtaataaca
aaaacccaggatagcgaaactattctcagcaataaaagaacttctgggga
atcactatccctgacatcacactgtattacagagcaatcgtgataaaaat
ggtatggtattggtacagagacaggcaggtagatcaatggaatagaactg
aagacccagaaatgaacccacacacctatggtcacttgatcttagacaaa
ggacctaaaaccatccagtggaaaaaaagacagcattttcaacaaatggt
gctggttcaactggtggtcagaaagtagaagaatgcaaattgatccattc
ttatctccttgtacaaaactcaagtccaagtggatcaaggacctcctcat
aaaatcagatacactgaaactaatagaagagaaagtggtgaaaaacacat
ggacacaggggaaaatctttgaacagaatcttagagcttatgctctaaga
ttaacaatagacaaatgagatctcacaaaattgcaaagcttctgtaaggc
agagggcactgtaaataggacaaaatggcaaccaacatattgggaaaaga
tctttaccaagcctacatctgatagagggctaatatccaatacatacaaa
gaactcaagaagttaagactccaaagaatcaaataaccctattaaaaatg
tggtacatttacacaatggagtactactcagcaattaaaaacaatgattt
catgaaattcctaggcaaatggatggatctggaggatataatcctgagag
aggtaacccaatcacaaaagaactcacatgatatgcactcaccgataagc
agatattagcccaaaaaagaatatccaagatacagtttgcaaaacacatg
aaactcaagaagaaggaagaccaaagtgtgatacttcgctccttctagaa
tggggaacaaaatacccatggaaggagtacagagacaaagttcagagctg
agatggaagaaagaccatctagagactgcccactggggatccatcccata
aacaccaccaaacccagacactatgtatttgtcaagaagattagctgaca
gaccctgacatagctctctccttgtgggagcctatgccaaaccttgcaaa
tacgaattggaatctccaggtcatctattggaattgaacagagcccttag
tgaatagacgacttagagtaagaagtaatcctaaagagtagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66506538_66507649
seq2: B6Ng01-128C18.b_44_1134

seq1  GAATTCTTAAGATGGGATTCTATAAGTAGATAAAAGGAGAGAAAACTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGATGGGATTCTATAAGTAGATAAAAGGAGAGAAAACTTCT  50

seq1  ATATACTCCTGAGGGGAAAATGTAAGCTCACAGTGAGGAGGAAGCCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTCCTGAGGGGAAAATGTAAGCTCACAGTGAGGAGGAAGCCCTGC  100

seq1  AAGCCTAGGGCAGACCCCCTCCCCTTAGAGCTCACCACTCTGACCCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAGGGCAGACCCCCTCCCCTTAGAGCTCACCACTCTGACCCCCTA  150

seq1  TGTCTCCAGGCATGTAAAAACTATATTTCTGCTATTTTAGTCACTCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAGGCATGTAAAAACTATATTTCTGCTATTTTAGTCACTCACCC  200

seq1  TGAGGTATTTTGTAATACCACCCAAAGAAGACTAAGACTCATGTAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATTTTGTAATACCACCCAAAGAAGACTAAGACTCATGTAGCATT  250

seq1  TATTACCAAAACTTTCAAACATATTTGCATAACCAACCACATCACTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCAAAACTTTCAAACATATTTGCATAACCAACCACATCACTTTTG  300

seq1  TTCTGGATGCACTTTATTTTTAAGTCTGTGCTTTATTTGTTATTTTCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATGCACTTTATTTTTAAGTCTGTGCTTTATTTGTTATTTTCACC  350

seq1  CCTCTACTCTTTATTGATAGAAAGATTTTTGTATCAATTTATAAATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTCTTTATTGATAGAAAGATTTTTGTATCAATTTATAAATCTTT  400

seq1  TACCTAGCTATAGCTTAATAAAATAAATCTTCTAGATATTTCTATCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGCTATAGCTTAATAAAATAAATCTTCTAGATATTTCTATCAAGT  450

seq1  CTTTGTCTCCAGAGAATCAAGCACTGAAATTTTGGTGGACTCAGTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTCCAGAGAATCAAGCACTGAAATTTTGGTGGACTCAGTTCAAG  500

seq1  ACGCTCCATCGGCTATGTGTTATTTGTAGAAAACAAGTAGATTGACTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCCATCGGCTATGTGTTATTTGTAGAAAACAAGTAGATTGACTTGC  550

seq1  AAACATGTTCAAAGCTTTGTAAATCTTTTCAATGGTTTAATCTTTGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTCAAAGCTTTGTAAATCTTTTCAATGGTTTAATCTTTGACAG  600

seq1  TTTCATCCATGGATACAATGTATCTATTCAATGTATGGAATGAATGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCATGGATACAATGTATCTATTCAATGTATGGAATGAATGAGTT  650

seq1  AACCCCATTATCCTATTTGATCCTCCTCCCTTCTCTTGCTAAAACATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCATTATCCTATTTGATCCTCCTCCCTTCTCTTGCTAAAACATTTC  700

seq1  TCACCCCCAAGATCCCATCCTACTTTCATGTCTTTCTTGTGTGTATTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCCAAGATCCCATCCTACTTTCATGTCTTTCTTGTGTGTATTGGC  750

seq1  CACTGGTTTAAAAAGAGCTTCCGGTGCCGCCTTGAGTTGGGGTTAGTCGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTTTAAAAAGAGCTTCCGGTGCCGCCTTGAGTTGGGGTTAGTCGC  800

seq1  TGCAGCATGGGCAACTGATGAGTGGTCACACCACCGCCACCACCGTGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATGGGCAACTGATGAGTGGTCACACCACCGCCACCACCGTGGAG  850

seq1  CATGGCAGGCCTTCATCCAGCTGCCAGTCACTGTCAACAGTCCTTCCGAG  900
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  CATGGCAGGCCTTCATCCAGCTGCCAGTCACTGTCAACAGT-CTTTCGAG  899

seq1  AGGGGTTATATGAGTTGACTTTTTTAAAAGGCAGAAAATAA-GGGTTTCT  949
      ||||| ||||||||||||||||||  ||| |||| |||||| ||||||||
seq2  AGGGG-TATATGAGTTGACTTTTT--AAAAGCAGGAAATAAGGGGTTTCT  946

seq1  GTTCATCCTCCTTATACTTCATTTGTTTATTAATTATTTTCCTGTATGTA  999
      |||||||||||||||||||||||||    |||  |||||| |||||||| 
seq2  GTTCATCCTCCTTATACTTCATTTG----TTATATATTTT-CTGTATGT-  990

seq1  AATTTCAAGTTCCATTGTTGTAACACTTCTTTCATTTTTCTCAAAGTTGG  1049
      ||||||||||||||||||||| |||||||||||| ||||||||||| |||
seq2  AATTTCAAGTTCCATTGTTGT-ACACTTCTTTCA-TTTTCTCAAAG-TGG  1037

seq1  TCAGAACTGCCCCCTTAAGGAGGGGGAAAGGTCCCTAAACAACCAGTGAC  1099
      |||||||||||||  ||  ||||||  |||||||||||   |||||||| 
seq2  TCAGAACTGCCCC--TA--GAGGGG--AAGGTCCCTAA--CACCAGTGA-  1078

seq1  CCCCACAGTCTGA  1112
      || ||||||||||
seq2  CCTCACAGTCTGA  1091