BAC Information

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BAC

Clone NameB6Ng01-129B06
Chromosome11 (Build37)
Map Location 67,266,532 - 67,427,066
singlet/doubletdoublet
Overlap geneGas7
Upstream geneGm879, LOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
Downstream geneRcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129B06.bB6Ng01-129B06.g
ACCDH930760DH930761
length1,122991
definitionDH930760|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B06, 5' end.DH930761|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,426,006 - 67,427,066)(67,266,532 - 67,267,537)
sequence
gaattctagcgtagccagagctatacagtgagactctgtctccaacaaat
gtctagtagaagaacatcaggaagtgaggccacagggaggatactgttcc
ctagcaggggacactaggaatccaacctctttctaactttctttttgttt
cctggccaccatgaggtgagcgtgcctcctgtgccaacactcccaccaca
atgtgctctggaaccatgagtctaaacaaacctttcttctttatcagttg
attatctcaggtactttatcacagtgacagaaagctaactcaatgatgtc
tgtatcaattttgttgttagtgagtctccttgcaatcagaaaaaaaaggt
aagtggagactattaggaagcacttaagaatatgaagtaaaatgctttac
tttttcctaatagcaggctgcgattcagcaagtttatggcaggccctttc
tctgccttggtgttttgacaaatggcactccctgacacttttgacatgca
ccaaaatttggaagttatgcattaagaatccccaaacagaacctctaagg
aactgcttccaaaggcaatcaagaatgccagagcatccggcatcctcata
catgtgtgctcttaataaacaattctttattgcaatgaaattcactatat
tatagaacttaacctgtaagagcttacgatacagtgactttggtctgttt
ccggagtgtggagccctcactattacctaattatagtacatttctatcac
cttaaccccgtgctcattagcagctgctactcgcccatcctgcagcccct
ggcaaccgctcatctactttctgtttctatggatttgcttattttaggca
tgtcatataatccgaatcctgcagattggcatggagactctgtgtttgtc
ttgacttggtgcgatgtttccaggatcatccttgttgcagtggggtgtca
gctctgcttccgtcttctctatagctgagttcagttgtgtgctcacatct
cattttgtctacccactccctgattgttgggcaccgggctcctggcttgt
gagaaggtgatgctgtgtgtgtgagtgcccaaggtttcatggtgaatgtg
ggttttctgttctctgggcaca
gaattctgggtgctctggaggtagaatcttctgttataaagaattcttcc
ttgcagaatagccctaaatcagtagttttttattgaaccaggccacatca
ccaagtctggacaatttgcaggaagccgtgtacctgagaagtacgtgttt
gaattctcttaagatgtggttggtccattggtatttttaggaagcttttg
ttgttgtaattttgtctcctgtttttttttttctttttgagacagaccca
aaccctacaacacacactggcctggacctcactatatcactcaggcagac
cttgaactttctggtggttttcctgcctcagcctcctgaatgctgggatt
agaagacgtcatcctccagtttaacagctgttttctattatctcttaaca
gcagctgggctgaaggaagcttgtccacaattcctggacaagcactagct
gtaagtgcacttgtcaggttgcccaggattctccttaggtgagatggctt
ctgtgtagactggggcccaggcaatgctctcaaagctgaggtgggcccag
ctgaatggctttgaaaagctacagggattgttctaatgtcctgccaagac
cacagtgctaaaggaacttgattcaaagctcagacaaatatgcaagattt
aaggctttttgtacctaatactgaactgactttgtctcagcctaaaacgc
tgagaggtttgtgcccagctgaatagccataggaagccatacaagcttac
tgagcaagggcataaggagttggtcagtactataagctgttgtaccctta
tcggaaaacttggcagggaaacagaagtaagcagattctctggtgagtta
gagggtaagcttgggttacaaagtttcaggtaagccagatctacaagtaa
cattcctttgttaagaatggaaatggaatgtaagaaccaattgaccgaat
ggtggaggattttgatagtttgcattatatacagtgtcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67426006_67427066
seq2: B6Ng01-129B06.b_110_1169 (reverse)

seq1  TGTGCCCAAGAAAACAGAAAACCCACATCCACACTGAAACC-TGGGCACT  49
      ||||||| ||| |||||||||||||||| |||  ||||||| ||||||||
seq2  TGTGCCC-AGAGAACAGAAAACCCACATTCACCATGAAACCTTGGGCACT  49

seq1  CACACACACAGCATCACCCTCTCCACAGCCAGAGCCCCGGTGCCCAACAA  99
      |||||||||||||||||| ||||   ||||||   |||||||||||||||
seq2  CACACACACAGCATCACCTTCTCACAAGCCAGGAGCCCGGTGCCCAACAA  99

seq1  TCAGGGAGTGGGTAGACAAAATGAGATGTGAGCACACAACTGAACTCAGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAGTGGGTAGACAAAATGAGATGTGAGCACACAACTGAACTCAGC  149

seq1  TATAGAGAAGACGGAAGCAGAGCTGACA-CCCACTGCAACAAGGATGATC  198
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATAGAGAAGACGGAAGCAGAGCTGACACCCCACTGCAACAAGGATGATC  199

seq1  CTGGAAAACATCGCACCAAGTCAAGACAAACACAGAGTCTCCATGCCAAT  248
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGG-AAACATCGCACCAAGTCAAGACAAACACAGAGTCTCCATGCCAA-  247

seq1  TCTGCAGGATTCGGATTATATGACATGCCTAAAATAAGCAAATCCATAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGATTCGGATTATATGACATGCCTAAAATAAGCAAATCCATAGA  297

seq1  AACAGAAAGTAGATGAGCGGTTGCCAGGGGCTGCAGGATGGGCGAGTAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGTAGATGAGCGGTTGCCAGGGGCTGCAGGATGGGCGAGTAGC  347

seq1  AGCTGCTAATGAGCACGGGGTTAAGGTGATAGAAATGTACTATAATTAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTAATGAGCACGGGGTTAAGGTGATAGAAATGTACTATAATTAGG  397

seq1  TAATAGTGAGGGCTCCACACTCCGGAAACAGACCAAAGTCACTGTATCGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTGAGGGCTCCACACTCCGGAAACAGACCAAAGTCACTGTATCGT  447

seq1  AAGCTCTTACAGGTTAAGTTCTATAATATAGTGAATTTCATTGCAATAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTACAGGTTAAGTTCTATAATATAGTGAATTTCATTGCAATAAA  497

seq1  GAATTGTTTATTAAGAGCACACATGTATGAGGATGCCGGATGCTCTGGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTTATTAAGAGCACACATGTATGAGGATGCCGGATGCTCTGGCA  547

seq1  TTCTTGATTGCCTTTGGAAGCAGTTCCTTAGAGGTTCTGTTTGGGGATTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATTGCCTTTGGAAGCAGTTCCTTAGAGGTTCTGTTTGGGGATTC  597

seq1  TTAATGCATAACTTCCAAATTTTGGTGCATGTCAAAAGTGTCAGGGAGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCATAACTTCCAAATTTTGGTGCATGTCAAAAGTGTCAGGGAGTG  647

seq1  CCATTTGTCAAAACACCAAGGCAGAGAAAGGGCCTGCCATAAACTTGCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTCAAAACACCAAGGCAGAGAAAGGGCCTGCCATAAACTTGCTG  697

seq1  AATCGCAGCCTGCTATTAGGAAAAAGTAAAGCATTTTACTTCATATTCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCAGCCTGCTATTAGGAAAAAGTAAAGCATTTTACTTCATATTCTT  747

seq1  AAGTGCTTCCTAATAGTCTCCACTTACCTTTTTTTTCTGATTGCAAGGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTCCTAATAGTCTCCACTTACCTTTTTTTTCTGATTGCAAGGAG  797

seq1  ACTCACTAACAACAAAATTGATACAGACATCATTGAGTTAGCTTTCTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTAACAACAAAATTGATACAGACATCATTGAGTTAGCTTTCTGTC  847

seq1  ACTGTGATAAAGTACCTGAGATAATCAACTGATAAAGAAGAAAGGTTTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATAAAGTACCTGAGATAATCAACTGATAAAGAAGAAAGGTTTGT  897

seq1  TTAGACTCATGGTTCCAGAGCACATTGTGGTGGGAGTGTTGGCACAGGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTCATGGTTCCAGAGCACATTGTGGTGGGAGTGTTGGCACAGGAG  947

seq1  GCACGCTCACCTCATGGTGGCCAGGAAACAAAAAGAAAGTTAGAAAGAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCTCACCTCATGGTGGCCAGGAAACAAAAAGAAAGTTAGAAAGAGG  997

seq1  TTGGATTCCTAGTGTCCCCTGCTAGGGAACAGTATCCTCCCTGTGGCCTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCCTAGTGTCCCCTGCTAGGGAACAGTATCCTCCCTGTGGCCTC  1047

seq1  ACTTCCTGATGTT  1061
      |||||||||||||
seq2  ACTTCCTGATGTT  1060

seq1: chr11_67266532_67267537
seq2: B6Ng01-129B06.g_68_1058

seq1  GAATTCTGGGTGCTCTGGAGGTAGAATCTTCTGTTATAAAGAATTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTGCTCTGGAGGTAGAATCTTCTGTTATAAAGAATTCTTCC  50

seq1  TTGCAGAATAGCCCTAAATCAGTAGTTTTTTATTGAACCAGGCCACATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAATAGCCCTAAATCAGTAGTTTTTTATTGAACCAGGCCACATCA  100

seq1  CCAAGTCTGGACAATTTGCAGGAAGCCGTGTACCTGAGAAGTACGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTGGACAATTTGCAGGAAGCCGTGTACCTGAGAAGTACGTGTTT  150

seq1  GAATTCTCTTAAGATGTGGTTGGTCCATTGGTATTTTTAGGAAGCTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAAGATGTGGTTGGTCCATTGGTATTTTTAGGAAGCTTTTG  200

seq1  TTGTTGTAATTTTGTCTCCTGTTTTTTTTTTTCTTTTTGAGACAGACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTAATTTTGTCTCCTGTTTTTTTTTTTCTTTTTGAGACAGACCCA  250

seq1  AACCCTACAACACACACTGGCCTGGACCTCACTATATCACTCAGGCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTACAACACACACTGGCCTGGACCTCACTATATCACTCAGGCAGAC  300

seq1  CTTGAACTTTCTGGTGGTTTTCCTGCCTCAGCCTCCTGAATGCTGGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACTTTCTGGTGGTTTTCCTGCCTCAGCCTCCTGAATGCTGGGATT  350

seq1  AGAAGACGTCATCCTCCAGTTTAACAGCTGTTTTCTATTATCTCTTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACGTCATCCTCCAGTTTAACAGCTGTTTTCTATTATCTCTTAACA  400

seq1  GCAGCTGGGCTGAAGGAAGCTTGTCCACAATTCCTGGACAAGCACTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGGCTGAAGGAAGCTTGTCCACAATTCCTGGACAAGCACTAGCT  450

seq1  GTAAGTGCACTTGTCAGGTTGCCCAGGATTCTCCTTAGGTGAGATGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGCACTTGTCAGGTTGCCCAGGATTCTCCTTAGGTGAGATGGCTT  500

seq1  CTGTGTAGACTGGGGCCCAGGCAATGCTCTCAAAGCTGAGGTGGGCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGACTGGGGCCCAGGCAATGCTCTCAAAGCTGAGGTGGGCCCAG  550

seq1  CTGAATGGCTTTGAAAAGCTACAGGGATTGTTCTAATGTCCTGCCAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGGCTTTGAAAAGCTACAGGGATTGTTCTAATGTCCTGCCAAGAC  600

seq1  CACAGTGCTAAAGGAACTTGATTCAAAGCTCAGACAAATATGCAAGAATT  650
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACAGTGCTAAAGGAACTTGATTCAAAGCTCAGACAAATATGCAAG-ATT  649

seq1  TAAGGCTTTTTGTACCTAATACTGAACTGACTTTGTCTCAGCCTAAAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTTTTTGTACCTAATACTGAACTGACTTTGTCTCAGCCTAAAACG  699

seq1  CTGAGAGGTTTGTGCCCAGCTGAATAGCCATAGGAAGCCATACAAGCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGTTTGTGCCCAGCTGAATAGCCATAGGAAGCCATACAAGCTTA  749

seq1  CTGAGCAAGGGGCATAAGGAGTTGGTCAGTACTATAAGCTG-TGTACCCC  799
      |||||||| |||||||||||||||||||||||||||||||| |||| |||
seq2  CTGAGCAA-GGGCATAAGGAGTTGGTCAGTACTATAAGCTGTTGTA-CCC  797

seq1  TTATCGGAAAAACTTGGCA-GGAAACAGAAGTAGGCAGA-TCTCT-GTGA  846
      ||||||| ||||||||||| ||||||||||||| ||||| ||||| ||||
seq2  TTATCGG-AAAACTTGGCAGGGAAACAGAAGTAAGCAGATTCTCTGGTGA  846

seq1  GTTAAGAGGTAAGCCTGGTTTACATAGTTTCAGGTAAGCCAGAGCTACAT  896
      ||||   ||||||| ||| ||||| |||||||||||||||||| ||||| 
seq2  GTTAGAGGGTAAGCTTGGGTTACAAAGTTTCAGGTAAGCCAGATCTACA-  895

seq1  AGTAACATTCCCTTGTTTAAGAATGGGGAAATGGGAAGTAAAGAAACAGA  946
      ||||||||||| ||| ||||||||  |||||||| | || ||||| |   
seq2  AGTAACATTCCTTTG-TTAAGAAT--GGAAATGGAATGT-AAGAACC---  938

seq1  AATGGGACCGAAAATGTTGAGGATTTTGTAATGTTTGCATATACATAATA  996
      |||  ||||| ||  || |||||||||| |  |||||||| ||    |||
seq2  AAT-TGACCG-AATGGTGGAGGATTTTG-ATAGTTTGCAT-TA---TATA  981

seq1  CAGTGTCTTG  1006
      ||||||||||
seq2  CAGTGTCTTG  991