BAC Information

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BAC

Clone NameB6Ng01-129E03
Chromosome11 (Build37)
Map Location 10,369,499 - 10,505,366
singlet/doubletdoublet
Overlap genenone
Upstream geneAbca13, LOC665435, LOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129E03.bB6Ng01-129E03.g
ACCDH930892DH930893
length978954
definitionDH930892|Mus musculus domesticus DNA, BAC clone: B6Ng01-129E03, 5' end.DH930893|Mus musculus domesticus DNA, BAC clone: B6Ng01-129E03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,504,801 - 10,505,366)(10,369,499 - 10,370,311)
sequence
gaattcccattaacaaagttctctgtagtaagtgtttacttcagaggaac
ttactgtattggcctatcagtagttgtcatttttttttctaatgttgtga
cacttaaatagtttctcatgttgttctggtcccaaattataaaattattt
ttgatgttacaacaactatgattttgttagtgttatgagtcgtagtataa
atagggtcttaggtgacccctgtgaaaagaacatttgaccccaagttgtc
acaacccacaggttgaaaaatactgacttattttatcttataacttgcaa
ataacttagattttagggttagatatacaattgagttcaattattaatgt
attgagtattttacaacctactaggggaccacaaagcatttcaaaataac
ttccctgtagttttgtattattgtgtcaggaatgcttactatgagaatta
cccacaagatgtttaaatgtagaagtaatacactttaaccacattattaa
cctctagacatggttcattttgcatagctgaagcttcatgcatgtgcttc
agtcataaagaagtcactccctcttttacagcaattcttgtaagatatct
ttcaatgctgtatatctatgaaatgattttaaatacttcacatgcatggg
atagttgcttttactcttttgatgccggtttcctaacctcaatatactgt
cttctaggcatagtcatgttctcagacatagcagaaagttttcagttata
tactttgagaaaattacattatatgtatgtcatattttctaaaagaagga
aaccaatctcaaaatggcattcaataaatggttcccattatttgaaatca
gagaaaaaggaaaacagtgaagatgggagaaatgtttggttgtttgtgaa
gagggaagggtgaacaggaatggatataggatagaaggtatcatctttta
gggctttgagatacttggcataacaggt
gaattcttatgaaagaaactatttaattagaggcttgcttacaattttag
aggctgattccattttcatcatgcagggaccctggtggtactcatggctt
tggagcaatacctacctggaagttacatcctgtccagaggcagataaaga
gtccctgggcttggcaagaacttttgaaacttcaaagcccaccctcagtg
atacaattccttgaacaaggtcacacttcttagtcctttcaaagaatacc
actcacttcctggagaccaatcattcaaatctatgagaatgtagttaaaa
tctattcaaatctaatgagaacagctccaacatgaggtcctatatttgta
gcttactgcccagtttgtaaactatttggaagcattatgaatatactatt
gtttaagaaagtgtgtccctcggagtgggcttttaggtttccaaggacca
tgccaggctcagtgtttggaactctgcctgctgttatagatcagggtgaa
atgttatcagctatttttctactacaatgcttatctccttaccactatta
tccacatcctctaaaactacaagcaagcatttatatccatttttcattag
attccttgatcatgttgtcttttcacagcaatagaatattaactgagaca
gaaattggtaccagagagtggagtattgctgtgacaggcctgcccaggtt
gttgtttggaggaatgtggaagactgaaaatttggactagaaaaaaatga
tgattgaacaccttaaatggggattaatgggcctttctattagaagcaag
aaagattttggtactgacagtgatgtggactgttaggaccagctcagagg
tttcagcaggattattttcggctagcataaagaacaatctatattttgtt
gagatgtgtctgcttttgcccttatcttaaagttgcagagaaagttcaaa
gctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10504801_10505366
seq2: B6Ng01-129E03.b_49_614 (reverse)

seq1  TGACTTCTTTATGACTGAAGCACATGCATGAAGCTTCAGCTATGCAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTTTATGACTGAAGCACATGCATGAAGCTTCAGCTATGCAAAAT  50

seq1  GAACCATGTCTAGAGGTTAATAATGTGGTTAAAGTGTATTACTTCTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATGTCTAGAGGTTAATAATGTGGTTAAAGTGTATTACTTCTACAT  100

seq1  TTAAACATCTTGTGGGTAATTCTCATAGTAAGCATTCCTGACACAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATCTTGTGGGTAATTCTCATAGTAAGCATTCCTGACACAATAAT  150

seq1  ACAAAACTACAGGGAAGTTATTTTGAAATGCTTTGTGGTCCCCTAGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTACAGGGAAGTTATTTTGAAATGCTTTGTGGTCCCCTAGTAGG  200

seq1  TTGTAAAATACTCAATACATTAATAATTGAACTCAATTGTATATCTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATACTCAATACATTAATAATTGAACTCAATTGTATATCTAACC  250

seq1  CTAAAATCTAAGTTATTTGCAAGTTATAAGATAAAATAAGTCAGTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCTAAGTTATTTGCAAGTTATAAGATAAAATAAGTCAGTATTTT  300

seq1  TCAACCTGTGGGTTGTGACAACTTGGGGTCAAATGTTCTTTTCACAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGTGGGTTGTGACAACTTGGGGTCAAATGTTCTTTTCACAGGGG  350

seq1  TCACCTAAGACCCTATTTATACTACGACTCATAACACTAACAAAATCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAAGACCCTATTTATACTACGACTCATAACACTAACAAAATCATA  400

seq1  GTTGTTGTAACATCAAAAATAATTTTATAATTTGGGACCAGAACAACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTAACATCAAAAATAATTTTATAATTTGGGACCAGAACAACATG  450

seq1  AGAAACTATTTAAGTGTCACAACATTAGAAAAAAAAATGACAACTACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTATTTAAGTGTCACAACATTAGAAAAAAAAATGACAACTACTGA  500

seq1  TAGGCCAATACAGTAAGTTCCTCTGAAGTAAACACTTACTACAGAGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCAATACAGTAAGTTCCTCTGAAGTAAACACTTACTACAGAGAACT  550

seq1  TTGTTAATGGGAATTC  566
      ||||||||||||||||
seq2  TTGTTAATGGGAATTC  566

seq1: chr11_10369499_10370311
seq2: B6Ng01-129E03.g_68_880

seq1  GAATTCTTATGAAAGAAACTATTTAATTAGAGGCTTGCTTACAATTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAAAGAAACTATTTAATTAGAGGCTTGCTTACAATTTTAG  50

seq1  AGGCTGATTCCATTTTCATCATGCAGGGACCCTGGTGGTACTCATGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATTCCATTTTCATCATGCAGGGACCCTGGTGGTACTCATGGCTT  100

seq1  TGGAGCAATACCTACCTGGAAGTTACATCCTGTCCAGAGGCAGATAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAATACCTACCTGGAAGTTACATCCTGTCCAGAGGCAGATAAAGA  150

seq1  GTCCCTGGGCTTGGCAAGAACTTTTGAAACTTCAAAGCCCACCCTCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGGGCTTGGCAAGAACTTTTGAAACTTCAAAGCCCACCCTCAGTG  200

seq1  ATACAATTCCTTGAACAAGGTCACACTTCTTAGTCCTTTCAAAGAATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTCCTTGAACAAGGTCACACTTCTTAGTCCTTTCAAAGAATACC  250

seq1  ACTCACTTCCTGGAGACCAATCATTCAAATCTATGAGAATGTAGTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTCCTGGAGACCAATCATTCAAATCTATGAGAATGTAGTTAAAA  300

seq1  TCTATTCAAATCTAATGAGAACAGCTCCAACATGAGGTCCTATATTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCAAATCTAATGAGAACAGCTCCAACATGAGGTCCTATATTTGTA  350

seq1  GCTTACTGCCCAGTTTGTAAACTATTTGGAAGCATTATGAATATACTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTGCCCAGTTTGTAAACTATTTGGAAGCATTATGAATATACTATT  400

seq1  GTTTAAGAAAGTGTGTCCCTCGGAGTGGGCTTTTAGGTTTCCAAGGACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGAAAGTGTGTCCCTCGGAGTGGGCTTTTAGGTTTCCAAGGACCA  450

seq1  TGCCAGGCTCAGTGTTTGGAACTCTGCCTGCTGTTATAGATCAGGGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCTCAGTGTTTGGAACTCTGCCTGCTGTTATAGATCAGGGTGAA  500

seq1  ATGTTATCAGCTATTTTTCTACTACAATGCTTATCTCCTTACCACTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATCAGCTATTTTTCTACTACAATGCTTATCTCCTTACCACTATTA  550

seq1  TCCACATCCTCTAAAACTACAAGCAAGCATTTATATCCATTTTTCATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCTAAAACTACAAGCAAGCATTTATATCCATTTTTCATTAG  600

seq1  ATTCCTTGATCATGTTGTCTTTTCACAGCAATAGAATATTAACTGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGATCATGTTGTCTTTTCACAGCAATAGAATATTAACTGAGACA  650

seq1  GAAATTGGTACCAGAGAGTGGAGTATTGCTGTGACAGGCCTGCCCAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGGTACCAGAGAGTGGAGTATTGCTGTGACAGGCCTGCCCAGGTT  700

seq1  GTTGTTTGGAGGAATGTGGAAGACTGAAAATTTGGACTAGAAAAAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGGAGGAATGTGGAAGACTGAAAATTTGGACTAGAAAAAAATGA  750

seq1  TGATTGAACACCTTAAATGGGGATTAATGGGCCTTTCTATTAGAAGCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAACACCTTAAATGGGGATTAATGGGCCTTTCTATTAGAAGCAAG  800

seq1  AAAGATTTTGGTA  813
      |||||||||||||
seq2  AAAGATTTTGGTA  813