BAC Information

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BAC

Clone NameB6Ng01-133J04
Chromosome11 (Build37)
Map Location 56,541,570 - 56,608,723
singlet/doubletdoublet
Overlap genenone
Upstream geneNmur2, LOC100040816, LOC624168
Downstream geneGria1, LOC667878, 1810073G14Rik, Mfap3, Galnt10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133J04.bB6Ng01-133J04.g
ACCDH934084DH934085
length1,17063
definitionDH934084|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J04, 5' end.DH934085|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,541,570 - 56,542,763)(56,608,661 - 56,608,723)
sequence
gaattcttacctacctagcatcccttgtcctttgtttgcttttgtttctg
tcccgtccgggaggggggggcacagcaatccatctcctcttatgcaggat
ccaggacttgcttacttactggataatttagtttgtactgactgagccct
tgataaatgtgcactgtcattgagagctaacactcaagtccctagcaatg
aggcttgaatttgaacaacagtgaaattaaagatcatttcagacaattat
gcaatgagagccagagtgtcttgtgttctccgaagcccaggaaataagta
aacagataagcaactgactcagacagatgctgttgtcaccttgccaagcg
ccacactgtcaaggaagacatctgacattattctgaactttgtcccattt
gtttgctaaactccgaacaacaagtaactttcccggacatctgagctggt
ccgttgtgggcagcagtagctgtcaagggactgtggatggattgaaatca
tccacatgtgggtgaaaaaaaccaacttctaatgatggcaaagtccccac
aggaccacctagtggaagtgcagctgggagatcagaccaacttagccttt
ctgctcctttttcatgcgcagtgatgccaatccacatgaaatatagatga
gttcccagcaagagtgagggctccagctcattttcctcctgcattggatg
agactaagtcttccaggaactcagggtgtgcaaacagggctgccacccac
cttcataggagatgctggctgtgagctcagactgcagctgtctttgatct
cagtggaaagtcaactgttagatctactgcacaaaaccctcaggctagaa
aattagccagtccttctttaaccttgactctgctaagccccagaaacaga
cacagctgacatgaaactcaacataaacattaagacataaaggtggccat
tgcagtgtgtcagcttgttgtgtaaagatgctcacgctactagctaacct
tctgtagagtagaagctagaaagcatttataaaacaggtcccacctatcc
atctgtgttcttttgttctagctaaatatctgctagtatgaaaaatcaaa
tcagtaccagagtctcagctaaactggatctgagtgctggtcttaggcta
gcaactgagaatagtcgtga
atgcatggacaggtaaatggataagtgggtggatgcttggatggataagt
gaacaaatggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_56541570_56542763
seq2: B6Ng01-133J04.b_49_1218

seq1  GAATTCTTACCTACCTAGCATCCCTTGTCCTTTGTTTGCTTTTGTTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTACCTAGCATCCCTTGTCCTTTGTTTGCTTTTGTTTCTG  50

seq1  TCCCGTCCGGGAGGGGGGGGCACAGCAATCCATCTCCTCTTATGCAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTCCGGGAGGGGGGGGCACAGCAATCCATCTCCTCTTATGCAGGAT  100

seq1  CCAGGACTTGCTTACTTACTGGATAATTTAGTTTGTACTGACTGAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTTGCTTACTTACTGGATAATTTAGTTTGTACTGACTGAGCCCT  150

seq1  TGATAAATGTGCACTGTCATTGAGAGCTAACACTCAAGTCCCTAGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATGTGCACTGTCATTGAGAGCTAACACTCAAGTCCCTAGCAATG  200

seq1  AGGCTTGAATTTGAACAACAGTGAAATTAAAGATCATTTCAGACAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGAATTTGAACAACAGTGAAATTAAAGATCATTTCAGACAATTAT  250

seq1  GCAATGAGAGCCAGAGTGTCTTGTGTTCTCCGAAGCCCAGGAAATAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGAGCCAGAGTGTCTTGTGTTCTCCGAAGCCCAGGAAATAAGTA  300

seq1  AACAGATAAGCAACTGACTCAGACAGATGCTGTTGTCACCTTGCCAAGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATAAGCAACTGACTCAGACAGATGCTGTTGTCACCTTGCCAAGCG  350

seq1  CCACACTGTCAAGGAAGACATCTGACATTATTCTGAACTTTGTCCCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGTCAAGGAAGACATCTGACATTATTCTGAACTTTGTCCCATTT  400

seq1  GTTTGCTAAACTCCGAACAACAAGTAACTTTCCCGGACATCTGAGCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAAACTCCGAACAACAAGTAACTTTCCCGGACATCTGAGCTGGT  450

seq1  CCGTTGTGGGCAGCAGTAGCTGTCAAGGGACTGTGGATGGATTGAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGTGGGCAGCAGTAGCTGTCAAGGGACTGTGGATGGATTGAAATCA  500

seq1  TCCACATGTGGGTGAAAAAAACCAACTTCTAATGATGGCAAAGTCCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGTGGGTGAAAAAAACCAACTTCTAATGATGGCAAAGTCCCCAC  550

seq1  AGGACCACCTAGTGGAAGTGCAGCTGGGAGATCAGACCAACTTAGCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACCTAGTGGAAGTGCAGCTGGGAGATCAGACCAACTTAGCCTTT  600

seq1  CTGCTCCTTTTTCATGCGCAGTGATGCCAATCCACATGAAATATAGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTTTTTCATGCGCAGTGATGCCAATCCACATGAAATATAGATGA  650

seq1  GTTCCCAGCAAGAGTGAGGGCTCCAGCTCATTTTCCTCCTGCATTGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGCAAGAGTGAGGGCTCCAGCTCATTTTCCTCCTGCATTGGATG  700

seq1  AGACTAAGTCTTCCAGGAACTCAGGGTGTGCAAACAGGGCTGCCACCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAGTCTTCCAGGAACTCAGGGTGTGCAAACAGGGCTGCCACCCAC  750

seq1  CTTCATAGGAGATGCTGGCTGTGAGCTCAGACTGCAGCTGTCTTTGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGGAGATGCTGGCTGTGAGCTCAGACTGCAGCTGTCTTTGATCT  800

seq1  CAGTGGAAAGTCAACTGTTAGATCTACTGCACAAAACCCTCAGGCTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAAGTCAACTGTTAGATCTACTGCACAAAACCCTCAGGCTAGAA  850

seq1  AATTAGCCAGTCCTTCTTTAACCTTGACTCTGCTAAGCCCCAGAAACAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCCAGTCCTTCTTTAACCTTGACTCTGCTAAGCCCCAGAAACAGA  900

seq1  CACAGCTGACATGAAACTCAACATAAACATTAAGACATAAAGGTGGCCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGACATGAAACTCAACATAAACATTAAGACATAAAGGTGGCCAT  950

seq1  TGCAGTGTGTCAGCTTGTTGTGTAAAGATGCTCACGCTAACTAGCTAACC  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCAGTGTGTCAGCTTGTTGTGTAAAGATGCTCACGCT-ACTAGCTAACC  999

seq1  TTCTGTAGAGTAGAAGCTAGAAAGGCATTTATTAAAACAGGGTTCCCACC  1050
      ||||||||||||||||||||||| ||||||| |||||||||  |||||||
seq2  TTCTGTAGAGTAGAAGCTAGAAA-GCATTTA-TAAAACAGG--TCCCACC  1045

seq1  TATCCATCTGTGTATCTTTTGTTTCTAGCTTAAATATTCTTGGTTAAGTT  1100
      ||||||||||||| ||||||| ||||||| |||||| |||  | ||   |
seq2  TATCCATCTGTGT-TCTTTTG-TTCTAGC-TAAATA-TCT--GCTA--GT  1087

seq1  ATGAAAAATTCAAATCAGTACCAAGAAGTCTCAAGCTAAACCTTGAATTC  1150
      |||||||| ||||||||||||||   |||||| ||||||||  || | ||
seq2  ATGAAAAA-TCAAATCAGTACCA--GAGTCTC-AGCTAAAC--TGGA-TC  1130

seq1  TGAGTGCTGGGTCTTAAGGCCTAGCTACTGAAGAATAGTCGTGA  1194
      |||||||| |||||||  | ||||| |||| |||||||||||||
seq2  TGAGTGCT-GGTCTTA--GGCTAGCAACTG-AGAATAGTCGTGA  1170

seq1: chr11_56608661_56608723
seq2: B6Ng01-133J04.g_74_136 (reverse)

seq1  AGACCATTTGTTCACTTATCCATCCAAGCATCCACCCACTTATCCATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTTGTTCACTTATCCATCCAAGCATCCACCCACTTATCCATTTA  50

seq1  CCTGTCCATGCAT  63
      |||||||||||||
seq2  CCTGTCCATGCAT  63