BAC Information

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BAC

Clone NameB6Ng01-133N11
Chromosome11 (Build37)
Map Location 64,976,717 - 65,104,831
singlet/doubletdoublet
Overlap geneLOC100041790, Myocd
Upstream geneEG544785, Hs3st3a1, LOC626959, Elac2, AU040829, 1700086D15Rik
Downstream geneMap2k4, Zkscan6, Dnahc9, Gm879
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133N11.bB6Ng01-133N11.g
ACCDH934288DH934289
length1,155419
definitionDH934288|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N11, 5' end.DH934289|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,976,717 - 64,977,882)(65,104,407 - 65,104,831)
sequence
gaattcatatgaagatatgttaggcagatgtgttcgttaaattgtataaa
gtcaccttattggtgttcaatcacagtgttaagcttgggacaaaggggtt
tcgaactaggcgtagcatgcatcccaaaatgccatccttaatctttttca
aacccagtaagtaaccaaaagtttacataagattgaatcagtaacgtctt
gtctactagcacaacctgagacagctttcttgtatgatttagattctatt
accatagctatgtccatctccttaccgccactagacctgaaatggtatca
gctgggcagcccactggcatttaccagctggttgaaagaaattgtggctc
attagacttggaaggtggcaggtgagggggacagcaaatggctcaatagg
taaagaagcctattgacctgtgttcagtgtctagaacatacacggtagga
gaaaattaactcctgcatgttgtcttacgtacacacacactaaataaata
taaataatgtaaaaaaaagaaagaaaatcacatgtgatctcaattagttg
tcatctttatatatatcaagtcagagttgttgggcagtagagacattgga
tcaaacaaatgtgagtcttcccattagaatctcacatatttaatcagcaa
ttttaggaaaactgctgggactctctcatctccagcttccctatctcaag
tagaaagcactgctgtttggtagatggaaatgaaagagtgctgttttcca
aatctaactacatacaggctatcatgtagtccactgtggcagatacaatg
gaagatagcataatgggaaaatccaggatcattcctattatgaaaatagt
ttaaaaaaaaaaaaaaaggaagagcatccatctatgacccgagattctct
gcagtgtgttgattacagtagaaagatgccctaaatatggatgtaagtgt
cttactggccagcggaacaaatgatggttgaggcatgttttggctgaatg
aacatgaaatctttaataattgtgagctcagctctgctataggtcaagag
ttctggtcaattagcagtgaggcatcgtgcttgtgactgacttgtatgtg
caacatacagtcatgtcaacggtcaggtataaacaagtactcctatttga
gtttt
ctgagaggtcagagtatttaaaaaaaaatggctgaagaaccgaaagaaag
ttatcctgaactggaaaaaggtaggagtctttttagtttgaaagtgttcg
ctgagtattatataagctgaaacctatctctctctctctctctctctctc
tctctctctctcacacacacacacacacacacacacacacacatatatat
atatatagtcaatttttagggaaaaatttcccatgcgcatccagctactt
taaagatttaacaaaaagaatccaagtctacacctgtcttagttactgtt
ctattgctgtgaacagacaccatgaccaaggcaactcttaccaaagaaag
cattgaaggcttgcttgcagtttctgagggttagttgctcatcatcatgg
gttgtttgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64976717_64977882
seq2: B6Ng01-133N11.b_49_1203

seq1  GAATTCATATGAAGATATGTTAGGCAGATGTGTTCGTTAAATTGTATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGAAGATATGTTAGGCAGATGTGTTCGTTAAATTGTATAAA  50

seq1  GTCACCTTATTGGTGTTCAATCACAGTGTTAAGCTTGGGACAAAGGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTATTGGTGTTCAATCACAGTGTTAAGCTTGGGACAAAGGGGTT  100

seq1  TCGAACTAGGCGTAGCATGCATCCCAAAATGCCATCCTTAATCTTTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTAGGCGTAGCATGCATCCCAAAATGCCATCCTTAATCTTTTTCA  150

seq1  AACCCAGTAAGTAACCAAAAGTTTACATAAGATTGAATCAGTAACGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTAAGTAACCAAAAGTTTACATAAGATTGAATCAGTAACGTCTT  200

seq1  GTCTACTAGCACAACCTGAGACAGCTTTCTTGTATGATTTAGATTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTAGCACAACCTGAGACAGCTTTCTTGTATGATTTAGATTCTATT  250

seq1  ACCATAGCTATGTCCATCTCCTTACCGCCACTAGACCTGAAATGGTATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGCTATGTCCATCTCCTTACCGCCACTAGACCTGAAATGGTATCA  300

seq1  GCTGGGCAGCCCACTGGCATTTACCAGCTGGTTGAAAGAAATTGTGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCAGCCCACTGGCATTTACCAGCTGGTTGAAAGAAATTGTGGCTC  350

seq1  ATTAGACTTGGAAGGTGGCAGGTGAGGGGGACAGCAAATGGCTCAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTTGGAAGGTGGCAGGTGAGGGGGACAGCAAATGGCTCAATAGG  400

seq1  TAAAGAAGCCTATTGACCTGTGTTCAGTGTCTAGAACATACACGGTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCCTATTGACCTGTGTTCAGTGTCTAGAACATACACGGTAGGA  450

seq1  GAAAATTAACTCCTGCATGTTGTCTTACGTACACACACACTAAATAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAACTCCTGCATGTTGTCTTACGTACACACACACTAAATAAATA  500

seq1  TAAATAATGTAAAAAAAAGAAAGAAAATCACATGTGATCTCAATTAGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATGTAAAAAAAAGAAAGAAAATCACATGTGATCTCAATTAGTTG  550

seq1  TCATCTTTATATATATCAAGTCAGAGTTGTTGGGCAGTAGAGACATTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTATATATATCAAGTCAGAGTTGTTGGGCAGTAGAGACATTGGA  600

seq1  TCAAACAAATGTGAGTCTTCCCATTAGAATCTCACATATTTAATCAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAAATGTGAGTCTTCCCATTAGAATCTCACATATTTAATCAGCAA  650

seq1  TTTTAGGAAAACTGCTGGGACTCTCTCATCTCCAGCTTCCCTATCTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAAAACTGCTGGGACTCTCTCATCTCCAGCTTCCCTATCTCAAG  700

seq1  TAGAAAGCACTGCTGTTTGGTAGATGGAAATGAAAGAGTGCTGTTTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCACTGCTGTTTGGTAGATGGAAATGAAAGAGTGCTGTTTTCCA  750

seq1  AATCTAACTACATACAGGCTATCATGTAGTCCACTGTGGCAGATACAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAACTACATACAGGCTATCATGTAGTCCACTGTGGCAGATACAATG  800

seq1  GAAGATAGCATAATGGGAAAATCCAGGATCATTCCTATTATGAAAATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGCATAATGGGAAAATCCAGGATCATTCCTATTATGAAAATAGT  850

seq1  TTAAAAAAAAAAAAAAAGGAAGAGCATCCATCTATGACCCGAGATTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAAAAAAAGGAAGAGCATCCATCTATGACCCGAGATTCTCT  900

seq1  GCAGTGTGTTGATTACAGTAGAAAGATGCCCTAAATATGGATGTAAGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGTTGATTACAGTAGAAAGATGCCCTAAATATGGATGTAAGTGT  950

seq1  CTTACTGGCCAGCGGAACAAATGATGGTTTGAGGCATGTTTTGGCTGAAT  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTACTGGCCAGCGGAACAAATGATGG-TTGAGGCATGTTTTGGCTGAAT  999

seq1  GAACATGAAATCTTTAATTAATTGTGAGCTCAGCCTCTGCTTATTAGGTC  1050
      ||||||||||||||||| ||||||||||||||| |||||||   ||||||
seq2  GAACATGAAATCTTTAA-TAATTGTGAGCTCAG-CTCTGCT--ATAGGTC  1045

seq1  AAGAGTTCTGGTCAATTAGCAGTGAAGGCATCGTGCTTGTGACTGAC-TG  1099
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  AAGAGTTCTGGTCAATTAGCAGTG-AGGCATCGTGCTTGTGACTGACTTG  1094

seq1  TATGTGGCAACATACAGTCATGTCAAC-GTCATGTTTATATAAACAAAGT  1148
      ||||| ||||||||||||||||||||| |||| |    ||||||| ||||
seq2  TATGT-GCAACATACAGTCATGTCAACGGTCAGG----TATAAAC-AAGT  1138

seq1  ACTTCTATTTTGAGTTTT  1166
      ||| ||| ||||||||||
seq2  ACTCCTA-TTTGAGTTTT  1155

seq1: chr11_65104407_65104831
seq2: B6Ng01-133N11.g_70_494 (reverse)

seq1  CCCCCCCCCCCCAAACAACCCATGATGATGAGCAACTAACCCTCAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCAAACAACCCATGATGATGAGCAACTAACCCTCAGAAAC  50

seq1  TGCAAGCAAGCCTTCAATGCTTTCTTTGGTAAGAGTTGCCTTGGTCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCAAGCCTTCAATGCTTTCTTTGGTAAGAGTTGCCTTGGTCATGG  100

seq1  TGTCTGTTCACAGCAATAGAACAGTAACTAAGACAGGTGTAGACTTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTCACAGCAATAGAACAGTAACTAAGACAGGTGTAGACTTGGAT  150

seq1  TCTTTTTGTTAAATCTTTAAAGTAGCTGGATGCGCATGGGAAATTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTTAAATCTTTAAAGTAGCTGGATGCGCATGGGAAATTTTTCC  200

seq1  CTAAAAATTGACTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATTGACTATATATATATATATGTGTGTGTGTGTGTGTGTGTGTG  250

seq1  TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGGTTT  300

seq1  CAGCTTATATAATACTCAGCGAACACTTTCAAACTAAAAAGACTCCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTATATAATACTCAGCGAACACTTTCAAACTAAAAAGACTCCTACC  350

seq1  TTTTTCCAGTTCAGGATAACTTTCTTTCGGTTCTTCAGCCATTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAGTTCAGGATAACTTTCTTTCGGTTCTTCAGCCATTTTTTTTT  400

seq1  AAATACTCTGACCTCTCAGGAATTC  425
      |||||||||||||||||||||||||
seq2  AAATACTCTGACCTCTCAGGAATTC  425