BAC Information

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BAC

Clone NameB6Ng01-136J12
Chromosome11 (Build37)
Map Location 92,031,377 - 92,032,515
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664976, Kif2b
Downstream geneLOC382545, LOC100039286, Car10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136J12.bB6Ng01-136J12.g
ACCDH936328DH936329
length1,135253
definitionDH936328|Mus musculus domesticus DNA, BAC clone: B6Ng01-136J12, 5' end.DH936329|Mus musculus domesticus DNA, BAC clone: B6Ng01-136J12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaacacaaaggtgaggcaatgtttctgttttatcttaaacct
ggaaatacattgactaacatttcaaatatttactggcattcagaggaata
tctccttactcagatgagaatcagtattctgtcctgctctgaccatgaac
tcactagccaggtaccaccacactggaaaggaagtctcctctactagttc
taaaaattagtccacctaataataccccataggcacccttgggataatgt
ttatccaaataccttctcagtcataacagtcaaattgatcccaataaatg
ccagtgagtgataattagtgttttcattctgacagtgaacattctggtac
ggttttactttgttataatttctagccatgggaatgacctttgaagtatt
gagcatttccttgggaattaattgctatgctagggttaatggcccacagc
aatggactttctgagacagtcattaatcttccttgattattactgctaat
tactaacttaagtctcctcattggcatataagttaagtatctcatctcaa
cctttcccagttgaaaatgtccatgatttttctgatcacatataaatatg
ggttgaaaaagggaggcacattaagatcacaacaagcacccatactgact
gataataatatttttaaatcaatactgcattacttacaaagcttcttctg
attataaaattaagatagttataaaagtaatttcatatattcataaacat
aaaatggaacaaacactttatatttttatcaccagaataaagaactaatg
cattatggatattgccttcatcttatctcaatagttttctgtctctaact
gtgtatttatataaaattttagcttgaagccattattatagaaaaaggtt
gttctatttttttaacatttatttcctatgcagtgctgtcttttatgaga
tcattcagcgaaatgaagtgtaaacttttatacattatttcatttagagt
ttcgtcacacccttattcagaatttaaaataagcatgtaagctctgccaa
ataaaacatgtttgagatgtcatgcacatttgttgtaatttttgcaaaag
aaacactactttttctttatctagccaaaaataaa
aaaaaggtcaacaagctgaagggccaagtggggaagcatcagtctcactt
ggaagggagaagaaagcaaccacaaggagggagggaaggacctgggaggg
aaaggagtcaaaaggggtggggtgaaaggggaacatgatctggtattggg
tggaggaaaggggctgaagccctgagacccagcagaaagaacataaacag
tcaacctagggaggtaggaggttggggggaccctccggaatgtatctttt
tcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92031377_92032515
seq2: B6Ng01-136J12.b_50_1184 (reverse)

seq1  TTTATTTTTGGCTAGAT-AAGGAAAAGTAGTGTTTCTTTATGCAAAACAT  49
      ||||||||||||||||| ||| ||||||||||||||||| |||||||  |
seq2  TTTATTTTTGGCTAGATAAAGAAAAAGTAGTGTTTCTTT-TGCAAAAATT  49

seq1  ACAACAAATGTTGCATGACATCTTCAAACATGTTTTTATTTTGGCAGAGC  99
      |||||||||| ||||||||||| |||||||||||||   |||||||||||
seq2  ACAACAAATG-TGCATGACATC-TCAAACATGTTTT--ATTTGGCAGAGC  95

seq1  TTACATGCTTATTTTAAATTCTGAAT-AGGGTGTGACGAAACTCTAAATG  148
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTACATGCTTATTTTAAATTCTGAATAAGGGTGTGACGAAACTCTAAATG  145

seq1  AAATAATTGTATAAAAGTTTACACTTCATTTCGCTGAATGATCTCATAAA  198
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAA-TGTATAAAAGTTTACACTTCATTTCGCTGAATGATCTCATAAA  194

seq1  AGACAGCACTGCATAGGAAATAAATGTTAAAAAAATAGAACAACCTTTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCACTGCATAGGAAATAAATGTTAAAAAAATAGAACAACCTTTTT  244

seq1  CTATAATAATGGCTTCAAGCTAAAATTTTATATAAATACACAGTTAGAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATAATGGCTTCAAGCTAAAATTTTATATAAATACACAGTTAGAGA  294

seq1  CAGAAAACTATTGAGATAAGATGAAGGCAATATCCATAATGCATTAGTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACTATTGAGATAAGATGAAGGCAATATCCATAATGCATTAGTTC  344

seq1  TTTATTCTGGTGATAAAAATATAAAGTGTTTGTTCCATTTTATGTTTATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGGTGATAAAAATATAAAGTGTTTGTTCCATTTTATGTTTATG  394

seq1  AATATATGAAATTACTTTTATAACTATCTTAATTTTATAATCAGAAGAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGAAATTACTTTTATAACTATCTTAATTTTATAATCAGAAGAAG  444

seq1  CTTTGTAAGTAATGCAGTATTGATTTAAAAATATTATTATCAGTCAGTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAAGTAATGCAGTATTGATTTAAAAATATTATTATCAGTCAGTAT  494

seq1  GGGTGCTTGTTGTGATCTTAATGTGCCTCCCTTTTTCAACCCATATTTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTTGTTGTGATCTTAATGTGCCTCCCTTTTTCAACCCATATTTAT  544

seq1  ATGTGATCAGAAAAATCATGGACATTTTCAACTGGGAAAGGTTGAGATGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATCAGAAAAATCATGGACATTTTCAACTGGGAAAGGTTGAGATGA  594

seq1  GATACTTAACTTATATGCCAATGAGGAGACTTAAGTTAGTAATTAGCAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTAACTTATATGCCAATGAGGAGACTTAAGTTAGTAATTAGCAGT  644

seq1  AATAATCAAGGAAGATTAATGACTGTCTCAGAAAGTCCATTGCTGTGGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAAGGAAGATTAATGACTGTCTCAGAAAGTCCATTGCTGTGGGC  694

seq1  CATTAACCCTAGCATAGCAATTAATTCCCAAGGAAATGCTCAATACTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACCCTAGCATAGCAATTAATTCCCAAGGAAATGCTCAATACTTCA  744

seq1  AAGGTCATTCCCATGGCTAGAAATTATAACAAAGTAAAACCGTACCAGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATTCCCATGGCTAGAAATTATAACAAAGTAAAACCGTACCAGAA  794

seq1  TGTTCACTGTCAGAATGAAAACACTAATTATCACTCACTGGCATTTATTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTGTCAGAATGAAAACACTAATTATCACTCACTGGCATTTATTG  844

seq1  GGATCAATTTGACTGTTATGACTGAGAAGGTATTTGGATAAACATTATCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAATTTGACTGTTATGACTGAGAAGGTATTTGGATAAACATTATCC  894

seq1  CAAGGGTGCCTATGGGGTATTATTAGGTGGACTAATTTTTAGAACTAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTGCCTATGGGGTATTATTAGGTGGACTAATTTTTAGAACTAGTA  944

seq1  GAGGAGACTTCCTTTCCAGTGTGGTGGTACCTGGCTAGTGAGTTCATGGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGACTTCCTTTCCAGTGTGGTGGTACCTGGCTAGTGAGTTCATGGT  994

seq1  CAGAGCAGGACAGAATACTGATTCTCATCTGAGTAAGGAGATATTCCTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGGACAGAATACTGATTCTCATCTGAGTAAGGAGATATTCCTCT  1044

seq1  GAATGCCAGTAAATATTTGAAATGTTAGTCAATGTATTTCCAGGTTTAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCAGTAAATATTTGAAATGTTAGTCAATGTATTTCCAGGTTTAAG  1094

seq1  ATAAAACAGAAACATTGCCTCACCTTTGTGTTTGAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAGAAACATTGCCTCACCTTTGTGTTTGAGAATTC  1135