BAC Information

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BAC

Clone NameB6Ng01-137M06
Chromosome11 (Build37)
Map Location 14,405,914 - 14,571,255
singlet/doubletdoublet
Overlap gene1700046C09Rik, 1700054H16Rik
Upstream geneLOC432535
Downstream geneLOC100042542, LOC100041673, LOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M06.bB6Ng01-137M06.g
ACCDH937195DH937196
length1,1621,127
definitionDH937195|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M06, 5' end.DH937196|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,405,914 - 14,407,099)(14,570,129 - 14,571,255)
sequence
gaattccatacatgacatttctgtttctgtcttctaattctaagtccact
gcaaaatttcagttgctttgcttgctattgaagtattttctctgttaggg
atgcaccatatgtttaaacaataaaacttgtatcacagatgttctacttg
ttttaaaggtggcagctaattcattttcatataaagatttctaaaaaata
gatcttgctaaattcagaccttcctacatttaaaaatggctgtaaatcat
agcaggtaaatggatgaaggtaatctatttggattacatctctgccaatt
ctattaagcagggacttgggttgaacactttccaatgtcgatctgtaatt
ttctacatgtaaaagagaaaactgtactaatgcccatagtactttctacc
ataatgtaggaaatttaattcttctctacttctggaaaattgaacaaaat
ttaataaatgtttatatgtatatgaagaaggaagcatttgaatggatatg
tagacagaggaccatgagagaagaacaagatatgactgacgtggagcaag
aatcacacatatgatatagaacagaaaaggaacttctttgcttgaaaaat
ttcacaaggaaagcaaattccttttaagctagttaaaaacagaaagaaaa
tttagcccaattactgaaacataatagaatgagacaaataaaatcagacc
aaaaactggaaagtgacaggagaactgggaaactaccttgatccatgagt
agtgtgctttatattaaccacatagttggacaaagtgtctgtctcaacag
atacattcagcattctacttgactaccatggaatacagctggatatcaat
tacaggaacaacctgaacaattcaccagtgaatgaaaaaaatgggactag
acagaaattaagaatgaaattaaaactttctagaattgaataaaaaaatg
aatacacaaaactagaattccttggacatagtgtaagtagcaagttcata
gcactaagtgcctacacaacattggaagatctcatactagtacttatcag
catacctacagctttaaacaaagaggaatcatagccaaaagcctagatga
cagaaactcaattcaggactgagtcataagaacaaatttacacagtagga
tggttactgggg
gaattcagtggaaagtttctaaaatatatgaaggcaatcccaataagtct
ccaactagtgaatgagagtgagaaccaactgttcatcacttgtcaccata
tgaagatttcagtaccaggagtgagttacatcaagttgagtttttgccaa
agggaattccatggaaaccccccccccccaaaaaaaaaaaaaagaaggct
attgccaggaaaatagattggtctcccaaaacagacattaagctgccaat
gctgaataaaacatgaacacaactcattgatcatagagaagttatgttgg
taactccagcggccttcagatttaaccttgcccttgaagtaattttctga
tcctgttaaacctatagcccacaaaaagtatagcatgttgcaaagagaac
tctctattataactcattaccaccaacacagggaatcttagaaggaaatt
ttcacctctggacattagtgtgaatctgatctcatttaaaaaaatcactt
tcgtttgtaaatcaagatgcactaaagccattgtgtcacatttattttaa
gggagaggctttctcatttattcagaaataaagctatttcattaacatta
aaaaatgaaataaacatactaatattttctctctctactgaattcagatg
tgtgtaattaattcttattccactgggccttgagttaataaggcattagg
gaaaaaatgctggaaattgtgattccgtactttgttaccacgtgtgggta
agtattgggaaactgccagacttggcctatatagctcatagttctgaagc
atccttgctaatatacttttgtctaccaagttagcaacaatgggccatca
cttcaaaacacatattttatctatatctcttacttagcagcatatactag
aatatatcaatatcttattagaagtaaaatataaatctttgtgcccatgc
aaggacattttgggaaatttcagcaaaattcatatcaaaaatctatgact
ggtgtggaccagcagcataacctcactgtccctaaatgatttggatagga
gtcagcaaggatcagaggggtgtgggcatcctggatgacgggttgaatca
attggacaatgaattttttaaaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14405914_14407099
seq2: B6Ng01-137M06.b_44_1205

seq1  GAATTCCATACATGACATTTCTGTTTCTGTCTTCTAATTCTAAGTCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACATGACATTTCTGTTTCTGTCTTCTAATTCTAAGTCCACT  50

seq1  GCAAAATTTCAGTTGCTTTGCTTGCTATTGAAGTATTTTCTCTGTTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATTTCAGTTGCTTTGCTTGCTATTGAAGTATTTTCTCTGTTAGGG  100

seq1  ATGCACCATATGTTTAAACAATAAAACTTGTATCACAGATGTTCTACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCATATGTTTAAACAATAAAACTTGTATCACAGATGTTCTACTTG  150

seq1  TTTTAAAGGTGGCAGCTAATTCATTTTCATATAAAGATTTCTAAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGGTGGCAGCTAATTCATTTTCATATAAAGATTTCTAAAAAATA  200

seq1  GATCTTGCTAAATTCAGACCTTCCTACATTTAAAAATGGCTGTAAATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGCTAAATTCAGACCTTCCTACATTTAAAAATGGCTGTAAATCAT  250

seq1  AGCAGGTAAATGGATGAAGGTAATCTATTTGGATTACATCTCTGCCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAAATGGATGAAGGTAATCTATTTGGATTACATCTCTGCCAATT  300

seq1  CTATTAAGCAGGGACTTGGGTTGAACACTTTCCAATGTCGATCTGTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAGCAGGGACTTGGGTTGAACACTTTCCAATGTCGATCTGTAATT  350

seq1  TTCTACATGTAAAAGAGAAAACTGTACTAATGCCCATAGTACTTTCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATGTAAAAGAGAAAACTGTACTAATGCCCATAGTACTTTCTACC  400

seq1  ATAATGTAGGAAATTTAATTCTTCTCTACTTCTGGAAAATTGAACAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTAGGAAATTTAATTCTTCTCTACTTCTGGAAAATTGAACAAAAT  450

seq1  TTAATAAATGTTTATATGTATATGAAGAAGGAAGCATTTGAATGGATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATGTTTATATGTATATGAAGAAGGAAGCATTTGAATGGATATG  500

seq1  TAGACAGAGGACCATGAGAGAAGAACAAGATATGACTGACGTGGAGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAGGACCATGAGAGAAGAACAAGATATGACTGACGTGGAGCAAG  550

seq1  AATCACACATATGATATAGAACAGAAAAGGAACTTCTTTGCTTGAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACACATATGATATAGAACAGAAAAGGAACTTCTTTGCTTGAAAAAT  600

seq1  TTCACAAGGAAAGCAAATTCCTTTTAAGCTAGTTAAAAACAGAAAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGGAAAGCAAATTCCTTTTAAGCTAGTTAAAAACAGAAAGAAAA  650

seq1  TTTAGCCCAATTACTGAAACATAATAGAATGAGACAAATAAAATCAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCCAATTACTGAAACATAATAGAATGAGACAAATAAAATCAGACC  700

seq1  AAAAACTGGAAAGTGACAGGAGAACTGGGAAACTACCTTGATCCATGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGGAAAGTGACAGGAGAACTGGGAAACTACCTTGATCCATGAGT  750

seq1  AGTGTGCTTTATATTAACCACATAGTTGGACAAAGTGTCTGTCTCAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTTTATATTAACCACATAGTTGGACAAAGTGTCTGTCTCAACAG  800

seq1  ATACATTCAGCATTCTACTTGACTACCATGGAATACAGCTGGATATCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCAGCATTCTACTTGACTACCATGGAATACAGCTGGATATCAAT  850

seq1  TACAGGAACAACCTGAACAATTCACCAGTGAATGAAAAAAAATGGGACTA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACAGGAACAACCTGAACAATTCACCAGTGAATG-AAAAAAATGGGACTA  899

seq1  GACAGAAATTAAGAATGAAATTAAAACTTTCTAGAATTGAATAAAAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAATTAAGAATGAAATTAAAACTTTCTAGAATTGAATAAAAAAAT  949

seq1  GAATACACAAAAACTAGAATTCCTTGGACATAGTGTAAGTAGGCAAGTTC  1000
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  GAATACAC-AAAACTAGAATTCCTTGGACATAGTGTAAGTA-GCAAGTTC  997

seq1  ATAGCACTAAGTGCCTACACAACATTGGACAGATCTCATACTAGTAACTT  1050
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  ATAGCACTAAGTGCCTACACAACATTGGA-AGATCTCATACTAGT-ACTT  1045

seq1  ATCAGCATACCTACAAGCTTTAAAACAAAAGGAAGAAATCATAGCCAAAA  1100
      |||||||||||||| |||||||||  || |||    ||||||||||||||
seq2  ATCAGCATACCTAC-AGCTTTAAACAAAGAGG----AATCATAGCCAAAA  1090

seq1  GGCCTAGATGACAAGAATACTCAAATTCAGGACTGAAGTCAATAAAAGAA  1150
       ||||||||||| |||| |||| |||||||||||| |||| ||||    |
seq2  -GCCTAGATGAC-AGAA-ACTC-AATTCAGGACTG-AGTC-ATAA---GA  1131

seq1  ACAAAATAACAAACAAGTAAGGAGTGGTTACTGGGG  1186
      ||||| | |||    ||| |||| ||||||||||||
seq2  ACAAATTTACA---CAGT-AGGA-TGGTTACTGGGG  1162

seq1: chr11_14570129_14571255
seq2: B6Ng01-137M06.g_67_1193 (reverse)

seq1  AATATTTTAAAATATTCATTGTCACACTGATTCAAACCTGTCAT-CAGGA  49
      |||||||||||| ||||||||||  | |||||| |||| ||||| |||||
seq2  AATATTTTAAAAAATTCATTGTCCAATTGATTC-AACCCGTCATCCAGGA  49

seq1  TG--CACACACCTCTGATTCCTTGCTGACTCCTATCCAAAATCATGTAGT  97
      ||  ||||| ||||||| ||||||||||||||||||| ||||||| ||| 
seq2  TGCCCACACCCCTCTGA-TCCTTGCTGACTCCTATCC-AAATCATTTAGG  97

seq1  GACAGTGAGGTATGGCTGCTGGT-CACAACAGTCATAGAATTTTTGATAT  146
      |||||||||||   ||||||||| |||| ||||||||| |||||||||||
seq2  GACAGTGAGGTTATGCTGCTGGTCCACACCAGTCATAG-ATTTTTGATAT  146

seq1  GAATTTTGCTGAAATTTCCCAAAATGTCCTTGCATGGGCACAAAGATTTT  196
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAATTTTGCTGAAATTTCCCAAAATGTCCTTGCATGGGCACAAAGA-TTT  195

seq1  ATATTTTACTTCTAATAAGATATTGATATATTCTAGTATATGCTGCTAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTACTTCTAATAAGATATTGATATATTCTAGTATATGCTGCTAAG  245

seq1  TAAGAGATATAGATAAAATATGTGTTTTGAAGTGATGGCCCATTGTTGCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATATAGATAAAATATGTGTTTTGAAGTGATGGCCCATTGTTGCT  295

seq1  AACTTGGTAGACAAAAGTATATTAGCAAGGATGCTTCAGAACTATGAGCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGTAGACAAAAGTATATTAGCAAGGATGCTTCAGAACTATGAGCT  345

seq1  ATATAGGCCAAGTCTGGCAGTTTCCCAATACTTACCCACACGTGGTAACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGCCAAGTCTGGCAGTTTCCCAATACTTACCCACACGTGGTAACA  395

seq1  AAGTACGGAATCACAATTTCCAGCATTTTTTCCCTAATGCCTTATTAACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACGGAATCACAATTTCCAGCATTTTTTCCCTAATGCCTTATTAACT  445

seq1  CAAGGCCCAGTGGAATAAGAATTAATTACACACATCTGAATTCAGTAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCCAGTGGAATAAGAATTAATTACACACATCTGAATTCAGTAGAG  495

seq1  AGAGAAAATATTAGTATGTTTATTTCATTTTTTAATGTTAATGAAATAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATATTAGTATGTTTATTTCATTTTTTAATGTTAATGAAATAGC  545

seq1  TTTATTTCTGAATAAATGAGAAAGCCTCTCCCTTAAAATAAATGTGACAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTGAATAAATGAGAAAGCCTCTCCCTTAAAATAAATGTGACAC  595

seq1  AATGGCTTTAGTGCATCTTGATTTACAAACGAAAGTGATTTTTTTAAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTTAGTGCATCTTGATTTACAAACGAAAGTGATTTTTTTAAATG  645

seq1  AGATCAGATTCACACTAATGTCCAGAGGTGAAAATTTCCTTCTAAGATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGATTCACACTAATGTCCAGAGGTGAAAATTTCCTTCTAAGATTC  695

seq1  CCTGTGTTGGTGGTAATGAGTTATAATAGAGAGTTCTCTTTGCAACATGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTGGTGGTAATGAGTTATAATAGAGAGTTCTCTTTGCAACATGC  745

seq1  TATACTTTTTGTGGGCTATAGGTTTAACAGGATCAGAAAATTACTTCAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTTGTGGGCTATAGGTTTAACAGGATCAGAAAATTACTTCAAG  795

seq1  GGCAAGGTTAAATCTGAAGGCCGCTGGAGTTACCAACATAACTTCTCTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGTTAAATCTGAAGGCCGCTGGAGTTACCAACATAACTTCTCTAT  845

seq1  GATCAATGAGTTGTGTTCATGTTTTATTCAGCATTGGCAGCTTAATGTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATGAGTTGTGTTCATGTTTTATTCAGCATTGGCAGCTTAATGTCT  895

seq1  GTTTTGGGAGACCAATCTATTTTCCTGGCAATAGCCTTCTTTTTTTTTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGGAGACCAATCTATTTTCCTGGCAATAGCCTTCTTTTTTTTTTT  945

seq1  TTT-GGGGGGGGGGGTTTCCATGGAATTCCCTTTGGCAAAAACTCAACTT  995
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGGGGGGGGTTTCCATGGAATTCCCTTTGGCAAAAACTCAACTT  995

seq1  GATGTAACTCACTCCTGGTACTGAAATCTTCATATGGTGACAAGTGATGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAACTCACTCCTGGTACTGAAATCTTCATATGGTGACAAGTGATGA  1045

seq1  ACAGTTGGTTCTCACTCTCATTCACTAGTTGGAGACTTATTGGGATTGCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGGTTCTCACTCTCATTCACTAGTTGGAGACTTATTGGGATTGCC  1095

seq1  TTCATATATTTTAGAAACTTTCCACTGAATTC  1127
      ||||||||||||||||||||||||||||||||
seq2  TTCATATATTTTAGAAACTTTCCACTGAATTC  1127