BAC Information

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BAC

Clone NameB6Ng01-138J01
Chromosome11 (Build37)
Map Location 110,840,762 - 110,841,051
singlet/doubletsinglet
Overlap geneKcnj16
Upstream geneAbca8b, Abca8a, Abca9, Abca6, Abca5, Map2k6, LOC100041523
Downstream geneKcnj2, LOC667003, LOC100041539, LOC100041559, EG629966, LOC629967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138J01.bB6Ng01-138J01.g
ACCDH937791DH937792
length1,126407
definitionDH937791|Mus musculus domesticus DNA, BAC clone: B6Ng01-138J01, 5' end.DH937792|Mus musculus domesticus DNA, BAC clone: B6Ng01-138J01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaaacaactgaaaaaatg
tccacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ctacttcactccagtcagaatggctaagatcaaaaactcaggtgacagca
gatgctggcgaggatgtggagaaaggggaacactcctccactgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtgctataggaggatcccgcaatacctctcctgggca
tatatccagaagatgtcccaaccagtaagaagaacacatgctccactatg
ttcatagcagccttgtttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaagg
aactcgtacaatatgtactcactgataagtggatattagcccagaagctt
aggataaccaagatataagatacaacttgccaaactcatgaaattcaaga
ataacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggagctgtgatgaa
aggatgtcccatctagtgattgccatatccagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttgctgaaag
gatccagatatagctctctcttgtgagactatgcccgggccctagcaaac
acagaagtggatgatcacagtcagctattgatgggtcacactgccccaat
ggagagctagagaataccaaggagctaaagggactgcaaccctataggtg
acacatatgactacagtacccgagctcttgtctactgcatatgtatcaag
atgctagtcggcatcactgcagagaggccatgactgcactttaatgccag
tacaggtagccagggccaaaaagggg
aaatatataagcatatacagctatatttttattcaaatcatgacattcta
ctccttggaccccataggctattagacgtgtaatacaaaaaaaatgcatt
tagtccaacttcaaaagtctccatagactatataaccccagcaagcaata
gaactttgcagcttcagctacatggttctggctttagagtcaaagataca
aaaaaaggggctatagaatttcgctttgcactttaaaaaaaaatagctgc
tgagacctggcatctgtcagagatatctctctatggaggcccagaagaca
ttacatgaagctttgagggtgaaatctgggttgccttggagatcccaagt
cataggataatacatgccacagaaagctacaaagcaggtgtggaatcagc
ccgacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_110840762_110841051
seq2: B6Ng01-138J01.b_914_1169 (reverse)

seq1  CCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCC  50
      ||||||||||||||||||     ||||||||  ||||| ||||||    |
seq2  CCCCTTTTTGGCCCTGGC---TACCTGTACT--GGCAT-TAAAGT---GC  41

seq1  TGTCCAATGGGCATCTCTTTCCAGTGATGGCCAGCTAGGCCATCTTTTGA  100
       |||  ||||    |||| | ||||||| |||  ||||  ||||  ||||
seq2  AGTC--ATGG---CCTCTCTGCAGTGAT-GCCGACTAG--CATC--TTGA  81

seq1  TACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATATT  150
      ||||||||||| ||||  |||||||||  ||||||||  ||| ||||| |
seq2  TACATATGCAG-TAGA--CAAGAGCTC--GGGTACTG--TAG-TCATA-T  122

seq1  GTCCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCT  200
      ||  ||||||||||||||||| ||||||||||||||| ||||  ||||||
seq2  GTGTCACCTATAGGGTTGCAG-TCCCTTTAGCTCCTT-GGTA--TTCTCT  168

seq1  AGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCA  250
      |||| ||||||| |||||  ||||| |||| |||||||||||||||| ||
seq2  AGCT-CTCCATT-GGGGCAGTGTGACCCAT-CAATAGCTGACTGTGATCA  215

seq1  TCCACTTCTGTGTTTGCTA-GGCCCCGGCCTAGTCTCACAA  290
      ||||||||||||||||||| ||||| ||| |||||||||||
seq2  TCCACTTCTGTGTTTGCTAGGGCCCGGGCATAGTCTCACAA  256