BAC Information

Click to search

BAC

Clone NameB6Ng01-144C16
Chromosome11 (Build37)
Map Location 113,940,183 - 113,940,351
singlet/doubletsinglet
Overlap geneLOC100041739
Upstream gene2610035D17Rik, Slc39a11, Sstr2, Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4, Sdk2
Downstream geneLOC634710, 4932435O22Rik, Rpl38, Ttyh2, Dnaic2, Kif19a, 1500005I02Rik, Gpr142, Gprc5c, Cd300a, Cd300lb, Cd300c, 4732429D16Rik, Cd300d, LOC629970, LOC100043123, LOC100043125, Clm3, Cd300e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144C16.bB6Ng01-144C16.g
ACCDH941914DH941915
length169423
definitionDH941914|Mus musculus domesticus DNA, BAC clone: B6Ng01-144C16, 5' end.DH941915|Mus musculus domesticus DNA, BAC clone: B6Ng01-144C16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcttttctttgtggaggatgaccatggcgagtggatgacctctctgtcca
tgtgtatgcagacttagtgggcttaaaaataaacataaataaataaataa
ttaagaaagacatgaagttgagggggcttagggcttcaggggaagattgg
atgtggtgagggtggggta
catatatgtgtacagtgtcttctgatcagatttaccccaaatccttaact
gctcccagatccatcccctcccatcttctctctctttgttctagtgttta
actaactgagctcaatttgcgctgcccatatatccacgggtgagggccta
gccactggagtatggttgatctactagggaccacatcctaaagaatattg
actttctctccctgagaagccattatctgtcaatagctcctcagctcagg
agccccatccctccaccccttccctgctggagcgtccactggcttgagcc
tgtacactgtttcatgttggtcctcccagcctctggttctttccgtcttt
ctgcttcctcttccttgatggtttctgtgctgtgctctgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_113940183_113940351
seq2: B6Ng01-144C16.b_52_220

seq1  TCTTTTCTTTGTGGAGGATGACCATGGCGAGTGGATGACCTCTCTGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTGTGGAGGATGACCATGGCGAGTGGATGACCTCTCTGTCCA  50

seq1  TGTGTATGCAGACTTAGTGGGCTTAAAAATAAACATAAATAAATAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCAGACTTAGTGGGCTTAAAAATAAACATAAATAAATAAATAA  100

seq1  TTAAGAAAGACATGAAGTTGAGGGGGCTTAGGGCTTCAGGGGAAGATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAGACATGAAGTTGAGGGGGCTTAGGGCTTCAGGGGAAGATTGG  150

seq1  ATGTGGTGAGGGTGGGGTA  169
      |||||||||||||||||||
seq2  ATGTGGTGAGGGTGGGGTA  169