BAC Information

Click to search

BAC

Clone NameB6Ng01-146C22
Chromosome11 (Build37)
Map Location 71,459,031 - 71,459,779
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a11, Rnf167, Pfn1, Eno3, Spag7, Camta2, AI842396, Kif1c, LOC668488, Zfp3, A430084P05Rik, Rabep1, LOC668461, Nup88, Rpain, C1qbp, Dhx33, Derl2, Mis12, 6330403K07Rik, LOC382536, Nlrp1a, Nlrp1b, Nlrp1c, LOC100043249, 9230020A06Rik
Downstream geneWscd1, Aipl1, 6720460F02Rik, Pitpnm3, 4933427D14Rik, Txnl5, Med31, 4930563E22Rik, Slc13a5, Fbxo39, LOC628100, Tekt1, D130058I21Rik, Ggt6, Mybbp1a, 9830002I17Rik, LOC432577, Ube2g1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146C22.bB6Ng01-146C22.g
ACCDH943394DH943395
length750965
definitionDH943394|Mus musculus domesticus DNA, BAC clone: B6Ng01-146C22, 5' end.DH943395|Mus musculus domesticus DNA, BAC clone: B6Ng01-146C22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgcaagagtggggtggagtgacttacttccatgtggtcata
attacagtttctactgcaatctccatctctgcctcatccctcactcttac
tcatctcctattctgtctgctccacactgatttaaagactaaattcaggg
ccttcccaagaatttctccattcctctactagcacccagttcacacaaag
gcatgagagattatagcatatgttcctggggggaagagggaggtggcaga
ggaagtctacaacacacatcctttggctccatgcatatgccaatgccttc
atatctcaactccccctgcccagagatgtctccatatcacaaaccagctc
atccactgtctcatgcacagaacctaactctgttcactcctcaactctcc
tcaattatttaaggctcaatagtgcctctaacctgctaggattctagtat
agggaaccacatgaaactctactctgctgccatgtttcagaagacaaatg
tggatgagttcccaggttatgtctgccacactcaccatcataaactcctc
tcctatttctctctctctctctctctctctctctctctctcttctcttct
cttctcttctcttctctctttgtgtgtgtgtgtttttttttgagacaggg
tttctttgtgtatcccaggctggccttgaactcagaaattctcctgcctc
tgcctcccaagtgctgggattaaaggtgtgtgccaccactcccggcccat

gaattccctgccccaaatgaccttgctgaacacaacctagcaccttcaag
ctcaagtctaaatttaggccaggtctcaacacattccttctatggtatat
ccaggcattagcccagcccatccggactaagaggttcatgccctggaaaa
ggtggatactctgttactatggatttgatgctatttgcttactaccttgg
gtcgctcatgcaggtggtcctcctgcctgttgtaatttgaatgttgcagt
gtagcaatttcttctgaaattaagggttggactattccatactggaggga
actctttaagtttcaggaagtaaacaactcacatgtttcaaagagttcct
gaaacttattagactcacaagttcacccctcccccccaggttaaatagca
gtgaggcccgcttcagagagagggttgtaccctgtccagtttacagagct
ctagtgtttgagctttggtgagttgttagcatttaggtaatgtagctgcc
tttgaacagctgcttctgtaattaacctctcatacacactgctgtatgtg
accgcagtatacacattggtttatcaagtcatatttggtggtatcattac
tctggtctgtcttttggtcccctttctgaggtgagtggatgcttgataat
gtctccctaggaatagtgttcctcaaccagtgtgaaatggctttcataga
cttaggtgtttgaatacttagtatgcagctcatggagctgttgtgaacgg
ttgtagaaactttaggaggtggaaccttgctagaaaatgtgagtcgctgg
ggataggccttgagatttgatagcctagtcctacttcctgctcatttgtc
tcttccctccctctgtccctcctcctctccctcttttcctcattctttcc
tctcatactctcttcttcctgttcactccttcttgtcctctttgttatct
atggggtcatctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_71459031_71459779
seq2: B6Ng01-146C22.b_44_793

seq1  GAATTCTTCTGCAAGAGTGGGGTGGAGTGACTTACTTCCATGTGGTCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCAAGAGTGGGGTGGAGTGACTTACTTCCATGTGGTCATA  50

seq1  ATTACAGTTTCTACTGCAATCTCCATCTCTGCCTCATCCCTCACTCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTTTCTACTGCAATCTCCATCTCTGCCTCATCCCTCACTCTTAC  100

seq1  TCATCTCCTATTCTGTCTGCTCCACACTGATTTAAAGACTAAATTCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCTATTCTGTCTGCTCCACACTGATTTAAAGACTAAATTCAGGG  150

seq1  CCTTCCCAAGAATTTCTCCATTCCTCTACTAGCACCCAGTTCACACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCAAGAATTTCTCCATTCCTCTACTAGCACCCAGTTCACACAAAG  200

seq1  GCATGAGAGATTATAGCATATGTTCCTGGGGGGAAGAGGGAGGTGGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGAGATTATAGCATATGTTCCTGGGGGGAAGAGGGAGGTGGCAGA  250

seq1  GGAAGTCTACAACACACATCCTTTGGCTCCATGCATATGCCAATGCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTACAACACACATCCTTTGGCTCCATGCATATGCCAATGCCTTC  300

seq1  ATATCTCAACTCCCCCTGCCCAGAGATGTCTCCATATCACAAACCAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCAACTCCCCCTGCCCAGAGATGTCTCCATATCACAAACCAGCTC  350

seq1  ATCCACTGTCTCATGCACAGAACCTAACTCTGTTCACTCCTCAACTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGTCTCATGCACAGAACCTAACTCTGTTCACTCCTCAACTCTCC  400

seq1  TCAATTATTTAAGGCTCAATAGTGCCTCTAACCTGCTAGGATTCTAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATTTAAGGCTCAATAGTGCCTCTAACCTGCTAGGATTCTAGTAT  450

seq1  AGGGAACCACATGAAACTCTACTCTGCTGCCATGTTTCAGAAGACAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACCACATGAAACTCTACTCTGCTGCCATGTTTCAGAAGACAAATG  500

seq1  TGGATGAGTTCCCAGGTTATGTCTGCCACACTCACCATCATAAACTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAGTTCCCAGGTTATGTCTGCCACACTCACCATCATAAACTCCTC  550

seq1  TCCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTTCT  600

seq1  CTTCTCTTCTCTTCTCTC-TTGTGTGTGTGTGTTTTTTTTTGAGACAGGG  649
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTCTCTTCTCTTCTCTCTTTGTGTGTGTGTGTTTTTTTTTGAGACAGGG  650

seq1  TTTCTTTGTGTATCCCAGGCTGGCCTTGAACTCAGAAATTCGCCTGCCTC  699
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTCTTTGTGTATCCCAGGCTGGCCTTGAACTCAGAAATTCTCCTGCCTC  700

seq1  TGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACGCCCGGCCCAT  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACTCCCGGCCCAT  750