BAC Information

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BAC

Clone NameB6Ng01-146L02
Chromosome11 (Build37)
Map Location 17,942,191 - 17,943,400
singlet/doubletsinglet
Overlap genenone
Upstream gene1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486, EG665748, Etaa1, LOC327871
Downstream geneLOC627696, LOC627716, LOC665796, Meis1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L02.bB6Ng01-146L02.g
ACCDH943765DH943766
length1,1811,159
definitionDH943765|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L02, 5' end.DH943766|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaagtgtatttacttttggcaaaagaatagtaaactaaatat
catccataaaatcaatagattaagtaggatcagacttttactgatatttg
aaagcaatttaattggtacacaaaatagttgaaccaagcactcaataggc
acatcaaacagaatagtgataatcataatatgtaaatttaaatttaaaat
gttgataattgagtttattgtagagaataatggcatatttctctaggagt
ataagaagctttcttaggagtgaatgcaaattctcaacatgggagcaggt
ccctccactcctgtctgtctcttatctggggagttatgtcaaacgtaggt
acttagtgcctgaggaacatcttgaaaacatgtaagaagccacaccaaga
acatggttgcattgctttattttccccatggacttaagattcttagtttt
attttagaaatggggactgtatctacatcattttaccctctctttcctcc
ctctaaatctttctcagatggatgatatcttttcattttgtctctctcca
tctctcccctctttccttccctccccccacccccacacagatacacacag
atattcataagtaccacccattgatttcatttactgttgctcatccactt
atgtgtttagagctggctgcttaggattggatcacctatcaagaggctct
tctctggagaagactaattctccttttgttgataattatttattgcatct
tcatggtatggaataaccctttggagtgttattgtctcaacaatcaaggg
ctgtaaaggaaagaaaattcagtagtgaggtgttaatgatcccacatttc
taggagtaaaatatagccactaaagcaaattgacacccagggctggagac
tactaagttttcatattaaattctaaacaaagatatactagtagtagtgg
cataaattgtataaaagtaacaaccacttttaattggatttaagcccact
tcagagatggaacccatatctgacactgataagtagcaaacttgaaacta
atagtcatagtcctcttaggggttaatcatgactgtattattgatgaact
agcatagtacttcggtcataattcctatctaagatcaatgacctcaccaa
tctgttcagaagctttatgtctaggtaccga
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcatattctttctcagcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttgtatactggattacattgatggatttccgtatattaaacc
acccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttggat
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
gttatagtaccttctgcttctattttgtggaatagcttgtgaagaactgg
aattaggtcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggcttttttttttttggctgggagactattaataactgcttcta
tttctttagggcatatgggactgtttagatggtcaacttgatcctgattc
aactttggtacctggtatctgtccagaaatttgtccatttcgtccaggtt
ttccagttttgttgagtatagccttttgtagaaggatctgatggtgtttt
ggatttcttcaggatctgttgttatgtctcccttttcatttctgattttg
ttaattaggattttgtccctgtgccctctagtgagtctagctaaggttta
tctatcttgttgattttctcaagaaccaactcctcgtttggttaattctt
tgaatagttcttcttgtttccacttggttgatttcacccctgagtttgat
tatttcctgccttctactcctcttgggtgaatttgcttccttttctctag
accttttacgtgtgttgtcaagctgctaatggtgtgctctctctagtttc
tttttggaggcacctcagagctatgagtttctctctagggatgctttcat
tgtgtcccataattgggtatgtgtgggtcttcattattataaactccaaa
aaagttcttaatgtctttcttttattccttccttgaccagtatctatggt
gagagagtggtgtcccatattccacgggattgtttgggctttcttattat
gtcgttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17942191_17943400
seq2: B6Ng01-146L02.b_45_1225

seq1  GAATTCTCAAAGTGTATTTACTTTTGGCAAAAGAATAGTAAACTAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAGTGTATTTACTTTTGGCAAAAGAATAGTAAACTAAATAT  50

seq1  CATCCATAAAATCAATAGATTAAGTAGGATCAGACTTTTACTGATATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATAAAATCAATAGATTAAGTAGGATCAGACTTTTACTGATATTTG  100

seq1  AAAGCAATTTAATTGGTACACAAAATAGTTGAACCAAGCACTCAATAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATTTAATTGGTACACAAAATAGTTGAACCAAGCACTCAATAGGC  150

seq1  ACATCAAACAGAATAGTGATAATCATAATATGTAAATTTAAATTTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAACAGAATAGTGATAATCATAATATGTAAATTTAAATTTAAAAT  200

seq1  GTTGATAATTGAGTTTATTGTAGAGAATAATGGCATATTTCTCTAGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAATTGAGTTTATTGTAGAGAATAATGGCATATTTCTCTAGGAGT  250

seq1  ATAAGAAGCTTTCTTAGGAGTGAATGCAAATTCTCAACATGGGAGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAGCTTTCTTAGGAGTGAATGCAAATTCTCAACATGGGAGCAGGT  300

seq1  CCCTCCACTCCTGTCTGTCTCTTATCTGGGGAGTTATGTCAAACGTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCACTCCTGTCTGTCTCTTATCTGGGGAGTTATGTCAAACGTAGGT  350

seq1  ACTTAGTGCCTGAGGAACATCTTGAAAACATGTAAGAAGCCACACCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTGCCTGAGGAACATCTTGAAAACATGTAAGAAGCCACACCAAGA  400

seq1  ACATGGTTGCATTGCTTTATTTTCCCCATGGACTTAAGATTCTTAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTTGCATTGCTTTATTTTCCCCATGGACTTAAGATTCTTAGTTTT  450

seq1  ATTTTAGAAATGGGGACTGTATCTACATCATTTTACCCTCTCTTTCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAAATGGGGACTGTATCTACATCATTTTACCCTCTCTTTCCTCC  500

seq1  CTCTAAATCTTTCTCAGATGGATGATATCTTTTCATTTTGTCTCTCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAATCTTTCTCAGATGGATGATATCTTTTCATTTTGTCTCTCTCCA  550

seq1  TCTCTCCCCTCTTTCCTTCCCTCCCCCCACCCCCACACAGATACACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCTCTTTCCTTCCCTCCCCCCACCCCCACACAGATACACACAG  600

seq1  ATATTCATAAGTACCACCCATTGATTTCATTTACTGTTGCTCATCCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATAAGTACCACCCATTGATTTCATTTACTGTTGCTCATCCACTT  650

seq1  ATGTGTTTAGAGCTGGCTGCTTAGGATTGGATCACCTATCAAGAGGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTAGAGCTGGCTGCTTAGGATTGGATCACCTATCAAGAGGCTCT  700

seq1  TCTCTGGAGAAGACTAATTCTCCTTTTGTTGATAATTATTTATTGCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAGAAGACTAATTCTCCTTTTGTTGATAATTATTTATTGCATCT  750

seq1  TCATGGTATGGAATAACCCTTTGGAGTGTTATTGTCTCAACAATCAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTATGGAATAACCCTTTGGAGTGTTATTGTCTCAACAATCAAGGG  800

seq1  CTGTAAAGGAAAGAAAATTCAGTAGTGAGGTGTTAATGATCCCACATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGGAAAGAAAATTCAGTAGTGAGGTGTTAATGATCCCACATTTC  850

seq1  TAGGAGTAAAATATAGCCACTAAAGCAAATTGACACCCAGGGCTGGAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTAAAATATAGCCACTAAAGCAAATTGACACCCAGGGCTGGAGAC  900

seq1  TACTAAGTTTTCATATTAAATTCTAAAACAAAGATATACTAGTAGTAGTG  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TACTAAGTTTTCATATTAAATTCT-AAACAAAGATATACTAGTAGTAGTG  949

seq1  GCATAAATGGTATAAAAGTAACCAACCACTTTTAATTGGATTTAAGGCCC  1000
      |||||||| |||||||||||| ||||||||||||||||||||||| ||||
seq2  GCATAAATTGTATAAAAGTAA-CAACCACTTTTAATTGGATTTAA-GCCC  997

seq1  ACTTCAGGAGATGGAACCCATATCTGACACTGATAAAGTAGCCAAAACCT  1050
      |||||| ||||||||||||||||||||||||||| |||||||   || ||
seq2  ACTTCA-GAGATGGAACCCATATCTGACACTGAT-AAGTAGC---AAACT  1042

seq1  TGAAACTAATTAGGTCATAGT-CTC-TAGGGGTAAATCTATGACTGTTAT  1098
      ||||||||||   |||||||| ||| ||||||| |||| ||||||| |||
seq2  TGAAACTAAT--AGTCATAGTCCTCTTAGGGGTTAATC-ATGACTG-TAT  1088

seq1  TCTATTGAATGAACATAGCAATAAAATTACTTCTGTCATAATCCTCTATT  1148
        ||||| |||||| ||||    | | |||||| |||||||| | ||| |
seq2  --TATTG-ATGAAC-TAGC----ATAGTACTTCGGTCATAATTC-CTA-T  1128

seq1  CATAGATCAATGACCTCACTCAATCTGCTCAGAGAAGCTTCTTTATGTCA  1198
      |  |||||||||||||||| ||||||| ||  |||||   ||||||||| 
seq2  CTAAGATCAATGACCTCAC-CAATCTGTTC--AGAAG---CTTTATGTC-  1171

seq1  TAGGTTAACCGA  1210
      |||||  |||||
seq2  TAGGT--ACCGA  1181