BAC Information

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BAC

Clone NameB6Ng01-147L17
Chromosome11 (Build37)
Map Location 120,352,620 - 120,434,939
singlet/doubletdoublet
Overlap geneSlc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb
Upstream geneA730011L01Rik, Nptx1, 4932417H02Rik, Chmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12
Downstream geneArhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Tbcd, Zfp750
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147L17.bB6Ng01-147L17.g
ACCDH944528DH944529
length8751,001
definitionDH944528|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L17, 5' end.DH944529|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,352,620 - 120,353,496)(120,433,940 - 120,434,939)
sequence
gaattcacagcccagaaccctctccatggtggctgcctagggctgtgtcc
acagcaaggcttgggctgagttgcacttggcagggactcgctgggtgtag
gcatgggggaggagcactgctaccctttactaagagccttttgtccctga
tttctatttaatttgcaagctggcctcaagacggtttccatcccccccta
catctgggcgggggctgggctctcgagggggataggggacagaggtccac
tgctgcaacacgtgtccttctcctgggtaacacacgaagttagcaccagg
gcataagttcagactagggctagagggtgctggtaggaaaccaacctcct
gatgagttgagaatggcagagcgccttcggaactgagaccaaagccatga
tctggagagtgggggtggtcatgggttagctcagtttcacagttggctcc
agtggatcgcctctcattgctcctcgttgcggcctctttaagaccagagg
cggagtctcccaaggctggagtccggtggcgggcggagtccataggcccc
gcccccggggctgcgcgggcgcattggctgtaccgggcgcgggcgctcgg
tagcactttgaaccgggcgttgagcagctgggaccggagttgtgctcacc
ggggtcgggccaggtcgctgctgctctggccatggccgaggcacgcgcat
ctcgctggtactttgggggggctggcttcctgcggagccgcttgctgcac
gcacccgctggacctgctcaaggtgagtgagcctgagcttcaggccgagc
gggcgggtgagccctatgcgccggggaccatccgggcctggcgcctacaa
ggcgcctgctgcggccgccgttgac
gaattccgaatggtggacaggagcctcggacgaccacggggcgcccgaga
aacgtgcccgcggcgtggggacacgcctggcagctaccgcagccgagaaa
agcacagaacaccgaccccgaaactagggtccgtcacccaagacctgggc
agggaccgcacgagccgcacgcgcaccggaagtggcgtccctggcttcct
tgaggagacttgggggcggtgccagtacggaaacgcggtccagtcagaat
gcaacacgaggggcttcggaggcgcaagcgtagccccgcccaggggtccg
ggactccgcccactgccacgttcgacggagaatcgggctgggtacgcgca
tctctccaccaatcaggagccacgaggccgggcagcggaaagccgcagcc
attccagacgtgtggaaggcgtgggaaaagtcgccagtcagaagtccaga
aagagaaagttggctttcgccagcgaatcagacgctgggggacattgggt
ttgtgcgcgcgcgcgcgcgccgtggccaatcccaggcaagaaccgaaagg
cctccgggtctttgtcgacttggtggcccagccttgagtgggtgtccagt
ccccgcacggcgagggcgggtctctcagctccttggccaatcggagggcg
cggcggggcgcatgcgcacggcggctgacgcgcgcagcgagggggaggcg
tgggcgcgtccccggcccaggatttataaaggcgaggtctggaccgacgc
gcgctctcgtcgccttggctgtcccggcggcgccaacccaactgccccgc
ccgctgcagacgtccgacatgctgagccgtgcttttgctgtgcctagccc
tggccttggcggctagggtgggcgccgacgcccttggaggagaagacaac
gtccttggtgttgaagagagcaacttcgaggaggcgctggccgcgcacaa
gtacctgctggtggagttctgtgatgtcgccgtggccttgggtggggggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_120352620_120353496
seq2: B6Ng01-147L17.b_47_921

seq1  GAATTCACAGCCCAGAACCCTCTCCATGGTGGCTGCCTAGGGCTGTGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCCCAGAACCCTCTCCATGGTGGCTGCCTAGGGCTGTGTCC  50

seq1  ACAGCAAGGCTTGGGCTGAGTTGCACTTGGCAGGGACTCGCTGGGTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGGCTTGGGCTGAGTTGCACTTGGCAGGGACTCGCTGGGTGTAG  100

seq1  GCATGGGGGAGGAGCACTGCTACCCTTTACTAAGAGCCTTTTGTCCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGGGAGGAGCACTGCTACCCTTTACTAAGAGCCTTTTGTCCCTGA  150

seq1  TTTCTATTTAATTTGCAAGCTGGCCTCAAGACGGTTTCCATCCCCCCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTAATTTGCAAGCTGGCCTCAAGACGGTTTCCATCCCCCCCTA  200

seq1  CATCTGGGCGGGGGCTGGGCTCTCGAGGGGGATAGGGGACAGAGGTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGCGGGGGCTGGGCTCTCGAGGGGGATAGGGGACAGAGGTCCAC  250

seq1  TGCTGCAACACGTGTCCTTCTCCTGGGTAACACACGAAGTTAGCACCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAACACGTGTCCTTCTCCTGGGTAACACACGAAGTTAGCACCAGG  300

seq1  GCATAAGTTCAGACTAGGGCTAGAGGGTGCTGGTAGGAAACCAACCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGTTCAGACTAGGGCTAGAGGGTGCTGGTAGGAAACCAACCTCCT  350

seq1  GATGAGTTGAGAATGGCAGAGCGCCTTCGGAACTGAGACCAAAGCCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTGAGAATGGCAGAGCGCCTTCGGAACTGAGACCAAAGCCATGA  400

seq1  TCTGGAGAGTGGGGGTGGTCATGGGTTAGCTCAGTTTCACAGTTGGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGAGTGGGGGTGGTCATGGGTTAGCTCAGTTTCACAGTTGGCTCC  450

seq1  AGTGGATCGCCTCTCATTGCTCCTCGTTGCGGCCTCTTTAAGACCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCGCCTCTCATTGCTCCTCGTTGCGGCCTCTTTAAGACCAGAGG  500

seq1  CGGAGTCTCCCAAGGCTGGAGTCCGGTGGCGGGCGGAGTCCATAGGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGTCTCCCAAGGCTGGAGTCCGGTGGCGGGCGGAGTCCATAGGCCCC  550

seq1  GCCCCCGGGGCTGCGCGGGCGCATTGGCTGTACCGGGCGCGGGCGCTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCGGGGCTGCGCGGGCGCATTGGCTGTACCGGGCGCGGGCGCTCGG  600

seq1  TAGCACTTTGAACCGGGCGTTGAGCAGCTGGGACCGGAGTTGTGCTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTTTGAACCGGGCGTTGAGCAGCTGGGACCGGAGTTGTGCTCACC  650

seq1  GGGGTCGGGCCAGGTCGCTGCTGCTCTGGCCATGGCCGAGGCACGCGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCGGGCCAGGTCGCTGCTGCTCTGGCCATGGCCGAGGCACGCGCAT  700

seq1  CTCGCTGGTACTTT-GGGGGGCTGGCTTCCTGCGGAGCCGCTTGCTGCAC  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCGCTGGTACTTTGGGGGGGCTGGCTTCCTGCGGAGCCGCTTGCTGCAC  750

seq1  GCACCCGCTGGACCTGCTCAAGGTGAGTGAGCCTGAGCTTCAAGGCCGAG  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCACCCGCTGGACCTGCTCAAGGTGAGTGAGCCTGAGCTTC-AGGCCGAG  799

seq1  CGGGCGGGTGAGCCCTAGGCGCCGGGGACCATCCGGGGCCTGGCGCCTAC  849
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  CGGGCGGGTGAGCCCTATGCGCCGGGGACCATCC-GGGCCTGGCGCCTAC  848

seq1  AAGGCGCCTGCTGCGGCCGCCGCTTGAC  877
      |||||||||||||||||||||| |||||
seq2  AAGGCGCCTGCTGCGGCCGCCG-TTGAC  875

seq1: chr11_120433940_120434939
seq2: B6Ng01-147L17.g_71_1071 (reverse)

seq1  CCCCCCCCGCCCAGGCCCACGGCGCACTCACAGAACTCCACCAGCAGGTA  50
      |||||||| |||| | ||||||||   |||||||||||||||||||||||
seq2  CCCCCCCCACCCAAGGCCACGGCGACATCACAGAACTCCACCAGCAGGTA  50

seq1  CTTGTGCGCCGCCAGCGCCTCCTCGAAGTTGCTCTTCTTCAACACC-AGG  99
      ||||||||| |||||||||||||||||||||||| ||||||||||| |||
seq2  CTTGTGCGCGGCCAGCGCCTCCTCGAAGTTGCTC-TCTTCAACACCAAGG  99

seq1  ACGTTGTCCTCCTCCTCC-AGGGCGTCGGCGCCCACCCTAGCCGCCCAGG  148
      ||||||| || ||||||| ||||||||||||||||||||||||||| |||
seq2  ACGTTGT-CTTCTCCTCCAAGGGCGTCGGCGCCCACCCTAGCCGCCAAGG  148

seq1  CCAGGGCTAGGCACAGC-AAAGCACGGCTCAGCATGTCGGACGTCTGCAG  197
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAGGGCTAGGCACAGCAAAAGCACGGCTCAGCATGTCGGACGTCTGCAG  198

seq1  CGGGCGGGGCAGTTGGGTTGGCGCCGCCGGGACAGCCAAGGCGACGAGAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCGGGGCAGTTGGGTTGGCGCCGCCGGGACAGCCAAGGCGACGAGAG  248

seq1  CGCGCGTCGGTCCAGACCTCGCCTTTATAAATCCTGGGCCGGGGACGCGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGTCGGTCCAGACCTCGCCTTTATAAATCCTGGGCCGGGGACGCGC  298

seq1  CCACGCCTCCCCCTCGCTGCGCGCGTCAGCCGCCGTGCGCATGCGCCCCG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCCTCCCCCTCGCTGCGCGCGTCAGCCGCCGTGCGCATGCGCCCCG  348

seq1  CCGCGCCCTCCGATTGGCCAAGGAGCTGAGAGACCCGCCCTCGCCGTGCG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGCCCTCCGATTGGCCAAGGAGCTGAGAGACCCGCCCTCGCCGTGCG  398

seq1  GGGACTGGACACCCACTCAAGGCTGGGCCACCAAGTCGACAAAGACCCGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGACACCCACTCAAGGCTGGGCCACCAAGTCGACAAAGACCCGG  448

seq1  AGGCCTTTCGGTTCTTGCCTGGGATTGGCCACGGCGCGCGCGCGCGCGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTCGGTTCTTGCCTGGGATTGGCCACGGCGCGCGCGCGCGCGCA  498

seq1  CAAACCCAATGTCCCCCAGCGTCTGATTCGCTGGCGAAAGCCAACTTTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCAATGTCCCCCAGCGTCTGATTCGCTGGCGAAAGCCAACTTTCT  548

seq1  CTTTCTGGACTTCTGACTGGCGACTTTTCCCACGCCTTCCACACGTCTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGACTTCTGACTGGCGACTTTTCCCACGCCTTCCACACGTCTGG  598

seq1  AATGGCTGCGGCTTTCCGCTGCCCGGCCTCGTGGCTCCTGATTGGTGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTGCGGCTTTCCGCTGCCCGGCCTCGTGGCTCCTGATTGGTGGAG  648

seq1  AGATGCGCGTACCCAGCCCGATTCTCCGTCGAACGTGGCAGTGGGCGGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCGCGTACCCAGCCCGATTCTCCGTCGAACGTGGCAGTGGGCGGAG  698

seq1  TCCCGGACCCCTGGGCGGGGCTACGCTTGCGCCTCCGAAGCCCCTCGTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGACCCCTGGGCGGGGCTACGCTTGCGCCTCCGAAGCCCCTCGTGT  748

seq1  TGCATTCTGACTGGACCGCGTTTCCGTACTGGCACCGCCCCCAAGTCTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTGACTGGACCGCGTTTCCGTACTGGCACCGCCCCCAAGTCTCC  798

seq1  TCAAGGAAGCCAGGGACGCCACTTCCGGTGCGCGTGCGGCTCGTGCGGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAAGCCAGGGACGCCACTTCCGGTGCGCGTGCGGCTCGTGCGGTC  848

seq1  CCTGCCCAGGTCTTGGGTGACGGACCCTAGTTTCGGGGTCGGTGTTCTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAGGTCTTGGGTGACGGACCCTAGTTTCGGGGTCGGTGTTCTGT  898

seq1  GCTTTTCTCGGCTGCGGTAGCTGCCAGGCGTGTCCCCACGCCGCGGGCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTCGGCTGCGGTAGCTGCCAGGCGTGTCCCCACGCCGCGGGCAC  948

seq1  GTTTCTCGGGCGCCCCGTGGTCGTCCGAGGCTCCTGTCCACCATTCGGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCGGGCGCCCCGTGGTCGTCCGAGGCTCCTGTCCACCATTCGGAA  998

seq1  TTC  1000
      |||
seq2  TTC  1001