BAC Information

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BAC

Clone NameB6Ng01-149D24
Chromosome10 (Build37)11 (Build37)
Map Location 17,975,388 - 17,975,42773,071,606 - 73,072,578
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a
Downstream geneLOC627646, Nhsl1, Hebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149D24.bB6Ng01-149D24.g
ACCDH945641DH945642
length36967
definitionDH945641|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D24, 5' end.DH945642|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(17,975,388 - 17,975,427)(73,071,606 - 73,072,578)
sequence
agtctcactctttgttgttctcttacaagccacctc
gaattcaggggagaaaggccagggaaggaaggtgggaactggaaggacta
ggaagtgtgtgggagcttcagtgaatggcttctctactggtataacaagt
cgaactgagctgaacttatagttcgttgtgggtagctctcaggcaggttc
actgacctcacaggagggggtcagtggaatcacaaggctgggctgaggca
aggcttcctaaaggggtgtgggtagatcttcaatgtgatggtgggggtac
aaataaggttatattataaccttattttgtgattttagggccctgtaggt
gggacttagaaccagtggtcagttttgagaatcctgaactaggagctggc
tttgtccagcgttttgtgtgggcttttgaaagcgagggctcctgatcaga
agagaagggtggggatctcttggcccaggccatcttgcctttgttccaaa
ccctctggcctaacacttggtattagaatatgatggatggtgatgggaac
ctcagctacctctggagaccctggaactggctaggtcaacagttcccaaa
ctgggtgtctctacttcctagccaattagtccagatctcaacaggcagtg
gtaactgagtcttccttaagagctccctgggaactttaggtcatgccaaa
gttcttatttgaagcccagtgtcaccatgtctcccttgggcattttcttc
tatgccctggtggggccttgactctaagtcttgatgtttttggctgctgt
tcatcactttaggattgcccaatgtggagttgtgttgcagaaatctcttt
accctctcatttgggcagagaggcaataaagcttgaagcagtgtgagata
gactcatgaattatcagttttaccaggcctgggggagaaggagattaact
tgggtgaatgagctcaactgtctaagaagaggaattcctgggtctaaagc
ctggagatttattaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_17975388_17975427
seq2: B6Ng01-149D24.b_45_84

seq1  ATTCAGTCTCACTCTTTGTTGTTCTCTTACAAGCCACCTC  40
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTCTCACTCTTTGTTGTTCTCTTACAAGCCACCTC  40

seq1: chr11_73071606_73072578
seq2: B6Ng01-149D24.g_70_1036

seq1  GAATTCAGGGGAGAAAGGCCAGGGAAGGAAGGTGGGAACTGGAAGGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGAGAAAGGCCAGGGAAGGAAGGTGGGAACTGGAAGGACTA  50

seq1  GGAAGTGTGTGGGAGCTTCAGTGAATGGCTTCTCTACTGGTATAACAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGTGTGGGAGCTTCAGTGAATGGCTTCTCTACTGGTATAACAAGT  100

seq1  CGAACTGAGCTGAACTTATAGTTCGTTGTGGGTAGCTCTCAGGCAGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTGAGCTGAACTTATAGTTCGTTGTGGGTAGCTCTCAGGCAGGTTC  150

seq1  ACTGACCTCACAGGAGGGGGTCAGTGGAATCACAAGGCTGGGCTGAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCTCACAGGAGGGGGTCAGTGGAATCACAAGGCTGGGCTGAGGCA  200

seq1  AGGCTTCCTAAAGGGGTGTGGGTAGATCTTCAATGTGATGGTGGGGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCCTAAAGGGGTGTGGGTAGATCTTCAATGTGATGGTGGGGGTAC  250

seq1  AAATAAGGTTATATTATAACCTTATTTTGTGATTTTAGGGCCCTGTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGTTATATTATAACCTTATTTTGTGATTTTAGGGCCCTGTAGGT  300

seq1  GGGACTTAGAACCAGTGGTCAGTTTTGAGAATCCTGAACTAGGAGCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTAGAACCAGTGGTCAGTTTTGAGAATCCTGAACTAGGAGCTGGC  350

seq1  TTTGTCCAGCGTTTTGTGTGGGCTTTTGAAAGCGAGGGCTCCTGATCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCAGCGTTTTGTGTGGGCTTTTGAAAGCGAGGGCTCCTGATCAGA  400

seq1  AGAGAAGGGTGGGGATCTCTTGGCCCAGGCCATCTTGCCTTTGTTCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGGTGGGGATCTCTTGGCCCAGGCCATCTTGCCTTTGTTCCAAA  450

seq1  CCCTCTGGCCTAACACTTGGTATTAGAATATGATGGATGGTGATGGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGGCCTAACACTTGGTATTAGAATATGATGGATGGTGATGGGAAC  500

seq1  CTCAGCTACCTCTGGAGACCCTGGAACTGGCTAGGTCAACAGTTCCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTACCTCTGGAGACCCTGGAACTGGCTAGGTCAACAGTTCCCAAA  550

seq1  CTGGGTGTCTCTACTTCCTAGCCAATTAGTCCAGATCTCAACAGGCAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTCTCTACTTCCTAGCCAATTAGTCCAGATCTCAACAGGCAGTG  600

seq1  GTAACTGAGTCTTCCTTAAGAGCTCCCT-GGAACTTTAGGTCATGCCAAA  649
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTAACTGAGTCTTCCTTAAGAGCTCCCTGGGAACTTTAGGTCATGCCAAA  650

seq1  GTTCTTATTTGAAGCCCAGTGTCACCATGTCTCCCTT-GGCATTTTCTTC  698
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTCTTATTTGAAGCCCAGTGTCACCATGTCTCCCTTGGGCATTTTCTTC  700

seq1  TATGCCCTGGTGGGGCCTTGACTCTAAGTCTTGATGTTTTTTGGCTGCTG  748
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATGCCCTGGTGGGGCCTTGACTCTAAGTCTTGATG-TTTTTGGCTGCTG  749

seq1  TTCATCACTTTAGGATTGCCCAATGTGGAGTTGTGTTGCAGAAATCTCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCACTTTAGGATTGCCCAATGTGGAGTTGTGTTGCAGAAATCTCTT  799

seq1  TACCCTCTCATTTGGGCAGAGAGGCAATAAAGCCTGAAGCAGGTGTGAGA  848
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  TACCCTCTCATTTGGGCAGAGAGGCAATAAAGCTTGAAGCA-GTGTGAGA  848

seq1  TAGACTCATGAATTATCAGGTTTACCAGGGCCTGGGGGAGAAAGGAAGTA  898
      ||||||||||||||||||| ||||||| ||||||||||||||  | ||  
seq2  TAGACTCATGAATTATCAGTTTTACCA-GGCCTGGGGGAGAA--GGAGAT  895

seq1  TAAACTGGGTGAATGAGCTCAACTGTCAAAGAAGAGGAAATTTCATGGGT  948
      |||  |||||||||||||||||||||| |||||||||||  ||| |||||
seq2  TAACTTGGGTGAATGAGCTCAACTGTCTAAGAAGAGGAA--TTCCTGGGT  943

seq1  CTAAGAGCCTGGAGATTTATTTATT  973
      |||| |||||||||||||||| |||
seq2  CTAA-AGCCTGGAGATTTATTAATT  967