BAC Information

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BAC

Clone NameB6Ng01-152P18
Chromosome11 (Build37)
Map Location 114,035,624 - 114,183,551
singlet/doubletdoublet
Overlap genenone
Upstream gene2610035D17Rik, Slc39a11, Sstr2, Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4, Sdk2, LOC100041739
Downstream geneLOC634710, 4932435O22Rik, Rpl38, Ttyh2, Dnaic2, Kif19a, 1500005I02Rik, Gpr142, Gprc5c, Cd300a, Cd300lb, Cd300c, 4732429D16Rik, Cd300d, LOC629970, LOC100043123, LOC100043125, Clm3, Cd300e, Cd300lf, Rab37, Slc9a3r1, Nat9, Tmem104, Grin2c, Fdxr, Fads6, Otop2, Ush1g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152P18.bB6Ng01-152P18.g
ACCDH948423DH948424
length6741,108
definitionDH948423|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P18, 5' end.DH948424|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,035,624 - 114,036,297)(114,182,447 - 114,183,551)
sequence
gaattctgtctcctgggaccagcagccaggtctcaagaatgctcaggatc
tttgctgtttcacccctcttcccctgtgtatgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtacatgcacacataactctaccagatatgaca
tcaatgctcacacgtgtgagtacgtgtgtgatgtcaatagtttctctctg
tttctgtctctctctgtcttagattttgagatagggcctctcactaacct
ggatgcttgcccttccagataggctggctgcccaacagactcctgggatc
cacccgttccctcccacacccacaaatgccagggttgcctggcttccaca
tagggacccgggatttgaactcgggccctcttgatttcccaataagcaca
cttaccactgagccattttcccagccctaatggactcttgcattttccag
aaatcaactcatctaacatccctggaggccagaaacctttactgtgtgca
tcagcagcctccttccctctgggcatgcgcttggcagcatcacagtctga
gacaaccagggggtaacctgacagaggtagaagtgacatctgtccctggt
tgtcttcggctgaccaagagttaagaccgagggactgaagatgggacaat
gatctgctctatttatacttcacc
gaattcagcttcttgtgctgtgtagacccctcagggctgtgcacttgatc
tcctagatactctaggcttaagagagctctgtacctgcgctttgtcggcg
tgagacatccaggctcctgccaggtgcagcgcttccgctcttctccagga
ccagcggaagagggttaattgctaagtttgtaactcagatttctgtttag
ccttctattcattgttaaattgagagggaccagatgggatacaaaatgta
ttatttcccgagtttttgactttctggttaaaaaaaaaaaatcacttggc
ttgtgaaattcaaacacatttatgaaaaatagcagatgcctattacattg
gacaattagctttgggactcaaaagctaatcaaaagcatagctttgacag
caattatttgatcctgccttcccgaagatatctcggatgctcattagtca
gtacacgcacattctccagcacacacacgcttgcgcgcgcacacacacac
acacacacacacacacacacacacacacacagagtctacaggcaacagac
atttgtggctttgttcatttcctgcagtctctgtgccatcagctcaaggg
agtgagagaacaaagatgcagaggctcctggcccaggggaggcctgggaa
ggaacactggagagagcagttctcaaaggtgtctggttgcccgcaagcag
ttcttaaaaagaaaatgggggtcagattcaattgaggaagcctccgacag
actctctgtggcccagaacatacgtagaatgttcttttcccttctccctg
ggacgtgcagggcttccagatatggagtctgcacgccacctcactggttg
tatttcctctgtggttttcttgactctggactggaaatgatctttccatt
gcaaatgggaaaacccccaacataaaaagctgagacttagggagtgcagt
cctcagagcatcagagcttgttcatcacccacatcggatcatatgtgacg
acctgcaaacccctgcctccaccccaagatcaagcccaataggtgtcctt
catactaagaggaaatgggaaggttgggagccctccggtggagaattcaa
gccagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_114035624_114036297
seq2: B6Ng01-152P18.b_46_719

seq1  GAATTCTGTCTCCTGGGACCAGCAGCCAGGTCTCAAGAATGCTCAGGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTCCTGGGACCAGCAGCCAGGTCTCAAGAATGCTCAGGATC  50

seq1  TTTGCTGTTTCACCCCTCTTCCCCTGTGTATGTGTGTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTTTCACCCCTCTTCCCCTGTGTATGTGTGTGTGTGTGTGTGTG  100

seq1  TGTGTGTGTGTGTGTGTGTACATGCACACATAACTCTACCAGATATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTACATGCACACATAACTCTACCAGATATGACA  150

seq1  TCAATGCTCACACGTGTGAGTACGTGTGTGATGTCAATAGTTTCTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCTCACACGTGTGAGTACGTGTGTGATGTCAATAGTTTCTCTCTG  200

seq1  TTTCTGTCTCTCTCTGTCTTAGATTTTGAGATAGGGCCTCTCACTAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCTCTCTCTGTCTTAGATTTTGAGATAGGGCCTCTCACTAACCT  250

seq1  GGATGCTTGCCCTTCCAGATAGGCTGGCTGCCCAACAGACTCCTGGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTTGCCCTTCCAGATAGGCTGGCTGCCCAACAGACTCCTGGGATC  300

seq1  CACCCGTTCCCTCCCACACCCACAAATGCCAGGGTTGCCTGGCTTCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGTTCCCTCCCACACCCACAAATGCCAGGGTTGCCTGGCTTCCACA  350

seq1  TAGGGACCCGGGATTTGAACTCGGGCCCTCTTGATTTCCCAATAAGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACCCGGGATTTGAACTCGGGCCCTCTTGATTTCCCAATAAGCACA  400

seq1  CTTACCACTGAGCCATTTTCCCAGCCCTAATGGACTCTTGCATTTTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCACTGAGCCATTTTCCCAGCCCTAATGGACTCTTGCATTTTCCAG  450

seq1  AAATCAACTCATCTAACATCCCTGGAGGCCAGAAACCTTTACTGTGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACTCATCTAACATCCCTGGAGGCCAGAAACCTTTACTGTGTGCA  500

seq1  TCAGCAGCCTCCTTCCCTCTGGGCATGCGCTTGGCAGCATCACAGTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGCCTCCTTCCCTCTGGGCATGCGCTTGGCAGCATCACAGTCTGA  550

seq1  GACAACCAGGGGGTAACCTGACAGAGGTAGAAGTGACATCTGTCCCTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCAGGGGGTAACCTGACAGAGGTAGAAGTGACATCTGTCCCTGGT  600

seq1  TGTCTTCGGCTGACCAAGAGTTAAGACCGAGGGACTGAAGAGGGGACAAT  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTCTTCGGCTGACCAAGAGTTAAGACCGAGGGACTGAAGATGGGACAAT  650

seq1  GATCTGCTCTATTTATACTTCACC  674
      ||||||||||||||||||||||||
seq2  GATCTGCTCTATTTATACTTCACC  674

seq1: chr11_114182447_114183551
seq2: B6Ng01-152P18.g_69_1176 (reverse)

seq1  GGACTGGCTGGAA-TCT-CACAGGAGGGCTCCCAACCTTCCCATTCCCTC  48
      ||||||||| ||| ||| ||| ||||||||||||||||||||||| ||||
seq2  GGACTGGCTTGAATTCTCCACCGGAGGGCTCCCAACCTTCCCATTTCCTC  50

seq1  TTAGTATGAAGGAACACCTA-TGGGCTTGATCTTGGGGTGGGAGGCAGGG  97
      |||||||||||| ||||||| |||||||||||||||||| ||||||||||
seq2  TTAGTATGAAGG-ACACCTATTGGGCTTGATCTTGGGGT-GGAGGCAGGG  98

seq1  GTTTGCAGGTCGTCACATATGATCGGATGTGGGTGATGAAC-AGCTCTGA  146
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  GTTTGCAGGTCGTCACATATGATCCGATGTGGGTGATGAACAAGCTCTGA  148

seq1  TGCTCTGAGGACTGCACTCCCTAAGTCTCAGCTTTTTATGTTGGGGGTTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAGGACTGCACTCCCTAAGTCTCAGCTTTTTATGTTGGGGGTTT  198

seq1  TCCCATTTGCAATGGAAAGATCA-TTCCAGTCCAGAGTCAAGAAAAGCCA  245
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  TCCCATTTGCAATGGAAAGATCATTTCCAGTCCAGAGTCAAGAAAA-CCA  247

seq1  CAGAGGAAATACAACCAGTGAGGTGGCGTGCAGACTCCATATCTGGAAGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAATACAACCAGTGAGGTGGCGTGCAGACTCCATATCTGGAAGC  297

seq1  CCTGCACGT-CCAAGGAGAAGGGAAAAGAACATTCTACGTATGTTCTGGG  344
      ||||||||| ||| ||||||||||||||||||||||||||||||||||||
seq2  CCTGCACGTCCCAGGGAGAAGGGAAAAGAACATTCTACGTATGTTCTGGG  347

seq1  CCACAGAGAGTCTGTCGGAGGCTTCCTCAATTGAATCTGACCCCCATTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAGAGTCTGTCGGAGGCTTCCTCAATTGAATCTGACCCCCATTTT  397

seq1  CTTTTTAAGAACTGCTTGCGGGCAACCAGACACCTTTGAGAACTGCTCTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAGAACTGCTTGCGGGCAACCAGACACCTTTGAGAACTGCTCTC  447

seq1  TCCAGTGTTCCTTCCCAGGCCTCCCCTGGGCCAGGAGCCTCTGCATCTTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTTCCTTCCCAGGCCTCCCCTGGGCCAGGAGCCTCTGCATCTTT  497

seq1  GTTCTCTCACTCCCTTGAGCTGATGGCACAGAGACTGCAGGAAATGAACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCACTCCCTTGAGCTGATGGCACAGAGACTGCAGGAAATGAACA  547

seq1  AAGCCACAAATGTCTGTTGCCTGTAGACTCTGTGTGTGTGTGTGTGTGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAAATGTCTGTTGCCTGTAGACTCTGTGTGTGTGTGTGTGTGTG  597

seq1  TGTGTGTGTGTGTGTGTGTGTGCGCGCGCAAGCGTGTGTGTGCTGGAGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGCGCGCGCAAGCGTGTGTGTGCTGGAGAA  647

seq1  TGTGCGTGTACTGACTAATGAGCATCCGAGATATCTTCGGGAAGGCAGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGTGTACTGACTAATGAGCATCCGAGATATCTTCGGGAAGGCAGGA  697

seq1  TCAAATAATTGCTGTCAAAGCTATGCTTTTGATTAGCTTTTGAGTCCCAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATTGCTGTCAAAGCTATGCTTTTGATTAGCTTTTGAGTCCCAA  747

seq1  AGCTAATTGTCCAATGTAATAGGCATCTGCTATTTTTCATAAATGTGTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTGTCCAATGTAATAGGCATCTGCTATTTTTCATAAATGTGTTT  797

seq1  GAATTTCACAAGCCAAGTGATTTTTTTTTTTTAACCAGAAAGTCAAAAAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCACAAGCCAAGTGATTTTTTTTTTTTAACCAGAAAGTCAAAAAC  847

seq1  TCGGGAAATAATACATTTTGTATCCCATCTGGTCCCTCTCAATTTAACAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAAATAATACATTTTGTATCCCATCTGGTCCCTCTCAATTTAACAA  897

seq1  TGAATAGAAGGCTAAACAGAAATCTGAGTTACAAACTTAGCAATTAACCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGAAGGCTAAACAGAAATCTGAGTTACAAACTTAGCAATTAACCC  947

seq1  TCTTCCGCTGGTCCTGGAGAAGAGCGGAAGCGCTGCACCTGGCAGGAGCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCGCTGGTCCTGGAGAAGAGCGGAAGCGCTGCACCTGGCAGGAGCC  997

seq1  TGGATGTCTCACGCCGACAAAGCGCAGGTACAGAGCTCTCTTAAGCCTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTCTCACGCCGACAAAGCGCAGGTACAGAGCTCTCTTAAGCCTAG  1047

seq1  AGTATCTAGGAGATCAAGTGCACAGCCCTGAGGGGTCTACACAGCACAAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTAGGAGATCAAGTGCACAGCCCTGAGGGGTCTACACAGCACAAG  1097

seq1  AGGCTGAATTC  1105
      | |||||||||
seq2  AAGCTGAATTC  1108