BAC Information

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BAC

Clone NameB6Ng01-153N09
Chromosome11 (Build37)
Map Location 67,449,905 - 67,502,854
singlet/doubletdoublet
Overlap geneGas7, Rcvrn
Upstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
Downstream geneGlp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153N09.bB6Ng01-153N09.g
ACCDH949036DH949037
length5631,030
definitionDH949036|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N09, 5' end.DH949037|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,502,286 - 67,502,854)(67,449,905 - 67,450,935)
sequence
atcaacgggtgaaagaataaagagacaataacaggaaccctgaaggtaga
agagaagcaggaagtcaggggtggggtacacaaggctgggaccactagca
ctgtgtccatgtggacattcatgtcctggtgtcctttgtccttctgctgt
catcaggactgaacccatcactggtgtgtagagcccaggagggaggtaga
gacctctcgtaggaaggaaaagtgggtgcccttctaggaaagagggtccc
tatgggacccatcatctctggagagtttattttttgtgggatgaatataa
gcatctcaagtgtccacgtaactgagggaggaaaaaggaaggatggcact
gaaattcctgaaaacactttataacggtgtaggggcaattatacatagca
aacgccgtcaacatttaaactctaatttaaacatttaattcttcagaatt
aatacacacagatgctatcatggggtgggggaggcgtgcagcctccatcg
ggatctgagttttgacaactttactttcactttttttacatccatttttt
tttactgttccag
gaattccaagtggcagagaccgctggctttgttgcttagtctctccatgg
tttcctgttccctccctctctgctgtcacccccctcctcgaatcaacctc
cttctccattttatccaggtatctttcccctcttctcattgttcatctcc
caagcctggtctgactggccatgaggtgaaggtcactgtgtgggtgccca
tgtttacatttattttgaagttactacagttaccaagcggttggatcttt
tcattcccctttttaaatcgtagaaaaccctgagttggtagtttcatgca
ttttcttatgtccccatcctgccctgagcactgtagctgagtaatttttg
actgactttacttccccctcagaggctgggggcccaggaaatccccacgt
gggcttcatttgtcctatggtcagtggctggtgaattaggagcccagagg
atggggatgctcgtaggcaagggtcctggggtctcaagggctttaaatgg
ttctcacgtgcactggtaagctttctgaatgtgccagcctggagtagaga
accatataccaccacagggtcagaagggaatgctgtgtggggagaaatgg
ttgagtggaaaattagttttttcttcccagtaattgttttgacatgagca
gtaattagccaacagctgacaggctggaactgaagaaagaacaagaggat
ggattaaaggcaggatgcctgggcattagcgggcttcctggcatggcttg
agagtcagaagagccagggttaggtgacaggatgcagcttatagcatgtc
tagtggtttctgggaagagggaggtcagaagggcagcctctgccctcgaa
gagctggaaaacaaaggggtttctagggactccgtgacatcaaagaccat
ggtgtggctacttgtatctgagaagctgctttatttcatcaccagctgag
ctatgatttgtcctcgtggaagaagtagtcagagtatacctgctgagaga
aatgcacatgtttctaggctcctgaataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67502286_67502854
seq2: B6Ng01-153N09.b_49_617 (reverse)

seq1  CTGGACCAGT-AAATAAAATGGATGTAATATAAGTTGTAAGTAACGTTGT  49
      ||||| |||| ||| ||||||||||||| | ||| || |||||| |||||
seq2  CTGGAACAGTAAAAAAAAATGGATGTAAAAAAAG-TGAAAGTAAAGTTGT  49

seq1  CAAAACTCTGATCCCGATGGAGGCTGCACGCCTCCCCCACCCCATGATAG  99
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCAGATCCCGATGGAGGCTGCACGCCTCCCCCACCCCATGATAG  99

seq1  CATCTGTGTGTATTAATTCTGAAGAATTAAATGTTTAAATTAGAGTTTAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGTGTATTAATTCTGAAGAATTAAATGTTTAAATTAGAGTTTAA  149

seq1  ATGTTGACGGCGTTTGCTATGTATAATTGCCCCTACACCGTTATAAAGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGACGGCGTTTGCTATGTATAATTGCCCCTACACCGTTATAAAGTG  199

seq1  TTTTCAGGAATTTCAGTGCCATCCTTCCTTTTTCCTCCCTCAGTTACGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGAATTTCAGTGCCATCCTTCCTTTTTCCTCCCTCAGTTACGTG  249

seq1  GACACTTGAGATGCTTATATTCATCCCACAAAAAATAAACTCTCCAGAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTGAGATGCTTATATTCATCCCACAAAAAATAAACTCTCCAGAGA  299

seq1  TGATGGGTCCCATAGGGACCCTCTTTCCTAGAAGGGCACCCACTTTTCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGTCCCATAGGGACCCTCTTTCCTAGAAGGGCACCCACTTTTCCT  349

seq1  TCCTACGAGAGGTCTCTACCTCCCTCCTGGGCTCTACACACCAGTGATGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACGAGAGGTCTCTACCTCCCTCCTGGGCTCTACACACCAGTGATGG  399

seq1  GTTCAGTCCTGATGACAGCAGAAGGACAAAGGACACCAGGACATGAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTCCTGATGACAGCAGAAGGACAAAGGACACCAGGACATGAATGT  449

seq1  CCACATGGACACAGTGCTAGTGGTCCCAGCCTTGTGTACCCCACCCCTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGACACAGTGCTAGTGGTCCCAGCCTTGTGTACCCCACCCCTGA  499

seq1  CTTCCTGCTTCTCTTCTACCTTCAGGGTTCCTGTTATTGTCTCTTTATTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCTTCTCTTCTACCTTCAGGGTTCCTGTTATTGTCTCTTTATTC  549

seq1  TTTCACCCGTTGATGAATTC  569
      ||||||||||||||||||||
seq2  TTTCACCCGTTGATGAATTC  569

seq1: chr11_67449905_67450935
seq2: B6Ng01-153N09.g_70_1099

seq1  GAATTCCAAGTGGCAGAGACCGCTGGCTTTGTTGCTTAGTCTCTCCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTGGCAGAGACCGCTGGCTTTGTTGCTTAGTCTCTCCATGG  50

seq1  TTTCCTGTTCCCTCCCTCTCTGCTGTCACCCCCCTCCTCGAATCAACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTTCCCTCCCTCTCTGCTGTCACCCCCCTCCTCGAATCAACCTC  100

seq1  CTTCTCCATTTTATCCAGGTATCTTTCCCCTCTTCTCATTGTTCATCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCATTTTATCCAGGTATCTTTCCCCTCTTCTCATTGTTCATCTCC  150

seq1  CAAGCCTGGTCTGACTGGCCATGAGGTGAAGGTCACTGTGTGGGTGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTGGTCTGACTGGCCATGAGGTGAAGGTCACTGTGTGGGTGCCCA  200

seq1  TGTTTACATTTATTTTGAAGTTACTACAGTTACCAAGCGGTTGGATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATTTATTTTGAAGTTACTACAGTTACCAAGCGGTTGGATCTTT  250

seq1  TCATTCCCCTTTTTAAATCGTAGAAAACCCTGAGTTGGTAGTTTCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCCCTTTTTAAATCGTAGAAAACCCTGAGTTGGTAGTTTCATGCA  300

seq1  TTTTCTTATGTCCCCATCCTGCCCTGAGCACTGTAGCTGAGTAATTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTATGTCCCCATCCTGCCCTGAGCACTGTAGCTGAGTAATTTTTG  350

seq1  ACTGACTTTACTTCCCCCTCAGAGGCTGGGGGCCCAGGAAATCCCCACGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTTTACTTCCCCCTCAGAGGCTGGGGGCCCAGGAAATCCCCACGT  400

seq1  GGGCTTCATTTGTCCTATGGTCAGTGGCTGGTGAATTAGGAGCCCAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCATTTGTCCTATGGTCAGTGGCTGGTGAATTAGGAGCCCAGAGG  450

seq1  ATGGGGATGCTCGTAGGCAAGGGTCCTGGGGTCTCAAGGGCTTTAAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGATGCTCGTAGGCAAGGGTCCTGGGGTCTCAAGGGCTTTAAATGG  500

seq1  TTCTCACGTGCACTGGTAAGCTTTCTGAATGTGCCAGCCTGGAGTAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACGTGCACTGGTAAGCTTTCTGAATGTGCCAGCCTGGAGTAGAGA  550

seq1  ACCATATACCACCACAGGGTCAGAAGGGAATGCTGTGTGGGGAGAAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATACCACCACAGGGTCAGAAGGGAATGCTGTGTGGGGAGAAATGG  600

seq1  TTGAGTGGAAAATTAGTTTTTTCTTCCCAGTAATTGTTTTGACATGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGGAAAATTAGTTTTTTCTTCCCAGTAATTGTTTTGACATGAGCA  650

seq1  GTAATTAGCCAACAGCTGACAGGCTGGAACTGAAGAAAGAACAAGAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAGCCAACAGCTGACAGGCTGGAACTGAAGAAAGAACAAGAGGAT  700

seq1  GGATTAAAGGCAGGATGCCTGGGCATTAGCGGGC-TCCTGGCATGGC-TG  748
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  GGATTAAAGGCAGGATGCCTGGGCATTAGCGGGCTTCCTGGCATGGCTTG  750

seq1  AGAGTCAGAAGAGCCAGGGTTAGGTGACAGGATGCAGCTTATAGCATGCC  798
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAGTCAGAAGAGCCAGGGTTAGGTGACAGGATGCAGCTTATAGCATGTC  800

seq1  TAGTGGTTTCTGGGAAGAGGGAGGTCAGAAGGGCAGCCTCTGCCCTCGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTTTCTGGGAAGAGGGAGGTCAGAAGGGCAGCCTCTGCCCTCGAA  850

seq1  GAGCTGGAAAACAAAGGGGCTTCTAGGGACTCCGTGACATCAAAGACCAT  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGCTGGAAAACAAAGGGGTTTCTAGGGACTCCGTGACATCAAAGACCAT  900

seq1  GGTGTGGCTACCTG-ATCGGAGAAAGCATGCTTTATTTCATCACCAGCTG  947
      ||||||||||| || ||| ||| |||| ||||||||||||||||||||||
seq2  GGTGTGGCTACTTGTATCTGAG-AAGC-TGCTTTATTTCATCACCAGCTG  948

seq1  AGCTATGATTTGTCTCTGTGGTAGAAAGTAGTCAGAGTATACAGGCTGAG  997
      ||||||||||||||   |||| || |||||||||||||||||  ||||||
seq2  AGCTATGATTTGTCCTCGTGGAAG-AAGTAGTCAGAGTATACCTGCTGAG  997

seq1  AGAAATGCCACATGTTTCTAGGTCTCAGAATAAC  1031
      ||||||| ||||||||||||||   | |||||||
seq2  AGAAATG-CACATGTTTCTAGGCTCCTGAATAAC  1030