BAC Information

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BAC

Clone NameB6Ng01-156E20
Chromosome11 (Build37)
Map Location 83,067,902 - 83,172,957
singlet/doubletdoublet
Overlap geneLOC435271, Slfn14, Pex12, Ap2b1
Upstream geneTmem132e, Cct6b, Ccdc16, Lig3, Rffl, Rad51l3, Fndc8, Nle1, Unc45b, Slfn5, Set8-ps, Slfn9, Slfn8, LOC668706, Slfn10, Slfn2, Slfn1, Slfn4, Slfn3, LOC100043636
Downstream geneRasl10b, OTTMUSG00000000934, 1700020L24Rik, Mmp28, Taf15, OTTMUSG00000000990, Ccl5, Ccl9, Ccl6, LOC194905, Ccl3, Ccl4, OTTMUSG00000000971, Expi, 1100001G20Rik, 2700008B19Rik, LOC676191, Tcf2, Ddx52, Ap1gbp1, Dusp14, Tada2l, OTTMUSG00000000997, Acaca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156E20.bB6Ng01-156E20.g
ACCDH950843DH950844
length1,1581,084
definitionDH950843|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E20, 5' end.DH950844|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,171,774 - 83,172,957)(83,067,902 - 83,069,004)
sequence
gaattcaccacctttccctccactagaggagaagcctgtaagaactggct
tgctcacaactttattcttagtacttggaataaagcctgatatatggtag
ccattcaatatgtatttattaaaggaaccagtgttctagtgaccatggaa
gtacatctaatggcaatagttcttaggagtcaattttgcaatgaatcgtt
ttagtggagaaaataatcaccaaaatgatggaagccaatgagctatctac
tacctggcctagaaccactgccaacattaatactatcagcacatatgaaa
gagccaagtaaaatgaactctccaggccaaacactttgctagaaaggtac
tacctgcatgctttggtttgtatttgttttgagacagaatgttgatatgt
ggatgcagatggccatttactgtctatcatagcctgccctagtctcaaag
caaaggccctcctacttcagcctcatcgagcttacacacccagcatctgt
atgattttggtatagaagagtgcctgcatgtcatttagctgcttggaagg
cacctatactttaccatgaaccaatgccaagcagatgaaaaggtgggatt
ttgtcagtccacctaaaagagtgtaagaggagcaatcttaattcctttcc
tgtaagatgaccttagccattttttattttcacaaatgaatatagttttc
ccattctccaatgcttatgcacctcttaataacacattagcctagacaca
catgtccacagaacacaagaggtgcagcatagagatatcccagagaaatc
agatctctcaaacagtcacacaatctacattgtgctctagcatgtcagtt
tgttctggactttcattaatcaccatgaagcaagactgacaccgtaagat
gagaaatcagccatgtcactcatgtcctctgtagtccaaaggacatcaac
caaagtaagactggattctactctggaacacaaattttgaatcatgtaat
gaatatatgatcatgtaagtttagaacaataaagttctctgaacacttga
tgacacatgaaatcaaccaacatgtatgatctatgtatacatgtgactca
ctaaagtctgtctgagaagcacctggccttccaccgctcttcttaacctg
actgcttc
gaattcaatgaaagatattcaactgagaagaaaagaagccaaaagtatat
tacaggctgtgtgcacccagctgaattctggagggggcgtgatcaaggct
cacattaaaaatcaaaactacagcttcaccagagatggaatgggactgga
tttggtaaattccttacccggtatcgtgcaccttcctcatgactatctag
acttcatgcagcacaaagactactttttcatttttgtgaaaccatggaag
ccaaatcagaaaggtccggggatcaccaccttgaaaacgaacttgtacaa
gagaatcttctcattctcagttgaactgaaagcagcgaatgcagtgcagt
tcctcaaatccagaccaagttcccatggaaaaacagtctgtaatgaaaca
ctaaatgaatgtctttccttatttaacagagactggcttgcctatgggga
gacattctgtttcactaaatccacacatgctgaagtaaaattgactccta
aggaaaagatttctcctaaggaaaagattttagagctccttcctcaaact
gtttctgcattttcaaacactgatgggggatatttgttcattggcttgga
tggcaaaacccagcaaattattggttttgaagcacagaagagcgatctcg
tgcttctagagagtgaaatagaaaagtgcatccaacagctgcctgtcact
cacttctgtgggaagaaggagaagataaaatacacatgcaaattcattga
agtgcacaaatccggagctgtgtgtgcatatgtgtgcgcgctcagagtgg
agagattctgctgtgcagtgttcgctgcagagcccgagtcctggcacgtg
gaaggcggctgtgtgaagaggtttaccacagaggaatgggtgaagcgcca
gatggatgccacagcagtagagggacgagattataatcagtttacattgg
gctgaggggtgaagatgcttctgggcttggcaactgaaactcctcacata
ctgaagacccctttgggaccccaccctagtctcggagtgagagagcacca
aggaaaactaggattcatcttgctgaaatcccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_83171774_83172957
seq2: B6Ng01-156E20.b_46_1203 (reverse)

seq1  GAAGCAGTCCAGGTGCTATGAAGGAGCGGTGTGAAGCGCAGGGGTTGCTT  50
      |||||||| |||||  || ||| |||||||| ||||  ||||   |||||
seq2  GAAGCAGT-CAGGT--TAAGAA-GAGCGGTG-GAAGGCCAGG---TGCTT  42

seq1  CTTCAGAACCAGAACTTTAGTGAGTCACATGTTATAACATAGATTCATTA  100
      | |||||  ||| |||||||||||||||||| ||| ||||||| ||| ||
seq2  C-TCAGA--CAG-ACTTTAGTGAGTCACATG-TAT-ACATAGA-TCA-TA  84

seq1  CATGTTTGGTTTTGATTTCATTGTTGGTCATCAAGTGTTCAGAGAACTTT  150
      |||||| |   ||||||||| |||  ||||||||||||||||||||| ||
seq2  CATGTTGG---TTGATTTCA-TGT--GTCATCAAGTGTTCAGAGAAC-TT  127

seq1  TATTGTTTCTAAAACTTACATGATCATATATTCAATTACATGATTCAAAA  200
      ||||| |||| |||||||||||||||||||||| ||||||||||||||||
seq2  TATTG-TTCT-AAACTTACATGATCATATATTC-ATTACATGATTCAAAA  174

seq1  TTTGTGTTCCAGAGTAGAATCCAGTCTTACTTTGGTTGATGTCCTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTCCAGAGTAGAATCCAGTCTTACTTTGGTTGATGTCCTTTGGA  224

seq1  CTACAGAGGACATGAGTGACATGGCTGATTTCTCATCTTACGGTGTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGGACATGAGTGACATGGCTGATTTCTCATCTTACGGTGTCAGT  274

seq1  CTTGCTTCATGGTGATTAATGAAAGTCCAGAACAAACTGACATGCTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCATGGTGATTAATGAAAGTCCAGAACAAACTGACATGCTAGAG  324

seq1  CACAATGTAGATTGTGTGACTGTTTGAGAGATCTGATTTCTCTGGGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGTAGATTGTGTGACTGTTTGAGAGATCTGATTTCTCTGGGATAT  374

seq1  CTCTATGCTGCACCTCTTGTGTTCTGTGGACATGTGTGTCTAGGCTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGCTGCACCTCTTGTGTTCTGTGGACATGTGTGTCTAGGCTAATG  424

seq1  TGTTATTAAGAGGTGCATAAGCATTGGAGAATGGGAAAACTATATTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTAAGAGGTGCATAAGCATTGGAGAATGGGAAAACTATATTCATT  474

seq1  TGTGAAAATAAAAAATGGCTAAGGTCATCTTACAGGAAAGGAATTAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATAAAAAATGGCTAAGGTCATCTTACAGGAAAGGAATTAAGAT  524

seq1  TGCTCCTCTTACACTCTTTTAGGTGGACTGACAAAATCCCACCTTTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTCTTACACTCTTTTAGGTGGACTGACAAAATCCCACCTTTTCAT  574

seq1  CTGCTTGGCATTGGTTCATGGTAAAGTATAGGTGCCTTCCAAGCAGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGCATTGGTTCATGGTAAAGTATAGGTGCCTTCCAAGCAGCTAA  624

seq1  ATGACATGCAGGCACTCTTCTATACCAAAATCATACAGATGCTGGGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGCAGGCACTCTTCTATACCAAAATCATACAGATGCTGGGTGTG  674

seq1  TAAGCTCGATGAGGCTGAAGTAGGAGGGCCTTTGCTTTGAGACTAGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCGATGAGGCTGAAGTAGGAGGGCCTTTGCTTTGAGACTAGGGCA  724

seq1  GGCTATGATAGACAGTAAATGGCCATCTGCATCCACATATCAACATTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGATAGACAGTAAATGGCCATCTGCATCCACATATCAACATTCTG  774

seq1  TCTCAAAACAAATACAAACCAAAGCATGCAGGTAGTACCTTTCTAGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAACAAATACAAACCAAAGCATGCAGGTAGTACCTTTCTAGCAAA  824

seq1  GTGTTTGGCCTGGAGAGTTCATTTTACTTGGCTCTTTCATATGTGCTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGGCCTGGAGAGTTCATTTTACTTGGCTCTTTCATATGTGCTGAT  874

seq1  AGTATTAATGTTGGCAGTGGTTCTAGGCCAGGTAGTAGATAGCTCATTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAATGTTGGCAGTGGTTCTAGGCCAGGTAGTAGATAGCTCATTGG  924

seq1  CTTCCATCATTTTGGTGATTATTTTCTCCACTAAAACGATTCATTGCAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATCATTTTGGTGATTATTTTCTCCACTAAAACGATTCATTGCAAA  974

seq1  ATTGACTCCTAAGAACTATTGCCATTAGATGTACTTCCATGGTCACTAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTCCTAAGAACTATTGCCATTAGATGTACTTCCATGGTCACTAGA  1024

seq1  ACACTGGTTCCTTTAATAAATACATATTGAATGGCTACCATATATCAGGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGTTCCTTTAATAAATACATATTGAATGGCTACCATATATCAGGC  1074

seq1  TTTATTCCAAGTACTAAGAATAAAGTTGTGAGCAAGCCAGTTCTTACAGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCAAGTACTAAGAATAAAGTTGTGAGCAAGCCAGTTCTTACAGG  1124

seq1  CTTCTCCTCTAGTGGAGGGAAAGGTGGTGAATTC  1184
      ||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTCTAGTGGAGGGAAAGGTGGTGAATTC  1158

seq1: chr11_83067902_83069004
seq2: B6Ng01-156E20.g_64_1147

seq1  GAATTCAATGAAAGATATTCAACTGAGAAGAAAAGAAGCCAAAAGTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAAAGATATTCAACTGAGAAGAAAAGAAGCCAAAAGTATAT  50

seq1  TACAGGCTGTGTGCACCCAGCTGAATTCTGGAGGGGGCGTGATCAAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCTGTGTGCACCCAGCTGAATTCTGGAGGGGGCGTGATCAAGGCT  100

seq1  CACATTAAAAATCAAAACTACAGCTTCACCAGAGATGGAATGGGACTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAAAAATCAAAACTACAGCTTCACCAGAGATGGAATGGGACTGGA  150

seq1  TTTGGTAAATTCCTTACCCGGTATCGTGCACCTTCCTCATGACTATCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAAATTCCTTACCCGGTATCGTGCACCTTCCTCATGACTATCTAG  200

seq1  ACTTCATGCAGCACAAAGACTACTTTTTCATTTTTGTGAAACCATGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATGCAGCACAAAGACTACTTTTTCATTTTTGTGAAACCATGGAAG  250

seq1  CCAAATCAGAAAGGTCCGGGGATCACCACCTTGAAAACGAACTTGTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCAGAAAGGTCCGGGGATCACCACCTTGAAAACGAACTTGTACAA  300

seq1  GAGAATCTTCTCATTCTCAGTTGAACTGAAAGCAGCGAATGCAGTGCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTTCTCATTCTCAGTTGAACTGAAAGCAGCGAATGCAGTGCAGT  350

seq1  TCCTCAAATCCAGACCAAGTTCCCATGGAAAAACAGTCTGTAATGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATCCAGACCAAGTTCCCATGGAAAAACAGTCTGTAATGAAACA  400

seq1  CTAAATGAATGTCTTTCCTTATTTAACAGAGACTGGCTTGCCTATGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGAATGTCTTTCCTTATTTAACAGAGACTGGCTTGCCTATGGGGA  450

seq1  GACATTCTGTTTCACTAAATCCACACATGCTGAAGTAAAATTGACTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTGTTTCACTAAATCCACACATGCTGAAGTAAAATTGACTCCTA  500

seq1  AGGAAAAGATTTCTCCTAAGGAAAAGATTTTAGAGCTCCTTCCTCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGATTTCTCCTAAGGAAAAGATTTTAGAGCTCCTTCCTCAAACT  550

seq1  GTTTCTGCATTTTCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCATTTTCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGA  600

seq1  TGGCAAAACCCAGCAAATTATTGGTTTTGAAGCACAGAAGAGCGATCTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAACCCAGCAAATTATTGGTTTTGAAGCACAGAAGAGCGATCTCG  650

seq1  TGCTTCTAGAGAGTGAAATAGAAAAGTGCATCCAACAGCTGCCTGTCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTAGAGAGTGAAATAGAAAAGTGCATCCAACAGCTGCCTGTCACT  700

seq1  CACTTCTGTGGGAAGAAGGAGAAGATAAAATACACATGCAAATTCATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTGGGAAGAAGGAGAAGATAAAATACACATGCAAATTCATTGA  750

seq1  AGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGCGCGCTCAGAGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGCGCGCTCAGAGTGG  800

seq1  AGAGATTCTGCTGTGCAGTGTTCGCTGCAGAGCCCGAGTCCTGGCACGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCTGCTGTGCAGTGTTCGCTGCAGAGCCCGAGTCCTGGCACGTG  850

seq1  GAAGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTGAAGCGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTGAAGCGCCA  900

seq1  GATGGATGCCACAGCAGGTAGAGGGACGGAGATTAATAATCAGTTTACAT  950
      |||||||||||||||| |||||||||| |||||| |||||||||||||||
seq2  GATGGATGCCACAGCA-GTAGAGGGAC-GAGATT-ATAATCAGTTTACAT  947

seq1  TGGGCTGAGGGGGTTGGAAGATTGCTTTCTGGGCTTGGGCAACCTGAAAA  1000
      ||||||||||||    ||||| ||| |||||||||| ||||| ||| |||
seq2  TGGGCTGAGGGG---TGAAGA-TGC-TTCTGGGCTT-GGCAA-CTG-AAA  989

seq1  CTCCTCACATACTGTAAGACCCCCTTTTGGGGACCCCCACTCTAGTCTCG  1050
      |||||||||||||| ||||||||  ||||||   |||||| |||||||| 
seq2  CTCCTCACATACTG-AAGACCCC--TTTGGG--ACCCCACCCTAGTCTC-  1033

seq1  GGAGTGAGAGAGCACCCAAAGAAACACTAGAATCCATCTTGCTGTAATCA  1100
      ||||||||||||||||  ||| || ||||| || |||||||||| |||| 
seq2  GGAGTGAGAGAGCACC--AAGGAAAACTAGGATTCATCTTGCTGAAATCC  1081

seq1  CAT  1103
      |||
seq2  CAT  1084