BAC Information

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BAC

Clone NameB6Ng01-156M10
Chromosome11 (Build37)
Map Location 67,740,841 - 67,741,958
singlet/doubletsinglet
Overlap geneWdr16
Upstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43
Downstream geneStx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156M10.bB6Ng01-156M10.g
ACCDH951190DH951191
length1,0931,227
definitionDH951190|Mus musculus domesticus DNA, BAC clone: B6Ng01-156M10, 5' end.DH951191|Mus musculus domesticus DNA, BAC clone: B6Ng01-156M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccgggtggtaacaaacacactggaatagggtgttggccagga
tcatctgattccttctaagtcgcctggaagtaaattcaaatgctatggaa
cctgactttgccccctcctgctcccccccccccgaaaaaaaacccttatt
tgtcacacagtgtgcagttggacaagcttggaaggggttgtttttttttt
ttctctgacttcttatgctaatcacacaatagaacttgggtttggtgggg
tttcttgtttgtttgttttgggttttgttgttttcattttgtttctgttt
ttgtttttgtcgagacagatatctgcagagctggagagatggttcagtta
agatcatgtactgctcttgcaggggaccaaactcaggttcccagaatagg
catcaggccactcacaattgcctataaatttattccaagaaatctgatgc
cctcttttggctaaacatgtatgtacatgtaatttaaaaaaaaaattttt
taatagactcctagctgctttatcctgtacttatgtcttctcccaccaaa
tctgtcaccaattgtaaaaaggcacaggcaaaaggtgattccccttccta
aagacacggcatgaaactagagcaacagtaaactctagacagaaggatgg
agaaggtgctgattcaggtccagcccatcacctctcacacaaaaacctgg
attcccaaggccacctttggagtcacgtggtagtccctagactctgaatg
ccaaagggtggggaaagcttgtttcaaagggatatttattgggcccaccc
gttctgatctggagtcagaatgctgggatggaaggccagagatctgtatc
tgaagtcagccattccactgactgttatgtgacacaagtttgagatccct
gccttagacaccacagaaaaatgcatgttcagactcagcagcattccact
gactgtatgtgcaccaagtttgaagatctcctgcttaacaccacaaaaaa
acagcagttcgactttggtggactcaggaattgccatagatttttcacct
aaatctccagaatcaatggtctgaattctgaacttgtcatatt
gaattccctgataagagtagtttttgttatctttaagaaatgcttttaga
tttgtggcaaggagatgattcctaggagacctttaagtaatttgagagga
ggactagctctatgcatgattagagcactgaaagtttcaggcccaagctc
accttcagtggtggcgaaggaggctggttgtaccatggccaatgatcaat
caagtactgaagcctccacgaaaacccaccagcaaggtcctgacagcttt
gagggcagggaacacatggatgtgctctgagcacggcacacgtggaaagg
gcatggagactctgcacctcctccccgacaccttgccacattcactacac
tacttggctcttccagagtggcaactactacaataaaaccctataagcac
ggcaccttcctgagctctgtgaatgttctcataaagtacccaattcagaa
gaagagtcacgggaatttgtagccaagcagatagaagtgcctagggacat
ctaggacttaatagctgtatctacactgggatggtctggggacactgagt
ctatagacctgtggagcatcaggaactgctggatgcccagggagagtcag
acagtagttagaatgacagactgtctttcctgttcccccattcgttccta
ctctgttaacaagcctctgtctatagacaaagactgtccaccctcaagta
cctaaaactacgaatacaaggaacaggattacctttcctcatctccctaa
ttgtattactttagggaaattcagccatgaaaggtagcaggtgataaggt
ggggtgccactcataggaagccaagcaacaacttccacggactccaaatg
aaacatctgttctagcaaagctttcagagacccagccactttggtaaaat
actttatatagctcctgttaattcataaaaacttgcctttgagttgtaga
cagtagagttcagcgtgttgccttcttccttcagagagcacattacgctg
cagagatgatcctttttctttaggatgcagacacagagacccagaggaga
gctatcatggacagttcttcagaagactctacttgttcaaagacgagact
tggctgttatggacacccaacgtagtaactccactgaacacatgaccgat
gggccgccactcacacactacgccactgtgaccagtgcgaacgatacgta
tccacctacgtaccaaatgagttagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67740841_67741958
seq2: B6Ng01-156M10.b_46_1138

seq1  GAATTCTTCCGGGTGGTAACAAACACACTGGAATAGGGTGTTGGCCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCGGGTGGTAACAAACACACTGGAATAGGGTGTTGGCCAGGA  50

seq1  TCATCTGATTCCTTCTAAGTCGCCTGGAAGTAAATTCAAATGCTATGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGATTCCTTCTAAGTCGCCTGGAAGTAAATTCAAATGCTATGGAA  100

seq1  CCTGACTTTGCCCCCTCCTGCTCCCCCCCCCCCGAAAAAAAACCCTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTTGCCCCCTCCTGCTCCCCCCCCCCCGAAAAAAAACCCTTATT  150

seq1  TGTCACACAGTGTGCAGTTGGACAAGCTTGGAAGGGGTTGTTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACAGTGTGCAGTTGGACAAGCTTGGAAGGGGTTGTTTTTTTTTT  200

seq1  TTCTCTGACTTCTTATGCTAATCACACAATAGAACTTGGGTTTGGTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGACTTCTTATGCTAATCACACAATAGAACTTGGGTTTGGTGGGG  250

seq1  TTTCTTGTTTGTTTGTTTTGGGTTTTGTTGTTTTCATTTTGTTTCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTTTGTTTGTTTTGGGTTTTGTTGTTTTCATTTTGTTTCTGTTT  300

seq1  TTGTTTTTGTCGAGACAGATATCTGCAGAGCTGGAGAGATGGTTCAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGTCGAGACAGATATCTGCAGAGCTGGAGAGATGGTTCAGTTA  350

seq1  AGATCATGTACTGCTCTTGCAGGGGACCAAACTCAGGTTCCCAGAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATGTACTGCTCTTGCAGGGGACCAAACTCAGGTTCCCAGAATAGG  400

seq1  CATCAGGCCACTCACAATTGCCTATAAATTTATTCCAAGAAATCTGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGCCACTCACAATTGCCTATAAATTTATTCCAAGAAATCTGATGC  450

seq1  CCTCTTTTGGCTAAACATGTATGTACATGTAATTTAAAAAAAAATTTTTT  500
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCTCTTTTGGCTAAACATGTATGTACATGTAATTTAAAAAAAAAATTTTT  500

seq1  TAATAGACTCCTAGCTGCTTTATCCTGTACTTATGTCTTCTCCCACCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGACTCCTAGCTGCTTTATCCTGTACTTATGTCTTCTCCCACCAAA  550

seq1  TCTGTCACCAATTGTAAAAAGGCACAGGCAAAAGGTGATTCCCCTTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACCAATTGTAAAAAGGCACAGGCAAAAGGTGATTCCCCTTCCTA  600

seq1  AAGACACGGCATGAAACTAGAGCAACAGTAAACTCTAGACAGAAGGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACGGCATGAAACTAGAGCAACAGTAAACTCTAGACAGAAGGATGG  650

seq1  AGAAGGTGCTGATTCAGGTCCAGCCCATCACCTCTCACACAAAAACCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGCTGATTCAGGTCCAGCCCATCACCTCTCACACAAAAACCTGG  700

seq1  ATTCCCAAGGCCACCTTTGGAGTCACGTGGTAGTCCCTAGACTCTGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAGGCCACCTTTGGAGTCACGTGGTAGTCCCTAGACTCTGAATG  750

seq1  CCAAAGGGTGGGGAAAGCTTGTTTCAAAGGGATA-TTATTGGGCCCACCC  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCAAAGGGTGGGGAAAGCTTGTTTCAAAGGGATATTTATTGGGCCCACCC  800

seq1  GTTCTGATCTGGAGTCAGAAGGCTGGGATGGAAGGCCAGAGATCTGTATC  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTCTGATCTGGAGTCAGAATGCTGGGATGGAAGGCCAGAGATCTGTATC  850

seq1  TGAAGTCAGCCATTCCACTGACTGTTATGTGCACACAAGTTTGAGATCCC  899
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  TGAAGTCAGCCATTCCACTGACTGTTATGTG-ACACAAGTTTGAGAT-CC  898

seq1  CTGCCTTAGACACCACAGAAAAACAGCATGTTTCAGACTTCAGCCAGCCA  949
      |||||||||||||||||||||||  ||||| ||||||| |||| ||| ||
seq2  CTGCCTTAGACACCACAGAAAAA-TGCATG-TTCAGAC-TCAG-CAG-CA  943

seq1  TTCCACTGACTGTTATGTGCACACAAGTTTG-AGATCCCCTGCCTTAGAC  998
      |||||||||||| ||||||||| |||||||| ||||| |||| |||| ||
seq2  TTCCACTGACTG-TATGTGCAC-CAAGTTTGAAGATCTCCTG-CTTA-AC  989

seq1  ACCACAGAAAAACAGCATGTTTCAGACTTTGGTGGACTCAGGAATATGCA  1048
      |||||| |||||||||| |||   |||||||||||||||||||||   ||
seq2  ACCACAAAAAAACAGCA-GTT--CGACTTTGGTGGACTCAGGAATTGCCA  1036

seq1  TAGACTTTTCCACCTAAACATCCCTAGGAAATCTAAAATGGTCTGAACTC  1098
      |||| |||| |||||||  ||| | ||  ||||   ||||||||||| ||
seq2  TAGA-TTTTTCACCTAA--ATCTCCAG--AATC---AATGGTCTGAATTC  1078

seq1  TGAAACTTTTTGTCAGTATT  1118
      ||||     |||||| ||||
seq2  TGAA----CTTGTCA-TATT  1093