BAC Information

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BAC

Clone NameB6Ng01-156P08
Chromosome11 (Build37)
Map Location 93,559,699 - 93,702,352
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382545, LOC100039286, Car10, LOC629636
Downstream geneUtp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156P08.bB6Ng01-156P08.g
ACCDH951320DH951321
length9151,140
definitionDH951320|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P08, 5' end.DH951321|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,701,441 - 93,702,352)(93,559,699 - 93,560,855)
sequence
gaattcatcaggggagttctgaggacccaccaaatgcctactccttagtt
cccaggaagcctaggtctcctcacttctttctggtcccatcactcgcgtc
acctcccatgatggggaggtatcctgcctgtccccagtcagccagtggga
cagccgagcttggttggaggtgtgatggcccaggaagtctgtggctgata
aaccctaggtgctcatgggaaaggaagggtaggtggcagttctacttagg
cacaatgaatataattgccactggcatttgctgtccctctaaatcccctc
aaacgatccttgtctcaagaggggacaccttcgcagggagatggcattca
gctcagacaaccaattgaggcttcatttgtccctccttgatattaataat
tcccgactcccaaggcctccagaagctacttcaatcagatgcgctgggag
gagaaaggtcagactgggagggttcactccacaaaggaatgtggagggaa
gctggtttttcttctgtctggagcaagtcccttctcgtgcttccttatca
gttgcagcattggaagagtaactaaaaaaaagaaagagcaatgagcaaaa
gaatctaagaggtaaaggcacctggaaagcaagggaaagaaagatggtgt
tgatggagcactggaagttttcttgaattcagtcagtttggattcttcca
gagtgtcttagcatggattctgtgattatcttcatttttgaggtggggag
gggagaaagagagacctgctgaggtttaaagatcttgccccagctgttgg
gattaaacattgtgagaaggtaaactctatgttcttttttattcttctaa
tgttcaccaaactagcttctcaaatcagggcttcagtgaattgtgatctt
taggctaagtgcctt
gaattctattattgttcttgtgaacctaggtttattccccaaaactatga
catgaagaactacagacaaaacttgaaaagaaatacatgcaccacaccca
caatatcctgctcatggctttcctgggtcctccaaaaggctctgcagtac
attgtgtagcccctccccaccattaactctctgtccttaaatctcaccct
cagtgctccttatgccccacccactgtcatagctcctcccactccacact
ctgcactagcaggggcttcttcctaggacatcttttctcagaaatccatg
tgcctcaccattccctcctatccagagcttagacaaggtctgccccagcc
accctatgtggatcttactccttccaagcatccccctggccccttaattc
tgccttatggttttccagagcattcaatgccatataccttcctatacaac
ttattttgttttttgattttttttccagtgtattaactgtccccttcaag
cagactgaagatccatctcaagtacaatgctttgttccttttttgattct
gtgtcaacaaatgttccagcaaaacaaagtctttccagaattttcatatt
cttacacactgctcaattccttctggggtatgcactgcccacaactcagt
tccttccctgttaatcccttgttaacagttctggatgcttgatgcctaaa
agcaaggcattatcaaattctgtgtcaggtaggggcctgatccataggcc
acaatcttttcactgtggtctctcaaatcagaaaggggaagagagcactt
gtgcccattttataaaaggacaccaatctcatttttaactgttccccctc
gtgactatctctctctcacaggctccacctgctaagatcacctcactgag
tactgggcttcaatttgatttttgacagacaaacattcagcccacacaca
agccaagggcagtgaacactcagaagcaggactttctgaagtgtggggtc
taagaagcagcagaggccagaacagatcatggcttgaggtatcatccaga
ccagacagtgagaaaagcagcagagcagatgaaaccagcctcaagacatc
gaagaagaatgtttttacagagtcctgggttacattttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93701441_93702352
seq2: B6Ng01-156P08.b_49_963 (reverse)

seq1  AAGGCACTTAGCCTATAGATCACAATTCACTG-AGCCCTGATTTTGAG-A  48
      ||||||||||||||| |||||||||||||||| |||||||| |||||| |
seq2  AAGGCACTTAGCCTAAAGATCACAATTCACTGAAGCCCTGA-TTTGAGAA  49

seq1  GCTGTGTTTGGTAGACATTAGAAGAAT-AAAAAGAACATAGAGTTTACCT  97
      |||  |||||||  ||||||||||||| ||||||||||||||||||||||
seq2  GCT-AGTTTGGTGAACATTAGAAGAATAAAAAAGAACATAGAGTTTACCT  98

seq1  TCTCACAATGCTTAATCCCAACAGCT-GGGCAAGATCTTT-AACCTCAGC  145
      |||||||||| ||||||||||||||| ||||||||||||| |||||||||
seq2  TCTCACAATGTTTAATCCCAACAGCTGGGGCAAGATCTTTAAACCTCAGC  148

seq1  AGGTCTCTCTTTCTCCCCTCCCCACCTCAAAAATGAAGATAATCACAGAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCTCTTTCTCCCCTCCCCACCTCAAAAATGAAGATAATCACAGAA  198

seq1  TCCATGCTAAGACACTCTGGAAGAATCCAAACTGACTGAATTCAAGAAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCTAAGACACTCTGGAAGAATCCAAACTGACTGAATTCAAGAAAA  248

seq1  CTTCCAGTGCTCCATCAACACCATCTTTCTTTCCCTTGCTTTCCAGGTGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTGCTCCATCAACACCATCTTTCTTTCCCTTGCTTTCCAGGTGC  298

seq1  CTTTACCTCTTAGATTCTTTTGCTCATTGCTCTTTCTTTTTTTTAGTTAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTCTTAGATTCTTTTGCTCATTGCTCTTTCTTTTTTTTAGTTAC  348

seq1  TCTTCCAATGCTGCAACTGATAAGGAAGCACGAGAAGGGACTTGCTCCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAATGCTGCAACTGATAAGGAAGCACGAGAAGGGACTTGCTCCAG  398

seq1  ACAGAAGAAAAACCAGCTTCCCTCCACATTCCTTTGTGGAGTGAACCCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAAAAACCAGCTTCCCTCCACATTCCTTTGTGGAGTGAACCCTC  448

seq1  CCAGTCTGACCTTTCTCCTCCCAGCGCATCTGATTGAAGTAGCTTCTGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGACCTTTCTCCTCCCAGCGCATCTGATTGAAGTAGCTTCTGGA  498

seq1  GGCCTTGGGAGTCGGGAATTATTAATATCAAGGAGGGACAAATGAAGCCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGGAGTCGGGAATTATTAATATCAAGGAGGGACAAATGAAGCCT  548

seq1  CAATTGGTTGTCTGAGCTGAATGCCATCTCCCTGCGAAGGTGTCCCCTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGTTGTCTGAGCTGAATGCCATCTCCCTGCGAAGGTGTCCCCTCT  598

seq1  TGAGACAAGGATCGTTTGAGGGGATTTAGAGGGACAGCAAATGCCAGTGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAAGGATCGTTTGAGGGGATTTAGAGGGACAGCAAATGCCAGTGG  648

seq1  CAATTATATTCATTGTGCCTAAGTAGAACTGCCACCTACCCTTCCTTTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATATTCATTGTGCCTAAGTAGAACTGCCACCTACCCTTCCTTTCC  698

seq1  CATGAGCACCTAGGGTTTATCAGCCACAGACTTCCTGGGCCATCACACCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCACCTAGGGTTTATCAGCCACAGACTTCCTGGGCCATCACACCT  748

seq1  CCAACCAAGCTCGGCTGTCCCACTGGCTGACTGGGGACAGGCAGGATACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAGCTCGGCTGTCCCACTGGCTGACTGGGGACAGGCAGGATACC  798

seq1  TCCCCATCATGGGAGGTGACGCGAGTGATGGGACCAGAAAGAAGTGAGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCATGGGAGGTGACGCGAGTGATGGGACCAGAAAGAAGTGAGGA  848

seq1  GACCTAGGCTTCCTGGGAACTAAGGAGTAGGCATTTGGTGGGTCCTCAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGGCTTCCTGGGAACTAAGGAGTAGGCATTTGGTGGGTCCTCAGA  898

seq1  ACTCCCCTGATGAATTC  912
      |||||||||||||||||
seq2  ACTCCCCTGATGAATTC  915

seq1: chr11_93559699_93560855
seq2: B6Ng01-156P08.g_70_1209

seq1  GAATTCTATTATTGTTCTTGTGAACCTAGGTTTATTCCCCAAAACTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTATTGTTCTTGTGAACCTAGGTTTATTCCCCAAAACTATGA  50

seq1  CATGAAGAACTACAGACAAAACTTGAAAAGAAATACATGCACCACACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGAACTACAGACAAAACTTGAAAAGAAATACATGCACCACACCCA  100

seq1  CAATATCCTGCTCATGGCTTTCCTGGGTCCTCCAAAAGGCTCTGCAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCCTGCTCATGGCTTTCCTGGGTCCTCCAAAAGGCTCTGCAGTAC  150

seq1  ATTGTGTAGCCCCTCCCCACCATTAACTCTCTGTCCTTAAATCTCACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTAGCCCCTCCCCACCATTAACTCTCTGTCCTTAAATCTCACCCT  200

seq1  CAGTGCTCCTTATGCCCCACCCACTGTCATAGCTCCTCCCACTCCACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCCTTATGCCCCACCCACTGTCATAGCTCCTCCCACTCCACACT  250

seq1  CTGCACTAGCAGGGGCTTCTTCCTAGGACATCTTTTCTCAGAAATCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTAGCAGGGGCTTCTTCCTAGGACATCTTTTCTCAGAAATCCATG  300

seq1  TGCCTCACCATTCCCTCCTATCCAGAGCTTAGACAAGGTCTGCCCCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACCATTCCCTCCTATCCAGAGCTTAGACAAGGTCTGCCCCAGCC  350

seq1  ACCCTATGTGGATCTTACTCCTTCCAAGCATCCCCCTGGCCCCTTAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATGTGGATCTTACTCCTTCCAAGCATCCCCCTGGCCCCTTAATTC  400

seq1  TGCCTTATGGTTTTCCAGAGCATTCAATGCCATATACCTTCCTATACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATGGTTTTCCAGAGCATTCAATGCCATATACCTTCCTATACAAC  450

seq1  TTATTTTGTTTTTTGATTTTTTTTCCAGTGTATTAACTGTCCCCTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGTTTTTTGATTTTTTTTCCAGTGTATTAACTGTCCCCTTCAAG  500

seq1  CAGACTGAAGATCCATCTCAAGTACAATGCTTTGTTCCTTTTTTGATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGAAGATCCATCTCAAGTACAATGCTTTGTTCCTTTTTTGATTCT  550

seq1  GTGTCAACAAATGTTCCAGCAAAACAAAGTCTTTCCAGAATTTTCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACAAATGTTCCAGCAAAACAAAGTCTTTCCAGAATTTTCATATT  600

seq1  CTTACACACTGCTCAATTCCTTCTGGGGTATGCACTGCCCACAACTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACACTGCTCAATTCCTTCTGGGGTATGCACTGCCCACAACTCAGT  650

seq1  TCCTTCCCTGTTAATCCCTTGTTAACAGTTCTGGATGCTTGATGCCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCTGTTAATCCCTTGTTAACAGTTCTGGATGCTTGATGCCTAAA  700

seq1  AGCAAGGCATTATCAAATTCTGTGTCAGGTAGGGGCCTGATCCATAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCATTATCAAATTCTGTGTCAGGTAGGGGCCTGATCCATAGGCC  750

seq1  ACAATCTTTTCACTGTGGTCTCTCAAATCAGAAAGGGGAAGAGAGCACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTTTTCACTGTGGTCTCTCAAATCAGAAAGGGGAAGAGAGCACTT  800

seq1  GTGCCCATTTTATAAAAGGACACCAATCTCATTTTTAACTGTTCCCCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCATTTTATAAAAGGACACCAATCTCATTTTTAACTGTTCCCCCTC  850

seq1  GTGACTATCTCTCTCTCACAGGCTCCACCTGCTAAGATCACCTCACTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATCTCTCTCTCACAGGCTCCACCTGCTAAGATCACCTCACTGAG  900

seq1  TACTGGGCTTCAAATTTGATTTTTGACAGACAAACATTCAGCCCACAACA  950
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  TACTGGGCTTC-AATTTGATTTTTGACAGACAAACATTCAGCCCAC-ACA  948

seq1  CAAGCCAAGGGCAGTGAACACTCAGAAGGCAGGAACTTTCTGAAGTGTGG  1000
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  CAAGCCAAGGGCAGTGAACACTCAGAA-GCAGG-ACTTTCTGAAGTGTGG  996

seq1  GGTCTAAAGAAGCAGGCAGAGGCCAGAACAGAGCCATGGCTTGAGGTATC  1050
      ||||| |||||||| |||||||||||||||||  ||||||||||||||| 
seq2  GGTCT-AAGAAGCA-GCAGAGGCCAGAACAGA-TCATGGCTTGAGGTAT-  1042

seq1  CACCCAGACACAGACCAGTGAGAAAAGCAAGGCAGAGGCAAGATAGACAC  1100
      || |||||| |||| ||||||||||||||  ||||||   ||||  |  |
seq2  CATCCAGAC-CAGA-CAGTGAGAAAAGCA--GCAGAG--CAGATGAAACC  1086

seq1  AGCCCCAAGACATCGAAGAGGAAATGTTTTTACAGAGTCCCTGGGGTCAC  1150
      |||| |||||||||||||| | ||||||||||||||||||   |||| ||
seq2  AGCCTCAAGACATCGAAGAAG-AATGTTTTTACAGAGTCC--TGGGTTAC  1133

seq1  ATTTTCT  1157
      |||||||
seq2  ATTTTCT  1140