BAC Information

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BAC

Clone NameB6Ng01-158G05
Chromosome11 (Build37)
Map Location 64,397,736 - 64,504,618
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
Downstream geneLOC626959, Elac2, AU040829, 1700086D15Rik, LOC100041790, Myocd, Map2k4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158G05.bB6Ng01-158G05.g
ACCDH952347DH952348
length1,1501,126
definitionDH952347|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G05, 5' end.DH952348|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,397,736 - 64,398,706)(64,503,482 - 64,504,618)
sequence
gaattcaatgggcttcaaagacacgtatcagcagaacccaagtgatgaat
tgttctaaagtctgcataggaaaacaaaggacctgaggtaaccggaacac
tttctacaagaactggaaggactaacagtgtttaattctaagatttcgat
catcattaatacagaattgtaaaagagacagacaatcgaggtagaagact
tcacagcacagagaatcaagaagctgttcaaaatgtatgctaacaactat
tttttgatgttggtatagcataattttttgtaagaatgatagtattttca
aacagacttgatataaaaaaaggaatgaacatgaattccagaccatacca
tgcaccagatagagaaattagataaaaatggatcatatgatctcatgtaa
aagcaaaattacaaaatttctaaaatgatacagagggcaatttttgatat
ttgtttatgttatgtttattgacattttgacatcataaagtaaaattatg
aactaggaaaggacaaatgagatgtacctcacagaaactggatggccttc
cttccattaaaagagaatacagagcttctctagagacttgcagaatatat
ttggaaagcccataacacttaataaagctttgcattcagaacatacgagt
ggcccttaaaacttgatagtaggaaagaaaacaacttcaggagaaaatag
acatcagatgaagggaagcaacagtacacatgaaaagccgttcaaatagt
taattagcaatagttaattacctgcagcacccaataagataaacaactgg
tagatgactgaaagtaaagaggttacactcaagtgctgagagctatatcc
aggaactaaactggttccacactgctgctaatggaacaccatgaacatgt
tgataaccagtttggagtctttttctgaagtcaacatcatgttttttgct
tgttttttgtttttgtatttttttaaagaaataatgtgggagtgagactg
tgacacattgacataggaggacagcttaatgtcattagcatttttatagg
taacatacatctaacaagccctgaatcgagagctagaagagaaatacatt
ctgatgattcctaaatgggaatctgactgatgtagctggggtattatggg

gaattcatcttcatagatacaaaatgttatgaatgataagattcaccagg
acttcctacaggaataatttttactattttcctatccccccccccatgcc
ccagaggcttaactacccaggctcacattatgttctctgggttacaaatg
aatgcaattttcgaaaagtcaacagagacttgagctgtaaacctgcattt
gtttcagctaagctccttcacatacctcaggatctgggtaaagggatgtc
tttccacagttctttccaattctaatgagctctgaagaagtttatttcaa
aataatccttctgtattaagcgctggctcattgacaggtctgcttttatc
ataattgtaggaaggttattttcccaatgaaggtttgttttttcatggaa
ttccgaggttttgcattgtgtatatgaggcaattagtttgggatttttgg
aatttattttagacctgacagatgtcttcaatttacacactctaggaggt
gacaaaccccattaacatttgaaagctatcaatttagtttatctttcttc
ccagtctccaagttatgagccaagagaccctgtcttttgtttgttccctg
tttgctcgctctcactctctctttttctccctcccttctttcttatccct
ctctcttctctatttttatgtgtacaaaaaggaaatttgtctcagtcaga
atctagttggttatgaattatatttgatgaggtatgatttttttttctga
ctaaaatatgttcccttttgcagtccgcagttgtgactactgtcttacag
ttttgttcttccaccttctcctctgttggttaattaactctgggtcctgc
tctctttcttggtcttgtatagttaagagtcactgagatgtgtagacttc
agcatgacttgggtgcccttccatttttcagtcaaatcctttacagcggg
cagctgcttcctcagtggagtgagttctccacatgccagtttgggatggg
attcaattgttctcatttggtttttactggagacttcacagtgtttgctt
gcttgtccactgggacattctgcagctactaatgaatcacgggaggggtg
gctggataccttcagtgttacttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64397736_64398706
seq2: B6Ng01-158G05.b_249_1194

seq1  AGCACAGAGAATCAAGAAGCTGTTCAAAATGTATGCTAACAACTATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGAATCAAGAAGCTGTTCAAAATGTATGCTAACAACTATTTTT  50

seq1  TGATGTTGGTATAGCATAATTTTTTGTAAGAATGATAGTATTTTCAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTGGTATAGCATAATTTTTTGTAAGAATGATAGTATTTTCAAACA  100

seq1  GACTTGATATAAAAAAAGGAATGAACATGAATTCCAGACCATACCATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGATATAAAAAAAGGAATGAACATGAATTCCAGACCATACCATGCA  150

seq1  CCAGATAGAGAAATTAGATAAAAATGGATCATATGATCTCATGTAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAGAGAAATTAGATAAAAATGGATCATATGATCTCATGTAAAAGC  200

seq1  AAAATTACAAAATTTCTAAAATGATACAGAGGGCAATTTTTGATATTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACAAAATTTCTAAAATGATACAGAGGGCAATTTTTGATATTTGT  250

seq1  TTATGTTATGTTTATTGACATTTTGACATCATAAAGTAAAATTATGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTATGTTTATTGACATTTTGACATCATAAAGTAAAATTATGAACT  300

seq1  AGGAAAGGACAAATGAGATGTACCTCACAGAAACTGGATGGCCTTCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGACAAATGAGATGTACCTCACAGAAACTGGATGGCCTTCCTTC  350

seq1  CATTAAAAGAGAATACAGAGCTTCTCTAGAGACTTGCAGAATATATTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGAGAATACAGAGCTTCTCTAGAGACTTGCAGAATATATTTGG  400

seq1  AAAGCCCATAACACTTAATAAAGCTTTGCATTCAGAACATACGAGTGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCATAACACTTAATAAAGCTTTGCATTCAGAACATACGAGTGGCC  450

seq1  CTTAAAACTTGATAGTAGGAAAGAAAACAACTTCAGGAGAAAATAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACTTGATAGTAGGAAAGAAAACAACTTCAGGAGAAAATAGACAT  500

seq1  CAGATGAAGGGAAGCAACAGTACACATGAAAAGCCGTTCAAATAGTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAGGGAAGCAACAGTACACATGAAAAGCCGTTCAAATAGTTAAT  550

seq1  TAGCAATAGTTAATTACCTGCAGCACCCAATAAGATAAACAACTGGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATAGTTAATTACCTGCAGCACCCAATAAGATAAACAACTGGTAGA  600

seq1  TGACTGAAAGTAAAGAGGTTACACTCAAGTGCTGAGAGCTATATCCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAAAGTAAAGAGGTTACACTCAAGTGCTGAGAGCTATATCCAGGA  650

seq1  ACTAAACTGGTTCCACACTGCTGCTAATGGAACACCATGAACATGTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTGGTTCCACACTGCTGCTAATGGAACACCATGAACATGTTGAT  700

seq1  AACCAGTTTGGAGTC-TTTTCTGAAGTCAACATCATGTTTTTTTGCTTGT  749
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  AACCAGTTTGGAGTCTTTTTCTGAAGTCAACATCATG-TTTTTTGCTTGT  749

seq1  TTTTTTGTTTTTTGTATTTTTTTTAAAGAAATAATGTGGGGAGTTGAGAA  799
      |||||   |||||||| |||||||||||||||||||| ||||| |||| |
seq2  TTTTT--GTTTTTGTA-TTTTTTTAAAGAAATAATGT-GGGAG-TGAG-A  793

seq1  CTGTTGACAACATTGACAATAGGAGGAACAGCTTAAATGTCAATTAAGCA  849
      ||| |||| |||||||| |||||||| ||||||| |||||||  | ||||
seq2  CTG-TGAC-ACATTGAC-ATAGGAGG-ACAGCTT-AATGTCA--TTAGCA  836

seq1  TTTTTATAGGTAAACATACATCTAACAAGGCCCTGAATCGAGAGGCTAGA  899
      ||||||||||| |||||||||||||||| |||||||||||||| ||||||
seq2  TTTTTATAGGT-AACATACATCTAACAA-GCCCTGAATCGAGA-GCTAGA  883

seq1  CAGAGAAATACATTCTGAATGATTCCCTAAATGGGAAAATCTGGAAACTG  949
       |||||||||||||||| |||||| ||||||||||  ||||||   ||||
seq2  -AGAGAAATACATTCTG-ATGATT-CCTAAATGGG--AATCTG---ACTG  925

seq1  ATATGTAGCTGGGG-ATTATGGG  971
        |||||||||||| ||||||||
seq2  --ATGTAGCTGGGGTATTATGGG  946

seq1: chr11_64503482_64504618
seq2: B6Ng01-158G05.g_67_1192 (reverse)

seq1  TTGAAGTAACAACTGGAGAGTTATCAG-CACACCTCCGCTGAGTCATCTA  49
      |||||||||| |||| || ||   ||| ||| |||||  ||| |||| ||
seq2  TTGAAGTAAC-ACTGAAG-GTATCCAGCCACCCCTCCCGTGATTCAT-TA  47

seq1  GTAGCTGCAGAATGTTCCCAGTGGACAAGCAAGCAAACACCTGTGAGGTC  99
      |||||||||||||| |||||||||||||||||||||||| |||||| |||
seq2  GTAGCTGCAGAATG-TCCCAGTGGACAAGCAAGCAAACA-CTGTGAAGTC  95

seq1  TTCCATGTGAAAACCAAATGAGAACAATTTGAATTCCCATCCCAAACTGG  149
       |||| || |||||||||||||||||| ||||| ||||||||||||||||
seq2  -TCCA-GTAAAAACCAAATGAGAACAA-TTGAA-TCCCATCCCAAACTGG  141

seq1  CATGTGGAGAACTTCACTCCAACTGAGGAAGCAGCTGCCCGCTGTAAAGG  199
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  CATGTGGAGAAC-TCACTCC-ACTGAGGAAGCAGCTGCCCGCTGTAAAGG  189

seq1  ATTTGACTGAAAAATGGAAGGGCACCCAAGTTCATGCTGAAGTCTACACA  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTTGACTGAAAAATGGAAGGGCACCCAAG-TCATGCTGAAGTCTACACA  238

seq1  TCTCAGTGACTCTTAACTATACAAGACCAAGAAAGAGAGCAGGACCCAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGACTCTTAACTATACAAGACCAAGAAAGAGAGCAGGACCCAGA  288

seq1  GTTAATTAACCAACAGAGGAGAAGGTGGAAGAACAAAACTGTAAGACAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTAACCAACAGAGGAGAAGGTGGAAGAACAAAACTGTAAGACAGT  338

seq1  AGTCACAACTGCGGACTGCAAAAGGGAACATATTTTAGTCAGAAAAAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAACTGCGGACTGCAAAAGGGAACATATTTTAGTCAGAAAAAAAA  388

seq1  ATCATACCTCATCAAATATAATTCATAACCAACTAGATTCTGACTGAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACCTCATCAAATATAATTCATAACCAACTAGATTCTGACTGAGAC  438

seq1  AAATTTCCTTTTTGTACACATAAAAATAGAGAAGAGAGAGGGATAAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCTTTTTGTACACATAAAAATAGAGAAGAGAGAGGGATAAGAAA  488

seq1  GAAGGGAGGGAGAAAAAGAGAGAGTGAGAGCGAGCAAACAGGGAACAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGGAGAAAAAGAGAGAGTGAGAGCGAGCAAACAGGGAACAAAC  538

seq1  AAAAGACAGGGTCTCTTGGCTCATAACTTGGAGACTGGGAAGAAAGATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGGGTCTCTTGGCTCATAACTTGGAGACTGGGAAGAAAGATAA  588

seq1  ACTAAATTGATAGCTTTCAAATGTTAATGGGGTTTGTCACCTCCTAGAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTGATAGCTTTCAAATGTTAATGGGGTTTGTCACCTCCTAGAGT  638

seq1  GTGTAAATTGAAGACATCTGTCAGGTCTAAAATAAATTCCAAAAATCCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAATTGAAGACATCTGTCAGGTCTAAAATAAATTCCAAAAATCCCA  688

seq1  AACTAATTGCCTCATATACACAATGCAAAACCTCGGAATTCCATGAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTGCCTCATATACACAATGCAAAACCTCGGAATTCCATGAAAAA  738

seq1  ACAAACCTTCATTGGGAAAATAACCTTCCTACAATTATGATAAAAGCAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCTTCATTGGGAAAATAACCTTCCTACAATTATGATAAAAGCAGA  788

seq1  CCTGTCAATGAGCCAGCGCTTAATACAGAAGGATTATTTTGAAATAAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAATGAGCCAGCGCTTAATACAGAAGGATTATTTTGAAATAAACT  838

seq1  TCTTCAGAGCTCATTAGAATTGGAAAGAACTGTGGAAAGACATCCCTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAGCTCATTAGAATTGGAAAGAACTGTGGAAAGACATCCCTTTA  888

seq1  CCCAGATCCTGAGGTATGTGAAGGAGCTTAGCTGAAACAAATGCAGGTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATCCTGAGGTATGTGAAGGAGCTTAGCTGAAACAAATGCAGGTTT  938

seq1  ACAGCTCAAGTCTCTGTTGACTTTTCGAAAATTGCATTCATTTGTAACCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCAAGTCTCTGTTGACTTTTCGAAAATTGCATTCATTTGTAACCC  988

seq1  AGAGAACATAATGTGAGCCTGGGTAGTTAAGCCTCTGGGGCATGGGGGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACATAATGTGAGCCTGGGTAGTTAAGCCTCTGGGGCATGGGGGGG  1038

seq1  GGGATAGGAAAATAGTAAAAATTATTCCTGTAGGAAGTCCTGGTGAATCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGAAAATAGTAAAAATTATTCCTGTAGGAAGTCCTGGTGAATCT  1088

seq1  TATCATTCATAACATTTTGTATCTATGAAGATGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||
seq2  TATCATTCATAACATTTTGTATCTATGAAGATGAATTC  1126