BAC Information

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BAC

Clone NameB6Ng01-159K08
Chromosome11 (Build37)
Map Location 104,666,076 - 104,793,038
singlet/doubletdoublet
Overlap geneLOC666749, LOC632784
Upstream geneWnt3, Nsf, EG667631, Arf2, LOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960
Downstream geneLOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159K08.bB6Ng01-159K08.g
ACCDH953251DH953252
length1,2251,063
definitionDH953251|Mus musculus domesticus DNA, BAC clone: B6Ng01-159K08, 5' end.DH953252|Mus musculus domesticus DNA, BAC clone: B6Ng01-159K08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,791,810 - 104,793,038)(104,666,076 - 104,667,146)
sequence
gaattcatgtcagggcacatgaacaatctgttttttaaaattgtttctga
gatggtctttcaacttagtattatgaaatgaggatagctttgccacagag
aaatataaaagcctttttaaaaaaatcacattaatatttgagatgcttac
catcaaatggcagactttccatcagtttggacagttcttgatctttgtac
tctagtcccatgttttccagaacatttttcacctcatcgataccaatttt
ttctccttaataataaagattaaaatagtgacacacatggaattttgcac
aatcacagataattaaactatacaatataagggcagggtgggaccatcca
tggccactgagtatctagaaagaacatccttcaaagaaacacgatttgtt
tgtagacgtcatcaagagaagagagcttactctcaatgttggttgtgaga
acacaccagtaggatacactgagaacctaagttggccccagctactatgt
ttgaaatccatccccatatttgcttcctgagatcaatgacggagagcaac
gaagatacaaaggaaatccatttctgtaagtggtggctgactttgctgga
gaattgctgcaaaccctgccagtccttctaaagactggatggcttttggt
ctaagaactttcccatccaaatactaagcagggctgaccctgcttagctt
ctgacaccaagtaacatcggctgggtaagttcaagtcggtatggtcatag
agcaatctaagaattccgatagaatgcttctatccaaacttcccctcttc
tcacagtgctccacttggaatcagacttcacagcttgcgcttgcagcctt
tcccagatgtctctccttacaagaacatttttcttcaaatgcctttttca
tattcaatctcatcttggtgtgtgattcttaaagaatgtgcactaccaat
ggcacccagaatggcaacgatgagcaggtattgagtgtttcttcattcaa
ctagaaggtgcaaatggctaatcctaaacctatgaatgtggtactagagt
tcttttttttttttaagattcattttcattttatttgttgaatttggtcc
atttaatattaaggaaaaataggtggaatttttaaaaaaacactaagctg
ggtagtgggtgtggtatcttctaatcagcacctggagccgagacgaggtc
atatctcgtgagttcaaggcgcctg
gaattcattaaaattgtcttttattgctagaactggcaggtataagtaac
acctcagaatctcccggctgggagtgacttagtttaggaaaagaaaacag
ataaagaaaagatacgaacattggtgaatggaaatagaaggaaggagaag
gcctaaaagaaatacagcaaggagagctggagatgaggaagagggtagga
aatgccatccaacagttcttagactagaaatagggacagactgaaggctc
atgggtaggatctggtccttactcttccactgcagtgtcccgattctaag
tcagatctttgttttatatatttaaagtacactagtgggtttgcaattgg
tttttaaaatgatttttttttattatagctgatggaaaggtagatctagg
tatacttctagatcaagtcaagcttcttaaaaaagagggtaagtaaaaaa
ttatcactaaaataagaaatcttaatctatactaatgcactgtttaatat
atgtgacatacagtagtttgggtctttgcaatctgaaaatcagtacttat
aacagttttgactaggaaccaagactttgttaacaatatagaccactttc
caggtagcctagatgacaaaatagctattgatttagctagcattttaatg
ttgggttgtttgctttcagtttgataatttattcaggcagtcttcaatga
gtcttaaagttctaggtccctctctaggtataagagatttaatgtggaat
aagataatgtccttgtattcatggaacttacattttcttgataactgggg
cagaaattacagaaaacaatgaaaacaaaatgctattatagaaaaaggtg
gtctagccagcagccacagagggctggtttaccttagagttgctagttac
agaatggcagcctggtagacagagcaatgcctgagttgaagtctacagtc
accttcctttaaactttggccaagtagacattcatctacatagtgaatca
ataaagtttgcttccgattctggtaccaatatcgttttacttggaatgga
ttttgaactagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_104791810_104793038
seq2: B6Ng01-159K08.b_48_1272 (reverse)

seq1  CAGGCTGGCCTTGAACTCACAGGGATCTGACTGCCTCT-GGCTCCTGAGT  49
      |||||  ||||||||||||| | ||| ||||  | ||| |||||| | ||
seq2  CAGGC--GCCTTGAACTCAC-GAGATATGACCTCGTCTCGGCTCCAG-GT  46

seq1  GCTGGGGTTGAAGGTGTGCACCACCAC-ATCCAGCTTTAGTGTGTTTTCT  98
      ||| |  | |||| |   |||  |||| | ||||| ||||||| |||| |
seq2  GCT-GATTAGAAGAT-ACCACACCCACTACCCAGC-TTAGTGT-TTTTTT  92

seq1  AATAATT-CACCTTATTTTCCTTAATAT--AATAGAGCCAAATTCAAC-A  144
      || |||| |||||  |||||||||||||  ||| || ||||||||||| |
seq2  AAAAATTCCACCTATTTTTCCTTAATATTAAATGGA-CCAAATTCAACAA  141

seq1  ATAAAATG-AAATGAATCTTTAAAAAAAAAAAAGGACTCTAGTA-CACAT  192
      |||||||| ||||||||| ||||||||||||||| ||||||||| |||||
seq2  ATAAAATGAAAATGAATC-TTAAAAAAAAAAAAGAACTCTAGTACCACAT  190

seq1  TCATAGGTTTAGGATAAGCCATTTGCAACCTTCTAGTTGAATGAAGAAAC  242
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  TCATAGGTTTAGGATTAGCCATTTGC-ACCTTCTAGTTGAATGAAGAAAC  239

seq1  ACTCAATACCTGCTCATCGTTGCCATTCTGGGTGCCATTGGTAGTGCACA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATACCTGCTCATCGTTGCCATTCTGGGTGCCATTGGTAGTGCACA  289

seq1  TTCTTTAAGAATCACACACCAAGATGAGATTGAATATGAAAAAGGCATTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCTTTAAGAATCACACACCAAGATGAGATTGAATATGAAAAAGGCA-TT  338

seq1  TGAAGAAAAATGTTCTTGTAAGGAGAGACATCTGGGAAAGGCTGCAAGCG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAATGTTCTTGTAAGGAGAGACATCTGGGAAAGGCTGCAAGCG  388

seq1  CAAGCTGTGAAGTCTGATTCCAAGTGGAGCACTGTGAGAAGAGGGGAAGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTGAAGTCTGATTCCAAGTGGAGCACTGTGAGAAGAGGGGAAGT  438

seq1  TTGGATAGAAGCATTCTATCGGAATTCTTAGATTGCTCTATGACCATACC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAGAAGCATTCTATCGGAATTCTTAGATTGCTCTATGACCATACC  488

seq1  GACTTGAACTTACCCAGCCGATGTTACTTGGTGTCAGAAGCTAAGCAGGG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAACTTACCCAGCCGATGTTACTTGGTGTCAGAAGCTAAGCAGGG  538

seq1  TCAGCCCTGCTTAGTATTTGGATGGGAAAGTTCTTAGACCAAAAGCCATC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCTGCTTAGTATTTGGATGGGAAAGTTCTTAGACCAAAAGCCATC  588

seq1  CAGTCTTTAGAAGGACTGGCAGGGTTTGCAGCAATTCTCCAGCAAAGTCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTAGAAGGACTGGCAGGGTTTGCAGCAATTCTCCAGCAAAGTCA  638

seq1  GCCACCACTTACAGAAATGGATTTCCTTTGTATCTTCGTTGCTCTCCGTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACTTACAGAAATGGATTTCCTTTGTATCTTCGTTGCTCTCCGTC  688

seq1  ATTGATCTCAGGAAGCAAATATGGGGATGGATTTCAAACATAGTAGCTGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTCAGGAAGCAAATATGGGGATGGATTTCAAACATAGTAGCTGG  738

seq1  GGCCAACTTAGGTTCTCAGTGTATCCTACTGGTGTGTTCTCACAACCAAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTTAGGTTCTCAGTGTATCCTACTGGTGTGTTCTCACAACCAAC  788

seq1  ATTGAGAGTAAGCTCTCTTCTCTTGATGACGTCTACAAACAAATCGTGTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGTAAGCTCTCTTCTCTTGATGACGTCTACAAACAAATCGTGTT  838

seq1  TCTTTGAAGGATGTTCTTTCTAGATACTCAGTGGCCATGGATGGTCCCAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAAGGATGTTCTTTCTAGATACTCAGTGGCCATGGATGGTCCCAC  888

seq1  CCTGCCCTTATATTGTATAGTTTAATTATCTGTGATTGTGCAAAATTCCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCTTATATTGTATAGTTTAATTATCTGTGATTGTGCAAAATTCCA  938

seq1  TGTGTGTCACTATTTTAATCTTTATTATTAAGGAGAAAAAATTGGTATCG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCACTATTTTAATCTTTATTATTAAGGAGAAAAAATTGGTATCG  988

seq1  ATGAGGTGAAAAATGTTCTGGAAAACATGGGACTAGAGTACAAAGATCAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTGAAAAATGTTCTGGAAAACATGGGACTAGAGTACAAAGATCAA  1038

seq1  GAACTGTCCAAACTGATGGAAAGTCTGCCATTTGATGGTAAGCATCTCAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTCCAAACTGATGGAAAGTCTGCCATTTGATGGTAAGCATCTCAA  1088

seq1  ATATTAATGTGATTTTTTTAAAAAGGCTTTTATATTTCTCTGTGGCAAAG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATGTGATTTTTTTAAAAAGGCTTTTATATTTCTCTGTGGCAAAG  1138

seq1  CTATCCTCATTTCATAATACTAAGTTGAAAGACCATCTCAGAAACAATTT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTCATTTCATAATACTAAGTTGAAAGACCATCTCAGAAACAATTT  1188

seq1  TAAAAAACAGATTGTTCATGTGCCCTGACATGAATTC  1229
      |||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACAGATTGTTCATGTGCCCTGACATGAATTC  1225

seq1: chr11_104666076_104667146
seq2: B6Ng01-159K08.g_71_1133

seq1  GAATTCATTAAAATTGTCTTTTATTGCTAGAACTGGCAGGTATAAGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAATTGTCTTTTATTGCTAGAACTGGCAGGTATAAGTAAC  50

seq1  ACCTCAGAATCTCCCGGCTGGGAGTGACTTAGTTTAGGAAAAGAAAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAATCTCCCGGCTGGGAGTGACTTAGTTTAGGAAAAGAAAACAG  100

seq1  ATAAAGAAAAGATACGAACATTGGTGAATGGAAATAGAAGGAAGGAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAAAGATACGAACATTGGTGAATGGAAATAGAAGGAAGGAGAAG  150

seq1  GCCTAAAAGAAATACAGCAAGGAGAGCTGGAGATGAGGAAGAGGGTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAAAGAAATACAGCAAGGAGAGCTGGAGATGAGGAAGAGGGTAGGA  200

seq1  AATGCCATCCAACAGTTCTTAGACTAGAAATAGGGACAGACTGAAGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATCCAACAGTTCTTAGACTAGAAATAGGGACAGACTGAAGGCTC  250

seq1  ATGGGTAGGATCTGGTCCTTACTCTTCCACTGCAGTGTCCCGATTCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAGGATCTGGTCCTTACTCTTCCACTGCAGTGTCCCGATTCTAAG  300

seq1  TCAGATCTTTGTTTTATATATTTAAAGTACACTAGTGGGTTTGCAATTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTTTGTTTTATATATTTAAAGTACACTAGTGGGTTTGCAATTGG  350

seq1  TTTTTAAAATGATTTTTTTTTATTATAGCTGATGGAAAGGTAGATCTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAATGATTTTTTTTTATTATAGCTGATGGAAAGGTAGATCTAGG  400

seq1  TATACTTCTAGATCAAGTCAAGCTTCTTAAAAAAGAGGGTAAGTAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCTAGATCAAGTCAAGCTTCTTAAAAAAGAGGGTAAGTAAAAAA  450

seq1  TTATCACTAAAATAAGAAATCTTAATCTATACTAATGCACTGTTTAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACTAAAATAAGAAATCTTAATCTATACTAATGCACTGTTTAATAT  500

seq1  ATGTGACATACAGTAGTTTGGGTCTTTGCAATCTGAAAATCAGTACTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACATACAGTAGTTTGGGTCTTTGCAATCTGAAAATCAGTACTTAT  550

seq1  AACAGTTTTGACTAGGAACCAAGACTTTGTTAACAATATAGACCACTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTGACTAGGAACCAAGACTTTGTTAACAATATAGACCACTTTC  600

seq1  CAGGTAGCCTAGATGACAAAATAGCTATTGATTTAGCTAGCATTTTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGCCTAGATGACAAAATAGCTATTGATTTAGCTAGCATTTTAATG  650

seq1  TTGGGTTGTTTGCTTTCAGTTTGATAATTTATTCAGGCAGTCTTCAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGTTTGCTTTCAGTTTGATAATTTATTCAGGCAGTCTTCAATGA  700

seq1  GTCTTAAAGTTCTAGGTCCCTCTCTAGGTATAAGAGATTTAATGTGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAAGTTCTAGGTCCCTCTCTAGGTATAAGAGATTTAATGTGGAAT  750

seq1  AAGATAATGTCCTTGTATTCATGGAACTTACATTTTCTTGATAACTGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATGTCCTTGTATTCATGGAACTTACATTTTCTTGATAACTGGGG  800

seq1  CAGAAATTACAGAAAACAATGAAAACAAAATGCTATTATAGAAAAAGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTACAGAAAACAATGAAAACAAAATGCTATTATAGAAAAAGGTG  850

seq1  GTCTAGCCAGCAGCCACAGAGGGCTGGTTTACCTTAGAGTTGCTAGTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCCAGCAGCCACAGAGGGCTGGTTTACCTTAGAGTTGCTAGTTAC  900

seq1  AGAATGGCAGCCTGGTAGACAGAGCAATGCCTGAGTTGAAGTCTACAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCAGCCTGGTAGACAGAGCAATGCCTGAGTTGAAGTCTACAGTC  950

seq1  ACCTTCCTTTTAAAACTTTGGCCAAGTAGACATTTCATCTACATAAGTTG  1000
      ||||||||||  |||||||||||||||||||| ||||||||||||   ||
seq2  ACCTTCCTTT--AAACTTTGGCCAAGTAGACA-TTCATCTACATA--GTG  995

seq1  AATCAAATAAAGTTTGCTTCCGATTCTGGTACCAAATATCGTTTTTACTT  1050
      |||| |||||||||||||||||||||||||||| ||||||| ||||||||
seq2  AATC-AATAAAGTTTGCTTCCGATTCTGGTACC-AATATCG-TTTTACTT  1042

seq1  GG-ATAGATTTTGAACATAGTA  1071
      || || |||||||||| |||||
seq2  GGAATGGATTTTGAAC-TAGTA  1063