MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-161A05
Chromosome	11 (Build37)
Map Location	3,296,891 - 3,298,025
singlet/doublet	singlet
Overlap gene	Limk2
Upstream gene	LOC236604, Sfi1, LOC623257, Eif4enif1, Drg1, Patz1, Pik3ip1
Downstream gene	Rnf185, 8430429K09Rik, LOC100041573, Pla2g3, Pib5pa, Selm, Smtn, Map1lc3-5, LOC625608, Tug1, Morc2a, LOC664900, Osbp2, LOC664920, 4921536K21Rik, Dusp18, Slc35e4, Tcn2, LOC100041720, Pes1, Gal3st1, Sec14l4, Sec14l3, 1700020C11Rik, Sec14l2, LOC625729, Rnf215, 4930562D19Rik, Sf3a1, Tbc1d10a, 2410008K03Rik, LOC625760, Osm, Lif, Hormad2
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-161A05.b	B6Ng01-161A05.g
ACC	DH954242	DH954243
length	1,125	1,237
definition	DH954242\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161A05, 5' end.	DH954243\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161A05, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagaactgggaaaacaggagaaaggcaaaagaggattccttgaag aagcaacttccaagctgagctctgaggagacatttctatgaacacagggc aggaattcagggtgtctcatctctcctcgtaaagagaaccttttttcctt ggggattgtggggaagagaaagaaagggacattagagacaggagacacaa aaattcacacatgattaaatcatagtcatgttgagtactgttgactttaa aggcctggagaatcaagcaagcctaggtcttggatgaaacagtccttcac taagcatgtatgtaaagagtgaagggggcaagggggtatagttcagctga cagaatgcttgccaagtacctcaaagccccccacttaacactggacacac gtgcctcttgtgcatgtgcgcgcgcacgcacgcacgcacacaaacacaca cacacacacacacacacacacacgtgctcttggaatgttatggcctgtaa ccttgactggagccaacagggtcagaagttcaggtcattcttaactacac agagacttgggacccaacttggaatactgagttcaagtccctccaaaacc gaggaggctttcaccaggtgaccccaaagaacctggaggccccactgctc tttacaaggagattgctagtgatgagacactctgaattcctgccccatgg tcacagcctgggcacttcactgttcacaccttaagcacacttcttccatc ttttcacttaaacaaatgtctttcttgatgcccccaaaggcatggctggt ttcactttgtctatactcccctggtacaatgtgttaattctccatctgca gtcctgcggctttgagaccctcactcccagctctacacggctgcatcctg gtcctcttccttctggggtccagcacaggtctggcacaggcatattttgg ccgcaattccagcggatgttggcttgtacagcacctacactgtttccagt ggacttcaaggtcagcaggcgactgtactacaacagtctggctcgcagac tactggaagtctctctggtgcatgaatccgacctttgttttcctgttaca gattccaaccctggatggggatggc	gaattccatatccagtgtgcgtccctgtatctttagatgctcttgggtta gttcatcatgtctccaggcttcaacacacaggctgtgttgacatcaattt acatccagtgaaggaaggttttgaagagccttgaatgtcagtggttagag tttgggagaaatctgatagggagccggagctggtcagcatgcagagaggc acatgtgccaccccaccctgtgtggtttagtgcagacaattaaggcttat gcaaatcagatctaatcagatctagctcagaaacttcccatggcttccag cagcctgtgcagcaaactctttttttcttccttccttttttgttttgttt tgttttgtttgacacaggatgtctctgtgtagcactgactgtcctggaac tctgtagaccaggctggcctcgaactcacagagatccagctacctctgct tccagactgtgcctatcacaggcccaacacagaggttagctctctgctcc accgtcttggaattcttaatatctttatttaattatgtttattcatttag tgtgtgttcacataatgcgtggaaaggggtcagaggaaaatttgtaggag ccggttctcttcttctaccagaagaactctgagactcagaactccagcca ttagtcgtggcagcgagtgtgtcagccatcctgctggtccagattcttag taactctgaactatgatcaccgtgttttgtaggcagcactgcctacaggg actcttctgtttagccactgttgctctcagctttctcacccaactccact tctctctcacccttcagactcagagaaaataaagctagtgtctttgggtt ttgattgctgtcatgaaacactaggagcaaaagcatgatgggaaggaaag ggttattcagcttacacttcacagcactgtcaaagactccagacagaaac tcaacagagcagaacttggaggcagaaactgatgctgagtcatgaaggtg ctgctgactgcctggcccccacagcttgtcagcctgctttttttataaga gcccaggacacctagcaaggtattcaccacactcctatgggcctgggccc tcccacgtcagtcactagttatagaataatgcacccatggcttcccacac gacccacacttgtagagcattctataagaggtccggcctcctatacttcc gaccttgggtcatgtgatactaataaacgatcccaat
quality values	Open. 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Alignment Information

BAC End 1	BAC End 2
seq1: chr11_3296891_3298025 seq2: B6Ng01-161A05.b_46_1170 seq1 GAATTCAGAACTGGGAAAACAGGAGAAAGGCAAAAGAGGATTCCTTGAAG 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAATTCAGAACTGGGAAAACAGGAGAAAGGCAAAAGAGGATTCCTTGAAG 50 seq1 AAGCAACTTCCAAGCTGAGCTCTGAGGAGACATTTCTATGAACACAGGGC 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGCAACTTCCAAGCTGAGCTCTGAGGAGACATTTCTATGAACACAGGGC 100 seq1 AGGAATTCAGGGTGTCTCATCTCTCCTCGTAAAGAGAACCTTTTTTCCTT 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGGAATTCAGGGTGTCTCATCTCTCCTCGTAAAGAGAACCTTTTTTCCTT 150 seq1 GGGGATTGTGGGGAAGAGAAAGAAAGGGACATTAGAGACAGGAGACACAA 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GGGGATTGTGGGGAAGAGAAAGAAAGGGACATTAGAGACAGGAGACACAA 200 seq1 AAATTCACACATGATTAAATCATAGTCATGTTGAGTACTGTTGACTTTAA 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAATTCACACATGATTAAATCATAGTCATGTTGAGTACTGTTGACTTTAA 250 seq1 AGGCCTGGAGAATCAAGCAAGCCTAGGTCTTGGATGAAACAGTCCTTCAC 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGGCCTGGAGAATCAAGCAAGCCTAGGTCTTGGATGAAACAGTCCTTCAC 300 seq1 TAAGCATGTATGTAAAGAGTGAAGGGGGCAAGGGGGTATAGTTCAGCTGA 350 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TAAGCATGTATGTAAAGAGTGAAGGGGGCAAGGGGGTATAGTTCAGCTGA 350 seq1 CAGAATGCTTGCCAAGTACCTCAAAGCCCCCCACTTAACACTGGACACAC 400 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CAGAATGCTTGCCAAGTACCTCAAAGCCCCCCACTTAACACTGGACACAC 400 seq1 GTGCCTCTTGTGCATGTGCGCGCGCACGCACGCACGCACACAAACACACA 450 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTGCCTCTTGTGCATGTGCGCGCGCACGCACGCACGCACACAAACACACA 450 seq1 CACACACACACACACACACACACGTGCTCTTGGAATGTTATGGCCTGTAA 500 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CACACACACACACACACACACACGTGCTCTTGGAATGTTATGGCCTGTAA 500 seq1 CCTTGACTGGAGCCAACAGGGTCAGAAGTTCAGGTCATTCTTAACTACAC 550 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCTTGACTGGAGCCAACAGGGTCAGAAGTTCAGGTCATTCTTAACTACAC 550 seq1 AGAGACTTGGGACCCAACTTGGAATACTGAGTTCAAGTCCCTCCAAAACC 600 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGAGACTTGGGACCCAACTTGGAATACTGAGTTCAAGTCCCTCCAAAACC 600 seq1 GAGGAGGCTTTCACCAGGTGACCCCAAAGAACCTGGAGGCCCCACTGCTC 650 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GAGGAGGCTTTCACCAGGTGACCCCAAAGAACCTGGAGGCCCCACTGCTC 650 seq1 TTTACAAGGAGATTGCTAGTGATGAGACACTCTGAATTCCTGCCCCATGG 700 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTTACAAGGAGATTGCTAGTGATGAGACACTCTGAATTCCTGCCCCATGG 700 seq1 TCACAGCCT-GGCACTTCACTGTTCACACCTTAAGCACACTTCTTCCATC 749 \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCACAGCCTGGGCACTTCACTGTTCACACCTTAAGCACACTTCTTCCATC 750 seq1 TTTTCACTTAAACAAATGTCTTTCTTGATGCCCCCAAAGGCATGGCTGGT 799 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTTTCACTTAAACAAATGTCTTTCTTGATGCCCCCAAAGGCATGGCTGGT 800 seq1 TTCACTTTGTCTATACTCCCCTGGTACAATGTGTTAATTCTCCATCTGCA 849 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTCACTTTGTCTATACTCCCCTGGTACAATGTGTTAATTCTCCATCTGCA 850 seq1 GTCCTGCGGCTTTGAGACCCTCACTCCCAGCTCTACACGGCTGCATCCTG 899 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTCCTGCGGCTTTGAGACCCTCACTCCCAGCTCTACACGGCTGCATCCTG 900 seq1 GTCCTCTTCCTTCTGGGGTCCAGCACAGGTCTGGCACAGGCAATATTTTG 949 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\| seq2 GTCCTCTTCCTTCTGGGGTCCAGCACAGGTCTGGCACAGGC-ATATTTTG 949 seq1 GCCGCAAATCCAGCGGGAAGGTTGGCTGTAACAGGCACCTACACTGTTTC 999 \|\|\|\|\|\|\| \|\|\|\|\|\|\|\| \| \|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GCCGCAATTCCAGCGG--ATGTTGGCTTGTACA-GCACCTACACTGTTTC 996 seq1 CAAGTGGAACTTCAAAGGTCAGCAGGGCGACTGTACTACAACAGTCTGGC 1049 \| \|\|\|\|\| \|\|\|\|\| \|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 C-AGTGG-ACTTC-AAGGTCAGCA-GGCGACTGTACTACAACAGTCTGGC 1042 seq1 TCGCAGGACTACTGAGAAGTCTC-CT-GTGCATGAACCCGACCTCTGTTT 1097 \|\|\|\|\| \|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\| \|\| \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| \|\|\|\|\| seq2 TCGCA-GACTACTG-GAAGTCTCTCTGGTGCATGAATCCGACCTTTGTTT 1090 seq1 CTCTGTTACAGATTCACACCACGGGTGATGGGGATGGC 1135 \|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\| \| \|\|\|\|\|\|\|\|\|\|\|\| seq2 TCCTGTTACAGATTCCAACCCTG---GATGGGGATGGC 1125

BAC End 1

BAC End 2

seq1: chr11_3296891_3298025
seq2: B6Ng01-161A05.b_46_1170

seq1  GAATTCAGAACTGGGAAAACAGGAGAAAGGCAAAAGAGGATTCCTTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTGGGAAAACAGGAGAAAGGCAAAAGAGGATTCCTTGAAG  50

seq1  AAGCAACTTCCAAGCTGAGCTCTGAGGAGACATTTCTATGAACACAGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTTCCAAGCTGAGCTCTGAGGAGACATTTCTATGAACACAGGGC  100

seq1  AGGAATTCAGGGTGTCTCATCTCTCCTCGTAAAGAGAACCTTTTTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCAGGGTGTCTCATCTCTCCTCGTAAAGAGAACCTTTTTTCCTT  150

seq1  GGGGATTGTGGGGAAGAGAAAGAAAGGGACATTAGAGACAGGAGACACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTGTGGGGAAGAGAAAGAAAGGGACATTAGAGACAGGAGACACAA  200

seq1  AAATTCACACATGATTAAATCATAGTCATGTTGAGTACTGTTGACTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACACATGATTAAATCATAGTCATGTTGAGTACTGTTGACTTTAA  250

seq1  AGGCCTGGAGAATCAAGCAAGCCTAGGTCTTGGATGAAACAGTCCTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGAGAATCAAGCAAGCCTAGGTCTTGGATGAAACAGTCCTTCAC  300

seq1  TAAGCATGTATGTAAAGAGTGAAGGGGGCAAGGGGGTATAGTTCAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGTATGTAAAGAGTGAAGGGGGCAAGGGGGTATAGTTCAGCTGA  350

seq1  CAGAATGCTTGCCAAGTACCTCAAAGCCCCCCACTTAACACTGGACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCTTGCCAAGTACCTCAAAGCCCCCCACTTAACACTGGACACAC  400

seq1  GTGCCTCTTGTGCATGTGCGCGCGCACGCACGCACGCACACAAACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTTGTGCATGTGCGCGCGCACGCACGCACGCACACAAACACACA  450

seq1  CACACACACACACACACACACACGTGCTCTTGGAATGTTATGGCCTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACGTGCTCTTGGAATGTTATGGCCTGTAA  500

seq1  CCTTGACTGGAGCCAACAGGGTCAGAAGTTCAGGTCATTCTTAACTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACTGGAGCCAACAGGGTCAGAAGTTCAGGTCATTCTTAACTACAC  550

seq1  AGAGACTTGGGACCCAACTTGGAATACTGAGTTCAAGTCCCTCCAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTGGGACCCAACTTGGAATACTGAGTTCAAGTCCCTCCAAAACC  600

seq1  GAGGAGGCTTTCACCAGGTGACCCCAAAGAACCTGGAGGCCCCACTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGCTTTCACCAGGTGACCCCAAAGAACCTGGAGGCCCCACTGCTC  650

seq1  TTTACAAGGAGATTGCTAGTGATGAGACACTCTGAATTCCTGCCCCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAGGAGATTGCTAGTGATGAGACACTCTGAATTCCTGCCCCATGG  700

seq1  TCACAGCCT-GGCACTTCACTGTTCACACCTTAAGCACACTTCTTCCATC  749
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTGGGCACTTCACTGTTCACACCTTAAGCACACTTCTTCCATC  750

seq1  TTTTCACTTAAACAAATGTCTTTCTTGATGCCCCCAAAGGCATGGCTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTTAAACAAATGTCTTTCTTGATGCCCCCAAAGGCATGGCTGGT  800

seq1  TTCACTTTGTCTATACTCCCCTGGTACAATGTGTTAATTCTCCATCTGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTGTCTATACTCCCCTGGTACAATGTGTTAATTCTCCATCTGCA  850

seq1  GTCCTGCGGCTTTGAGACCCTCACTCCCAGCTCTACACGGCTGCATCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCGGCTTTGAGACCCTCACTCCCAGCTCTACACGGCTGCATCCTG  900

seq1  GTCCTCTTCCTTCTGGGGTCCAGCACAGGTCTGGCACAGGCAATATTTTG  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTCCTCTTCCTTCTGGGGTCCAGCACAGGTCTGGCACAGGC-ATATTTTG  949

seq1  GCCGCAAATCCAGCGGGAAGGTTGGCTGTAACAGGCACCTACACTGTTTC  999
      ||||||| ||||||||  | |||||||   ||| ||||||||||||||||
seq2  GCCGCAATTCCAGCGG--ATGTTGGCTTGTACA-GCACCTACACTGTTTC  996

seq1  CAAGTGGAACTTCAAAGGTCAGCAGGGCGACTGTACTACAACAGTCTGGC  1049
      | ||||| ||||| |||||||||| |||||||||||||||||||||||||
seq2  C-AGTGG-ACTTC-AAGGTCAGCA-GGCGACTGTACTACAACAGTCTGGC  1042

seq1  TCGCAGGACTACTGAGAAGTCTC-CT-GTGCATGAACCCGACCTCTGTTT  1097
      ||||| |||||||| |||||||| || ||||||||| ||||||| |||||
seq2  TCGCA-GACTACTG-GAAGTCTCTCTGGTGCATGAATCCGACCTTTGTTT  1090

seq1  CTCTGTTACAGATTCACACCACGGGTGATGGGGATGGC  1135
        |||||||||||||  |||  |   ||||||||||||
seq2  TCCTGTTACAGATTCCAACCCTG---GATGGGGATGGC  1125

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information