BAC Information

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BAC

Clone NameB6Ng01-175D02
Chromosome11 (Build37)
Map Location 64,542,832 - 64,543,828
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
Downstream geneLOC626959, Elac2, AU040829, 1700086D15Rik, LOC100041790, Myocd, Map2k4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175D02.bB6Ng01-175D02.g
ACCGA003067GA003068
length9981,149
definitionB6Ng01-175D02.b B6Ng01-175D02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatccctttcagggccagcaatccttcctcctattcttccata
agagtccccaagctccatccactgattggctgtgggtgtctgtatccgtc
tgagttagctgctgggtggagcctctcagatgacaacatgctcctcacac
attgtaatttttaatttgcccagcatggcttcctgttgtacacagcctgg
ttaagggaggcacgggaatcactgaacactgtgaggaaagtcaaagtcta
cacatcagctcactcgtgaggtccatctctttactgttagtattaatatt
ctgtagcctgatacttctgtgtttctgtcccaattattatttccgagcca
gaattggggaccaaagtctggggacacaattattctgatttctaagtatt
tagtttggtcctgaatgtttatgcttgagaccttcagcatccctcagttc
ccgtgcagtcctccacagccccctttccctcacctataactgatagcaat
tgatgagtctctcgttctctaaagtggcccattctgtagaccacatccac
atgtccatccttaaagggcaatagctagagatgccttgatggacctggaa
tcttctaggcagccaagatttttgctttttacataaggagaaggcctgct
tctcagaagtcccaaccccctccagccctgaggattctgaagtcattttc
tagagactggacggtgtgagacccacttgaaagaataggaaatttgctgg
tatattttaataatagaattctacagtgattattcttatgtgataaaata
tgtgagtgtttgttgtaacataattttccccaaatccaaagatctgggga
aacctttgagggtgtacaatgtttagcttgtggttggaatgatatgataa
aggcttcaaatgtatttaagagggaggcaggcaagggtaggggtatgaga
caatcagagagacaatcgaagtaaaggggagagaggaggagaggagtg
gaattctttgtttagctctgtaccccatttttaaatagagttatttggtt
ctttggagtctaacttcttgagttcttttatatattggatattatccctc
tataagatgtagggttggtcaagatcttttcccaatctgttagttgctgt
tttgtcctattgacagtatcctttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattcttgatcttagagcataagcaattggtattc
tgtttaggaaaatttccctgtgcccatgtgctcgaggctcttccccagtt
tctttcctatttgtttcagtgtatctggttttatgtagaggtccttgatc
cacttggacttgagctttgtacaaggagataagaatggattgatttgaat
tcttctacatactaacctccagctgagccagcaccatttgttgaaaatgc
tgtcttttttttcccactggatggttttagctcctttgtcaaagatcaaa
tgaccataggtgtgtgggttcaattctttgtcttcaattctattccattg
ctctaccttcttgtcactgttccaatacaatgcttttttttttttatcac
gattgctctgtagtataacttgaaatcgaagaagatctcagaagatggaa
atatcttccatgctcatggatatttgtttatttttaaaagacttattttt
gtttttacaagtatgtgtatgtgtgtggatatatgtatgtgaatgccaat
acatatggaaaccaaaagagggtgttagatacactggagctgtctcactt
atgattgtgaactatcctatataggtgctgagaactaaacctggcttttg
caatgtgcaacaagtgttcttactgctgagtcctctctccaggcccaaag
gttattttattataaaaattatttctttaatcctcacagaatctctcaga
taaatcttgtgtgaatttgatagatgtgtctttcagaaatgccaatttca
tgtaggtatcaaattgtggtgccagagctatccattgtatttgctttctt
ctcgtttacatccatggaacctgtagtaatctttaccttttgttattgaa
ttcgatattccggtacttcaactagttgagtaagctttgaagtgtttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64542832_64543828
seq2: B6Ng01-175D02.b_45_1042

seq1  GAATTCCTATCCCTTTCAGGGCCAGCAATCCTTCCTCCTATTCTTCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCCCTTTCAGGGCCAGCAATCCTTCCTCCTATTCTTCCATA  50

seq1  AGAGTCCCCAAGCTCCATCCACTGATTGGCTGTGGGTGTCTGTATCCGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCCAAGCTCCATCCACTGATTGGCTGTGGGTGTCTGTATCCGTC  100

seq1  TGAGTTAGCTGCTGGGTGGAGCCTCTCAGATGACAACATGCTCCTCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAGCTGCTGGGTGGAGCCTCTCAGATGACAACATGCTCCTCACAC  150

seq1  ATTGTAATTTTTAATTTGCCCAGCATGGCTTCCTGTTGTACACAGCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATTTTTAATTTGCCCAGCATGGCTTCCTGTTGTACACAGCCTGG  200

seq1  TTAAGGGAGGCACGGGAATCACTGAACACTGTGAGGAAAGTCAAAGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGAGGCACGGGAATCACTGAACACTGTGAGGAAAGTCAAAGTCTA  250

seq1  CACATCAGCTCACTCGTGAGGTCCATCTCTTTACTGTTAGTATTAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAGCTCACTCGTGAGGTCCATCTCTTTACTGTTAGTATTAATATT  300

seq1  CTGTAGCCTGATACTTCTGTGTTTCTGTCCCAATTATTATTTCCGAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCCTGATACTTCTGTGTTTCTGTCCCAATTATTATTTCCGAGCCA  350

seq1  GAATTGGGGACCAAAGTCTGGGGACACAATTATTCTGATTTCTAAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGGGACCAAAGTCTGGGGACACAATTATTCTGATTTCTAAGTATT  400

seq1  TAGTTTGGTCCTGAATGTTTATGCTTGAGACCTTCAGCATCCCTCAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGGTCCTGAATGTTTATGCTTGAGACCTTCAGCATCCCTCAGTTC  450

seq1  CCGTGCAGTCCTCCACAGCCCCCTTTCCCTCACCTATAACTGATAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCAGTCCTCCACAGCCCCCTTTCCCTCACCTATAACTGATAGCAAT  500

seq1  TGATGAGTCTCTCGTTCTCTAAAGTGGCCCATTCTGTAGACCACATCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGTCTCTCGTTCTCTAAAGTGGCCCATTCTGTAGACCACATCCAC  550

seq1  ATGTCCATCCTTAAAGGGCAATAGCTAGAGATGCCTTGATGGACCTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATCCTTAAAGGGCAATAGCTAGAGATGCCTTGATGGACCTGGAA  600

seq1  TCTTCTAGGCAGCCAAGATTTTTGCTTTTTACATAAGGAGAAGGCCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGGCAGCCAAGATTTTTGCTTTTTACATAAGGAGAAGGCCTGCT  650

seq1  TCTCAGAAGTCCCAACCCCCTCCAGCCCTGAGGATTCTGAAGTCATTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAGTCCCAACCCCCTCCAGCCCTGAGGATTCTGAAGTCATTTTC  700

seq1  TAGAGACTGGACGGTGTGAGACCCACTTGAAAGAATAGGAAATTTGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACTGGACGGTGTGAGACCCACTTGAAAGAATAGGAAATTTGCTGG  750

seq1  TATATTTTAATAATAGAATTCTACAGTGATTATTCTTATGTGATAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAATAATAGAATTCTACAGTGATTATTCTTATGTGATAAAATA  800

seq1  TGTGAGTGTTTGTTGTAACATAATTTTCCCCAAATCCAAAGATCTGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGTTTGTTGTAACATAATTTTCCCCAAATCCAAAGATCTGGGGA  850

seq1  AACCTTTGAGGGTGTACAATGTTTAGCTTGTGGTTGGAATGATATGAT-A  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACCTTTGAGGGTGTACAATGTTTAGCTTGTGGTTGGAATGATATGATAA  900

seq1  AGGCTTCAAATGTATTTAAGAGGGAGGCAGGCAAGGGTAGGGGTATGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAAATGTATTTAAGAGGGAGGCAGGCAAGGGTAGGGGTATGAGA  950

seq1  CAATCAGAGAGACAATCGAAGTAAGGGGGAGAGAGGAGGAGAGGAGTG  997
      |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAATCAGAGAGACAATCGAAGTAAAGGGGAGAGAGGAGGAGAGGAGTG  998