BAC Information

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BAC

Clone NameB6Ng01-180M13
Chromosome11 (Build37)
Map Location 87,952,650 - 87,953,638
singlet/doubletsinglet
Overlap genenone
Upstream geneTrim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1
Downstream geneCuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2, LOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180M13.bB6Ng01-180M13.g
ACCGA007124GA007125
length983654
definitionB6Ng01-180M13.b B6Ng01-180M13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgtcgagcaaagaatctctttgtgaggagaaaaatctatca
cttgggatttctgttcaggtttctcgcaggagtcagggccgggcaggcag
tttgtttgccccggggcccagtgaggtccaactgaaagggctccccatgt
gctcccagatctgccgatcacctttcatccttccgttgtcttcctgtcgg
gcactggcccgccaacatcgatcacgctggcccggaaggtggtgacgggt
ttgcgtttcttgctccctgttttgttcctttgcttagtcaatcgagtctc
catggaaacaggtgcagcctttgtgttgcttttgctttgggtgaatcaat
gctcccccgccccctctcctctttgggatcaaagggggaggtgaattcat
cacagcaactgtggtggcctggggagccaggcagggattagtcctctagt
caagcatccccacaaccacagcgtggctgctgccgggtccacagtctccc
tttcgcctcctgagaccatcgggatgccgcgactcataaatgccctcgtc
ccagcccccaggttctctattctcaggggcagctgctggccacctggggc
gggatcctgagtagagatcagcttgctcagcttctttggtgtgaccttgg
aggcaaggcctttgacctttctagacctttgaggctaagagattggagaa
gcttagaatgggggagaaagtcaggcttttggtagcaggactgcatttgc
cctaaagaaaaccacatctgggtatgcagttttgtcttctgtcctagggc
caatagtaaatttacgtttggttcaaaccagtgacattcaaaaaaacggc
agcccatctccaaggagcaacttgataaaaatctatcccccaccccccaa
tccctccccactccgatcacagcaactccctatccatctgctggtcaggg
tcttccctgctggtgaacactgtcagagccttc
gaattctatcgtgagcagggtcctctgccccagtctctttcaacttgtca
cagcttctctgcgactcaacaagacagggagacatgagggactttacaga
gacccaggcaatcttacgcccctctgagagtccagttcagtcagaatggg
ttgaggctcttaggtggtctgccttagagcaggggctttcaacctgtgaa
tggctacttctttggggattgaatgaccctttcacagaggtctcctaaga
ccattggaagaaatacatacattgcattcataagtgtcacctctgtcatt
gataaccccattccttgggatagagaaacaccacgccattttcttgcctc
tttgagctacaaccctagaacgaaatcttttctgtaatgatccgccttct
ccttctcctcttttttttttttttttagaggttttgtaagtttcttctga
atcctcttaaaagctgtcaaataaaaccccgttgctccgaagttgataaa
ggttgccccccccgtcctttaactattgggttacccccacgttttttaac
ccaatggtttaacaattttttttgacaactaagagttttgaaaaagtttt
gggtgataataacacaaaaagagctcctgtccccaaggggggggttttta
aatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87952650_87953638
seq2: B6Ng01-180M13.b_44_1026

seq1  GAATTCCTTTGTCGAGCAAAGAATCTCTTTGTGAGGAGAAGAATCTATCA  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAATTCCTTTGTCGAGCAAAGAATCTCTTTGTGAGGAGAAAAATCTATCA  50

seq1  CTTGGGATTTCTGTTCAGGTTTCTCGCAGGAGTCAGGGCCGGGCAGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGATTTCTGTTCAGGTTTCTCGCAGGAGTCAGGGCCGGGCAGGCAG  100

seq1  TTTGTTTGCCCCGGGGCCCAGTGAGGTCCAACTGAAAGGGCTCCCCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGCCCCGGGGCCCAGTGAGGTCCAACTGAAAGGGCTCCCCATGT  150

seq1  GCTCCCAGATCTGCCGATCACCTTTCATCCTTCCGTTGTCTTCCTGTCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGATCTGCCGATCACCTTTCATCCTTCCGTTGTCTTCCTGTCGG  200

seq1  GCACTGGCCCGCCAACATCGATCACGCTGGCCCGGAAGGTGGTGACGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGCCCGCCAACATCGATCACGCTGGCCCGGAAGGTGGTGACGGGT  250

seq1  TTGCGTTTCTTGCTCCCTGTTTTGTTCCTTTGCTTAGTCAATCGAGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGTTTCTTGCTCCCTGTTTTGTTCCTTTGCTTAGTCAATCGAGTCTC  300

seq1  CATGGAAACAGGTGCAGCCTTTGTGTTGCTTTTGCTTTGGGTGAATCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAACAGGTGCAGCCTTTGTGTTGCTTTTGCTTTGGGTGAATCAAT  350

seq1  GCTCCCCCGCCCCCTCTCCTCTTTGGGATCAAAGGGGGAGGTGAATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCCGCCCCCTCTCCTCTTTGGGATCAAAGGGGGAGGTGAATTCAT  400

seq1  CACAGCAACTGTGGTGGCCTGGGGAGCCAGGCAGGGATTAGTCCTCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAACTGTGGTGGCCTGGGGAGCCAGGCAGGGATTAGTCCTCTAGT  450

seq1  CAAGCATCCCCACAACCACAGCGTGGCTGCTGCCGGGTCCACAGTCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATCCCCACAACCACAGCGTGGCTGCTGCCGGGTCCACAGTCTCCC  500

seq1  TTTCGCCTCCTGAGACCATCGGGATGCCGCGACTCATAAATGCCCTCGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGCCTCCTGAGACCATCGGGATGCCGCGACTCATAAATGCCCTCGTC  550

seq1  CCAGCCCCCAGGTTCTCTATTCTCAGGGGCAGCTGCTGGCCACCTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCCCAGGTTCTCTATTCTCAGGGGCAGCTGCTGGCCACCTGGGGC  600

seq1  GGGATCCTGAGTAGAGATCAGCTTGCTCAGCTTCTTTGGTGTGACCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCTGAGTAGAGATCAGCTTGCTCAGCTTCTTTGGTGTGACCTTGG  650

seq1  AGGCAAGGCCTTTGACCTTTCTAGACCTTTGAGGCTAAGAGATTGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGCCTTTGACCTTTCTAGACCTTTGAGGCTAAGAGATTGGAGAA  700

seq1  GCTTAGAATGGGGGAGAAAGTCAGGCTTTTGGTAGCAGGACTGCATTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAATGGGGGAGAAAGTCAGGCTTTTGGTAGCAGGACTGCATTTGC  750

seq1  CCTAAAGAAAACCACATCTGGGTATGCAGTTTTTGTCTTCTGTCCTAGGG  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTAAAGAAAACCACATCTGGGTATGCAG-TTTTGTCTTCTGTCCTAGGG  799

seq1  CCAATAGTAAATTTACGTTTGGTTCAAACCAGTGACATTC-AAAAAACGG  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAATAGTAAATTTACGTTTGGTTCAAACCAGTGACATTCAAAAAAACGG  849

seq1  CAGCCCATCTCCAAGGAGCAACTTGATAAAAATCTATCCCCCACCCCCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGCCCATCTCCAAGGAGCAACTTGATAAAAATCTATCCCCCACCCCCCA  899

seq1  ATCCCTCCCCCACTCCCGATCCACAGCACCTCCCCTTCCCTCTGCTGGTC  949
      |||||| ||||||| ||||| ||||||| |||||  ||| ||||||||| 
seq2  ATCCCT-CCCCACT-CCGAT-CACAGCAACTCCCTATCCATCTGCTGGT-  945

seq1  CAGGGTCTTCCCTGCTGGTGACAACCTGTCAGAGGCCTTC  989
      ||||||||||||||||||||| |  |||||||| ||||||
seq2  CAGGGTCTTCCCTGCTGGTGA-ACACTGTCAGA-GCCTTC  983