BAC Information

Click to search

BAC

Clone NameB6Ng01-191F13
Chromosome11 (Build37)
Map Location 62,945,837 - 63,013,106
singlet/doubletdoublet
Overlap genePmp22
Upstream geneSpecc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3
Downstream geneLOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191F13.bB6Ng01-191F13.g
ACCGA014861GA014862
length1,151413
definitionB6Ng01-191F13.b B6Ng01-191F13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,011,949 - 63,013,106)(62,945,837 - 62,946,255)
sequence
gaattcccagagaatgaccatgaattgttagtaaagtgcttataaaagca
aacctcacaaggttacatactttctgcctttgtccaatcaggggcaagca
tacttattgatgtacttcctgcctatgtacctcccacccacctatttgtg
atcaagcaaatcctgtgtagttagagcaaccaaccttgtttacagaagtg
aaaatacacgacttgttatatcttacatgaacaacagtcccagcatttca
gaaagttatttatccttgggcaagtaggacttacaggtttatctgtccct
ggttaagtgggacttacatgtttacctgcccttgggcaagtgaggcttat
tgattagaggcatttttgtttcatagtgctcttaagcacagtgattcaaa
gcttaaaacataacttatttcctcacaatgtagacatctttcatctctca
atgaatcctcttactgaacattggtcagggggaacctgttttctgtcagg
aaaaaaatctcctacctccctcttcctcatagggaccagagatcctctaa
ccacctcgagactttgggcaagtctcctcaacagttttcctagtactaca
gcctggcaggagaacccatgaacaatggctgatgctggccagagcctgac
acatttgacttccagagtcagaagagccttccgttaacatgcttcctgca
ttcacgctgccttcttcctcggcttctactctctgctcaccccattccac
tttcagattgattatctttctctatcatatcctccccgcctctctcctag
atctaatccctttctaatttgcattgttcatattattcctattgccataa
aaactgccttccctgataagtacgtgctacttccctctgcctattactaa
agatctacatcttattaaaaactccttccatcttgttggctggtgagcaa
ctgacaatttgcttcttgtgggaaattgggctacgtgcagacagcctgtt
tccagtcgaggctagatcttgaacctagggtagtgatattcacttacatg
ggacaagaagagttctcttcatgtcttctgaccctggtcccacaggctcc
acaggagaggcgtggctatcagcactaagatagcacaggtctccacttgc
a
tcagactcaatcagcctctttacgcactgtctccttccctccagtcagca
gcaaccaagggatagggcccctggcgcatctattcgggatggggctttgg
acaggggtccgcaagtgcggcgggctcagcctagctctccttggggccgt
ccagggggtgcctgtggagctggcggggctgaaggctcttcaccccccgg
ggcgcagggaaggcgcggaaccctgcgcgcgggaagctccggagccgggc
aatcctccagcccgcctgctctcccgctcccccagccgccagcatctagg
ccgagccgggggcggggcggctgctctccgctggcaaaaacgggtggaaa
cttggaggcaagtaacggaacgcggggcgcgctggggtctgggaaaccag
cctcgggtggcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63011949_63013106
seq2: B6Ng01-191F13.b_42_1192 (reverse)

seq1  TGCAAGTGGGAGGGCTTGGTGCTATTCCTAAGTGCTGATAGCCACGCCTC  50
      ||||||| ||||  ||  |||||||  || ||||||||||||||||||||
seq2  TGCAAGT-GGAGACCT--GTGCTAT--CTTAGTGCTGATAGCCACGCCTC  45

seq1  TCCTGTGGGGGCTGTGGGGGCCAGGGTTCAGGAGACATG-AGAGAACTCC  99
      |||||||| | |||| ||| |||||| |||| ||||||| ||||||||| 
seq2  TCCTGTGGAGCCTGT-GGGACCAGGG-TCAGAAGACATGAAGAGAACTCT  93

seq1  TTCTGTCCCATGTAAGTGAATTATCACTACCCTAGGTTCAAGATCTAGCC  149
      |  ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTGTCCCATGTAAGTGAA-TATCACTACCCTAGGTTCAAGATCTAGCC  142

seq1  TCGACTGGAAACCAGGCTGTCTGCACGTAGCCCATTGTCCCACAAGAAGC  199
      ||||||||||| |||||||||||||||||||||| | |||||||||||||
seq2  TCGACTGGAAA-CAGGCTGTCTGCACGTAGCCCAATTTCCCACAAGAAGC  191

seq1  AAA-TGTCAGTTGCTCACCAGCCAACAAGATGGAAGGAGTTTTTAATAAG  248
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCAGTTGCTCACCAGCCAACAAGATGGAAGGAGTTTTTAATAAG  241

seq1  ATGTAGATCTTTAGTAATAGGCAGAGGGAAGTAGCACGTACTTATCAGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATCTTTAGTAATAGGCAGAGGGAAGTAGCACGTACTTATCAGGG  291

seq1  AAGGCAGTTTTTATGGCAATAGGAATAATATGAACAATGCAAATTAGAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTTTTTATGGCAATAGGAATAATATGAACAATGCAAATTAGAAA  341

seq1  GGGATTAGATCTAGGAGAGAGGCGGGGAGGATATGATAGAGAAAGATAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAGATCTAGGAGAGAGGCGGGGAGGATATGATAGAGAAAGATAAT  391

seq1  CAATCTGAAAGTGGAATGGGGTGAGCAGAGAGTAGAAGCCGAGGAAGAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGAAAGTGGAATGGGGTGAGCAGAGAGTAGAAGCCGAGGAAGAAG  441

seq1  GCAGCGTGAATGCAGGAAGCATGTTAACGGAAGGCTCTTCTGACTCTGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGTGAATGCAGGAAGCATGTTAACGGAAGGCTCTTCTGACTCTGGA  491

seq1  AGTCAAATGTGTCAGGCTCTGGCCAGCATCAGCCATTGTTCATGGGTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATGTGTCAGGCTCTGGCCAGCATCAGCCATTGTTCATGGGTTCT  541

seq1  CCTGCCAGGCTGTAGTACTAGGAAAACTGTTGAGGAGACTTGCCCAAAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAGGCTGTAGTACTAGGAAAACTGTTGAGGAGACTTGCCCAAAGT  591

seq1  CTCGAGGTGGTTAGAGGATCTCTGGTCCCTATGAGGAAGAGGGAGGTAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGTGGTTAGAGGATCTCTGGTCCCTATGAGGAAGAGGGAGGTAGG  641

seq1  AGATTTTTTTCCTGACAGAAAACAGGTTCCCCCTGACCAATGTTCAGTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTCCTGACAGAAAACAGGTTCCCCCTGACCAATGTTCAGTAA  691

seq1  GAGGATTCATTGAGAGATGAAAGATGTCTACATTGTGAGGAAATAAGTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCATTGAGAGATGAAAGATGTCTACATTGTGAGGAAATAAGTTA  741

seq1  TGTTTTAAGCTTTGAATCACTGTGCTTAAGAGCACTATGAAACAAAAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAGCTTTGAATCACTGTGCTTAAGAGCACTATGAAACAAAAATG  791

seq1  CCTCTAATCAATAAGCCTCACTTGCCCAAGGGCAGGTAAACATGTAAGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAATCAATAAGCCTCACTTGCCCAAGGGCAGGTAAACATGTAAGTC  841

seq1  CCACTTAACCAGGGACAGATAAACCTGTAAGTCCTACTTGCCCAAGGATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAACCAGGGACAGATAAACCTGTAAGTCCTACTTGCCCAAGGATA  891

seq1  AATAACTTTCTGAAATGCTGGGACTGTTGTTCATGTAAGATATAACAAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTTTCTGAAATGCTGGGACTGTTGTTCATGTAAGATATAACAAGT  941

seq1  CGTGTATTTTCACTTCTGTAAACAAGGTTGGTTGCTCTAACTACACAGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATTTTCACTTCTGTAAACAAGGTTGGTTGCTCTAACTACACAGGA  991

seq1  TTTGCTTGATCACAAATAGGTGGGTGGGAGGTACATAGGCAGGAAGTACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGATCACAAATAGGTGGGTGGGAGGTACATAGGCAGGAAGTACA  1041

seq1  TCAATAAGTATGCTTGCCCCTGATTGGACAAAGGCAGAAAGTATGTAACC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAGTATGCTTGCCCCTGATTGGACAAAGGCAGAAAGTATGTAACC  1091

seq1  TTGTGAGGTTTGCTTTTATAAGCACTTTACTAACAATTCATGGTCATTCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGGTTTGCTTTTATAAGCACTTTACTAACAATTCATGGTCATTCT  1141

seq1  CTGGGAATTC  1158
      ||||||||||
seq2  CTGGGAATTC  1151

seq1: chr11_62945837_62946255
seq2: B6Ng01-191F13.g_62_480

seq1  GAATTCTCAGACTCAATCAGCCTCTTTACGCACTGTCTCCTTCCCTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGACTCAATCAGCCTCTTTACGCACTGTCTCCTTCCCTCCAG  50

seq1  TCAGCAGCAACCAAGGGATAGGGCCCCTGGCGCATCTATTCGGGATGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGCAACCAAGGGATAGGGCCCCTGGCGCATCTATTCGGGATGGGG  100

seq1  CTTTGGACAGGGGTCCGCAAGTGCGGCGGGCTCAGCCTAGCTCTCCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGACAGGGGTCCGCAAGTGCGGCGGGCTCAGCCTAGCTCTCCTTGG  150

seq1  GGCCGTCCAGGGGGTGCCTGTGGAGCTGGCGGGGCTGAAGGCTCTTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGTCCAGGGGGTGCCTGTGGAGCTGGCGGGGCTGAAGGCTCTTCACC  200

seq1  CCCCGGGGCGCAGGGAAGGCGCGGAACCCTGCGCGCGGGAAGCTCCGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGGGCGCAGGGAAGGCGCGGAACCCTGCGCGCGGGAAGCTCCGGAG  250

seq1  CCGGGCAATCCTCCAGCCCGCCTGCTCTCCCGCTCCCCCAGCCGCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCAATCCTCCAGCCCGCCTGCTCTCCCGCTCCCCCAGCCGCCAGCA  300

seq1  TCTAGGCCGAGCCGGGGGCGGGGCGGCTGCTCTCCGCTGGCAAAAACGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCCGAGCCGGGGGCGGGGCGGCTGCTCTCCGCTGGCAAAAACGGG  350

seq1  TGGAAACTTGGAGGCAAGTAACGGAACGCGGGGCGCGCTGGGGTCTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTGGAGGCAAGTAACGGAACGCGGGGCGCGCTGGGGTCTGGGA  400

seq1  AACCAGCCTCGGGTGGCGG  419
      |||||||||||||||||||
seq2  AACCAGCCTCGGGTGGCGG  419