MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-192D08
Chromosome	11 (Build37)
Map Location	117,803,565 - 117,956,009
singlet/doublet	doublet
Overlap gene	Socs3, Pgs1, Dnahc17
Upstream gene	Mgat5b, LOC100042036, Sec14l1, Sept9, EG667423, Tnrc6c, Tmc6, Tmc8, 6030468B19Rik, Syngr2, Tk1, Afmid, Birc5, LOC546519, Tha1
Downstream gene	Pscd1, Usp36, Timp2, Ddc8, Lgals3bp, Cant1, C1qtnf1, D230014K01Rik, D11Bwg0517e, Enpp7, Cbx2, Cbx8, Cbx4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mgat5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268510 MGI:3606200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042036 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Sec14l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74136 MGI:1921386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sept9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53860 MGI:1858222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667423 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667423 MGI:3646811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 715 ESTs, 6 Proteins pseudo : _no_value

name	Tnrc6c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217351 MGI:2443265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217353 MGI:1098686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tmc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217356 MGI:2669037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6030468B19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77727 MGI:1924977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein

name	Syngr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20973 MGI:1328324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21877 MGI:98763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Afmid (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71562 MGI:2448704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11799 MGI:1203517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Tha1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71776 MGI:1919026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Socs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12702 MGI:1201791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74451 MGI:1921701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69926 MGI:1917176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 12 Proteins

name	Pscd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19157 MGI:1334257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp36 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72344 MGI:1919594
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 107 ESTs, 3 Proteins

name	Timp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21858 MGI:98753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58251 MGI:1929713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgals3bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19039 MGI:99554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cant1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76025 MGI:1923275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	C1qtnf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56745 MGI:1919254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D230014K01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217364 MGI:2443788
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Bwg0517e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52897 MGI:106368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Enpp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238011 MGI:3027917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12416 MGI:88289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbx8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30951 MGI:1353589
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbx4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12418 MGI:1195985
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgat5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301484 GeneID:268510 MGI:3606200
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannoside acetylglucosaminyltransferase 5, isoenzyme B transcript_id : NM_172948.3

name	LOC100042036 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262519 GeneID:100042036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042036 transcript_id : XM_001477442.1

name	Sec14l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371946 GeneID:74136 MGI:1921386
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC14-like 1 (S. cerevisiae) transcript_id : NM_028777.2

name	Sept9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393783 GeneID:53860 MGI:1858222
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : septin 9 transcript_id : NM_017380.1

name	Tnrc6c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378034 GeneID:217351 MGI:2443265
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trinucleotide repeat containing 6C transcript_id : NM_198022.2

name	Tmc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703875 GeneID:217353 MGI:1098686
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like gene family 6 transcript_id : NM_145439.1

name	Tmc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803122 GeneID:217353 MGI:1098686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like gene family 6 transcript_id : NM_181321.3

name	Tmc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32469502 GeneID:217356 MGI:2669037
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like 8 transcript_id : NM_181856.1

name	6030468B19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390956 GeneID:77727 MGI:1924977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : RIKEN cDNA 6030468B19 gene transcript_id : XM_126537.4

name	Syngr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106428 GeneID:20973 MGI:1328324
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptogyrin 2 transcript_id : NM_009304.1

name	Tk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678356 GeneID:21877 MGI:98763
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymidine kinase 1 transcript_id : NM_009387.1

name	Afmid (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560783 GeneID:71562 MGI:2448704
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylformamidase transcript_id : NM_027827.2

name	Birc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59859889 GeneID:11799 MGI:1203517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 5 transcript_id : NM_001012273.1

name	Birc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59859886 GeneID:11799 MGI:1203517
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 5 transcript_id : NM_009689.2

name	LOC546519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94390957 GeneID:546519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical LOC546519 transcript_id : XM_621267.2

name	Tha1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374714 GeneID:71776 MGI:1919026
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : threonine aldolase 1 transcript_id : NM_027919.2

name	Socs3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982458 GeneID:12702 MGI:1201791
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of cytokine signaling 3 transcript_id : NM_007707.2

name	Pgs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367139 GeneID:74451 MGI:1921701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylglycerophosphate synthase 1 transcript_id : NM_133757.2

name	Dnahc17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262521 GeneID:69926 MGI:1917176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 12 Proteins product : dynein, axonemal, heavy chain 17 transcript_id : XM_126677.7

name	Pscd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543515 GeneID:19157 MGI:1334257
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology, Sec7 and coiled-coil domains 1 transcript_id : NM_011180.2

name	Usp36 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390967 GeneID:72344 MGI:1919594
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 107 ESTs, 3 Proteins product : ubiquitin specific peptidase 36, transcript variant 1 transcript_id : XM_126772.6

name	Timp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61835847 GeneID:21858 MGI:98753
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tissue inhibitor of metalloproteinase 2 transcript_id : NM_011594.3

name	Ddc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946811 GeneID:58251 MGI:1929713
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis specific protein, Ddc8 transcript_id : NM_021440.1

name	Lgals3bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130236 GeneID:19039 MGI:99554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lectin, galactoside-binding, soluble, 3 binding protein transcript_id : NM_011150.2

name	Cant1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043963 GeneID:76025 MGI:1923275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium activated nucleotidase 1 transcript_id : NM_001025618.1

name	Cant1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043971 GeneID:76025 MGI:1923275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium activated nucleotidase 1 transcript_id : NM_001025617.1

name	Cant1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043950 GeneID:76025 MGI:1923275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium activated nucleotidase 1 transcript_id : NM_029502.2

name	C1qtnf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892163 GeneID:56745 MGI:1919254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 1 transcript_id : NM_019959.2

name	D230014K01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369815 GeneID:217364 MGI:2443788
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D230014K01 gene transcript_id : NM_172573.1

name	D11Bwg0517e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85677494 GeneID:52897 MGI:106368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed transcript_id : NM_001039168.1

name	D11Bwg0517e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85677498 GeneID:52897 MGI:106368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed transcript_id : NM_001024931.2

name	D11Bwg0517e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85677496 GeneID:52897 MGI:106368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed transcript_id : NM_001039167.1

name	Enpp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71892413 GeneID:238011 MGI:3027917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleotide pyrophosphatase/phosphodiesterase 7 transcript_id : NM_001030291.1

name	Cbx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542345 GeneID:12416 MGI:88289
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromobox homolog 2 (Drosophila Pc class) transcript_id : NM_007623.2

name	Cbx8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7304946 GeneID:30951 MGI:1353589
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromobox homolog 8 (Drosophila Pc class) transcript_id : NM_013926.1

name	Cbx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680861 GeneID:12418 MGI:1195985
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromobox homolog 4 (Drosophila Pc class) transcript_id : NM_007625.1

name	Mgat5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476097 CCDS:CCDS25682.1 GeneID:268510 MGI:3606200
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : beta1,6-N-acetylglucosaminyltransferase IX (GnT-IX); UDP-N-acetylglucosamine: alpha1,6-D-mannoside beta1,6-N-acetylglucosaminyltransferase b product : beta1,6-N-acetylglucosaminyltransferase IX protein_id : NP_766536.2

name	LOC100042036 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262520 GeneID:100042036
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477492.1

name	Sec14l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311923 CCDS:CCDS25683.1 GeneID:74136 MGI:1921386
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SEC14-like 1 protein_id : NP_083053.1

name	Sept9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393784 CCDS:CCDS25684.1 GeneID:53860 MGI:1858222
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA] codon_start : 1 function : putative proto-oncogene note : MLL septin-like fusion; SL3-3 integration site 1 product : septin 9 protein_id : NP_059076.1

name	Tnrc6c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378035 GeneID:217351 MGI:2443265
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : trinucleotide repeat containing 6C protein_id : NP_932139.2

name	Tmc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441274 CCDS:CCDS25687.1 GeneID:217353 MGI:1098686
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; transmembrane channel-like protein 6 product : transmembrane channel-like protein 6 isoform 1 protein_id : NP_663414.2

name	Tmc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044457 CCDS:CCDS25688.1 GeneID:217353 MGI:1098686
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; transmembrane channel-like protein 6 product : transmembrane channel-like protein 6 isoform 2 protein_id : NP_851838.1

name	Tmc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32469503 CCDS:CCDS25689.1 GeneID:217356 MGI:2669037
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : transmembrane channel-like gene family 8 product : epidermodysplasia verruciformis 2 protein_id : NP_862904.1

name	6030468B19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20913795 GeneID:77727 MGI:1924977
definition	codon_start : 1 product : hypothetical protein LOC77727 protein_id : XP_126537.1

name	Syngr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106429 CCDS:CCDS25691.1 GeneID:20973 MGI:1328324
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_process : GO:0006605 - protein targeting [Evidence ISS] codon_start : 1 product : synaptogyrin 2 protein_id : NP_033330.1

name	Tk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678357 CCDS:CCDS25692.1 GeneID:21877 MGI:98763
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 exception : mismatches in translation product : thymidine kinase 1 protein_id : NP_033413.1

name	Afmid (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746157 CCDS:CCDS25693.1 GeneID:71562 MGI:2448704
definition	EC_number : 3.5.1.9 GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004061 - arylformamidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006569 - tryptophan catabolism [Evidence IEA]; GO:0019441 - tryptophan catabolism to kynurenine [Evidence IDA] codon_start : 1 note : fFormylkynureninase; formylkynureninase product : kynurenine formamidase protein_id : NP_082103.1

name	Birc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753090 CCDS:CCDS25694.1 GeneID:11799 MGI:1203517
definition	GO_component : GO:0005814 - centriole [Evidence ISS]; GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005881 - cytoplasmic microtubule [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0031021 - interphase microtubule organizing center [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0030496 - midbody [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0043234 - protein complex [Evidence ISS]; GO:0005876 - spindle microtubule [Evidence ISS] GO_function : GO:0043027 - caspase inhibitor activity [Evidence ISS]; GO:0048037 - cofactor binding [Evidence ISS]; GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS] [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0000910 - cytokinesis [Evidence ISS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0051303 - establishment of chromosome localization [Evidence ISS]; GO:0000086 - G2/M transition of mitotic cell cycle [Evidence ISS]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence IMP]; GO:0007067 - mitosis [Evidence IEA]; GO:0043154 - negative regulation of caspase activity [Evidence ISS]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0031536 - positive regulation of exit from mitosis [Evidence ISS]; GO:0045931 - positive regulation of progression through mitotic cell cycle [Evidence ISS]; GO:0031503 - protein complex localization [Evidence ISS]; GO:0031577 - spindle checkpoint [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; survivin; apoptosis inhibitor 4 product : baculoviral IAP repeat-containing 5 isoform 1 protein_id : NP_033819.1

name	Birc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59859890 CCDS:CCDS25695.1 GeneID:11799 MGI:1203517
definition	GO_component : GO:0005814 - centriole [Evidence ISS]; GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005881 - cytoplasmic microtubule [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0031021 - interphase microtubule organizing center [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0030496 - midbody [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0043234 - protein complex [Evidence ISS]; GO:0005876 - spindle microtubule [Evidence ISS] GO_function : GO:0043027 - caspase inhibitor activity [Evidence ISS]; GO:0048037 - cofactor binding [Evidence ISS]; GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS] [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0000910 - cytokinesis [Evidence ISS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0051303 - establishment of chromosome localization [Evidence ISS]; GO:0000086 - G2/M transition of mitotic cell cycle [Evidence ISS]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence IMP]; GO:0007067 - mitosis [Evidence IEA]; GO:0043154 - negative regulation of caspase activity [Evidence ISS]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0031536 - positive regulation of exit from mitosis [Evidence ISS]; GO:0045931 - positive regulation of progression through mitotic cell cycle [Evidence ISS]; GO:0031503 - protein complex localization [Evidence ISS]; GO:0031577 - spindle checkpoint [Evidence ISS] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; survivin; apoptosis inhibitor 4 product : baculoviral IAP repeat-containing 5 isoform 3 protein_id : NP_001012273.1

name	LOC546519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94390958 GeneID:546519
definition	codon_start : 1 product : hypothetical protein protein_id : XP_621267.2

name	Tha1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229133 GeneID:71776 MGI:1919026
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006520 - amino acid metabolism [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : threonine aldolase 1 protein_id : NP_082195.1

name	Socs3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671758 CCDS:CCDS25697.1 GeneID:12702 MGI:1201791
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0046627 - negative regulation of insulin receptor signaling pathway [Evidence IDA]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0001932 - regulation of protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : cytokine inducible SH2-containing protein 3; STAT-induced STAT inhibitor 3; cytokine-inducible SH2 protein 3; E2a-Pbx1 target gene in fibroblasts 10 product : suppressor of cytokine signaling 3 protein_id : NP_031733.1

name	Pgs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626163 CCDS:CCDS25698.1 GeneID:74451 MGI:1921701
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence ISS] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence ISS] codon_start : 1 product : silencer-associated factor protein_id : NP_598518.1

name	Dnahc17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262522 GeneID:69926 MGI:1917176
definition	codon_start : 1 note : overriding stop codons product : similar to hCG1813078 protein_id : XP_126677.7 transl_except : (pos:complement(117887371..117887373),aa:OTHER)

name	Pscd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543516 GeneID:19157 MGI:1334257
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 note : cytohesin 1 product : pleckstrin homology, Sec7 and coiled-coil domains 1 protein_id : NP_035310.2

name	Usp36 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390968 GeneID:72344 MGI:1919594
definition	codon_start : 1 product : ubiquitin specific protease 36 isoform 1 protein_id : XP_126772.5

name	Timp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543867 CCDS:CCDS25699.1 GeneID:21858 MGI:98753
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0009986 - cell surface [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0008047 - enzyme activator activity [Evidence IMP]; GO:0004857 - enzyme inhibitor activity [Evidence IEA]; GO:0005178 - integrin binding [Evidence IDA]; GO:0008191 - metalloendopeptidase inhibitor activity [Evidence TAS] [Evidence IMP] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0030814 - regulation of cAMP metabolism [Evidence IDA]; GO:0043408 - regulation of MAPKKK cascade [Evidence IDA]; GO:0045664 - regulation of neuron differentiation [Evidence IDA] [Evidence IMP] codon_start : 1 product : tissue inhibitor of metalloproteinase 2 protein_id : NP_035724.2

name	Ddc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946812 CCDS:CCDS25700.1 GeneID:58251 MGI:1929713
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : testis-specific protein DDC8 product : testis specific protein, Ddc8 protein_id : NP_067415.1

name	Lgals3bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755144 CCDS:CCDS25701.1 GeneID:19039 MGI:99554
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005044 - scavenger receptor activity [Evidence ISS] [Evidence TAS] codon_start : 1 note : peptidylprolyl isomerase C-associated protein; mama product : lectin, galactoside-binding, soluble, 3 binding protein protein_id : NP_035280.1

name	Cant1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71043972 CCDS:CCDS25702.1 GeneID:76025 MGI:1923275
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004382 - guanosine-diphosphatase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017110 - nucleoside-diphosphatase activity [Evidence IEA]; GO:0045134 - uridine-diphosphatase activity [Evidence ISS] GO_process : GO:0009191 - ribonucleoside diphosphate catabolism [Evidence IC] codon_start : 1 note : apyrase 1, homolog (C. lectularius) product : Ca2+-dependent endoplasmic reticulum nucleoside diphosphatase protein_id : NP_001020788.1

name	Cant1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71043964 CCDS:CCDS25702.1 GeneID:76025 MGI:1923275
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004382 - guanosine-diphosphatase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017110 - nucleoside-diphosphatase activity [Evidence IEA]; GO:0045134 - uridine-diphosphatase activity [Evidence ISS] GO_process : GO:0009191 - ribonucleoside diphosphate catabolism [Evidence IC] codon_start : 1 note : apyrase 1, homolog (C. lectularius) product : Ca2+-dependent endoplasmic reticulum nucleoside diphosphatase protein_id : NP_001020789.1

name	Cant1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71043951 CCDS:CCDS25702.1 GeneID:76025 MGI:1923275
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004382 - guanosine-diphosphatase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017110 - nucleoside-diphosphatase activity [Evidence IEA]; GO:0045134 - uridine-diphosphatase activity [Evidence ISS] GO_process : GO:0009191 - ribonucleoside diphosphate catabolism [Evidence IC] codon_start : 1 note : apyrase 1, homolog (C. lectularius) product : Ca2+-dependent endoplasmic reticulum nucleoside diphosphatase protein_id : NP_083778.2

name	C1qtnf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910610 CCDS:CCDS25703.1 GeneID:56745 MGI:1919254
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006817 - phosphate transport [Evidence IEA]; GO:0051260 - protein homooligomerization [Evidence IDA] codon_start : 1 note : putative secreted protein ZSIG37; mouse ortholog product : C1q and tumor necrosis factor related protein 1 protein_id : NP_064343.1

name	D230014K01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369816 CCDS:CCDS25704.1 GeneID:217364 MGI:2443788
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : hypothetical protein LOC217364 protein_id : NP_766161.1

name	D11Bwg0517e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85677499 CCDS:CCDS25705.1 GeneID:52897 MGI:106368
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed isoform 3 protein_id : NP_001020102.2

name	D11Bwg0517e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85677495 GeneID:52897 MGI:106368
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed isoform 2 protein_id : NP_001034257.1

name	D11Bwg0517e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85677497 CCDS:CCDS25706.1 GeneID:52897 MGI:106368
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed isoform 1 protein_id : NP_001034256.1

name	Enpp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71892414 CCDS:CCDS25707.1 GeneID:238011 MGI:3027917
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008252 - nucleotidase activity [Evidence ISS]; GO:0004767 - sphingomyelin phosphodiesterase activity [Evidence ISS] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0009117 - nucleotide metabolism [Evidence IEA]; GO:0006685 - sphingomyelin catabolism [Evidence ISS] codon_start : 1 product : ectonucleotide pyrophosphatase/phosphodiesterase 7 protein_id : NP_001025462.1

name	Cbx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542346 CCDS:CCDS25708.1 GeneID:12416 MGI:88289
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0031519 - PcG protein complex [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : M33 polycomb-like protein; hromobox homolog 2 product : chromobox homolog 2 protein_id : NP_031649.2

name	Cbx8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304947 CCDS:CCDS25709.1 GeneID:30951 MGI:1353589
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA]; GO:0031519 - PcG protein complex [Evidence IDA]; GO:0000151 - ubiquitin ligase complex [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006342 - chromatin silencing [Evidence ISS]; GO:0016574 - histone ubiquitination [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : polycomb 3 product : chromobox homolog 8 protein_id : NP_038954.1

name	Cbx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680862 CCDS:CCDS25710.1 GeneID:12418 MGI:1195985
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IEA] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : homeobox gene repression note : polycomb 2 homolog product : chromobox homolog 4 protein_id : NP_031651.1

name	EG667423 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94390955 GeneID:667423 MGI:3646811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 715 ESTs, 6 Proteins product : predicted gene, EG667423 pseudo : _no_value transcript_id : XR_002024.1

clone name	MSMg01-391H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341K01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-192D08.b	B6Ng01-192D08.g
ACC	GA015504	GA015505
length	1,172	747
definition	B6Ng01-192D08.b	B6Ng01-192D08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(117,803,565 - 117,804,577)	(117,955,263 - 117,956,009)
sequence	gaattctcttaaagttaaaaaaaaaaatgcaactgggcagggtgggccca cacttgtgatcccagcatgtgagagatagaagacaagatggggtcatact tggctacatgtctagttcaaggccagctcaggctacaggacaccttcaca cacacacacacacacacacacacacacacacacacactcacacatacaca catatgcatgcacacacagacaacaaataccaagggactgggatgatggc ttgtgggtaaaatgcttgctgaagaagcacacggacctgagtttgaaacc cagcacccacagtaccatgtggttgtaatcccagtactcaggagggaggg agaagaggatccctggcacttgctggcaggccactctaccctgatcagta agctctaagttgagtaagagaccctgtcccagaaaacaagatggaaggcc cagagagacagagatagctccatcgtgaagatctgcaccgttctcgcata agaccaagctcagatcccagctccacacctgcctaaaccctgcctccggg aggaactgaaggcttcccaggcacttcatttacatgcaaccttccccata cacataaacattaaacatacacacatacacaaaataataataataataga agtaagaaatacaagggcatggtggtgcctacctgtgatatcagtattta agaggctgaggcagaaggactgccataagtcagaggcaagcctgtgctat atggtagaagtttgcatcaaaatgaacaaacaaaagcttaagatatccct gcatggggttttagagaaatagctcagtggttaagagcatttggctggtt ttcccaaaggaccagggttcaattcccagcacccacatggcccgctcaca aacaagttctgcaactccagtctcagggggagcccatactctctgtggtc ctctgcagggaactagggtatacaggacatagatgcagggaagaatacct caaacacatacatttgattttcaagaacaaagaaaaggagtttaattagt ctggcagtaggtgggtgccaccgccctttttattcaaggcactttgggga ggcagagcagggcagaattttctggagtttggaggcccagcctgggtctt acaagagttgaatttcaagaca	gaattcaaagtgagctgggacactgggtgttcccagagacggctgctatg ggtggcatagacttcaatccttctgtcctcccttctcccccacccccagg ctttgatggaggatgctgtgaagacaccaaacgtggtggaagccacaaac aaaccggatctctataacaaactggagaacctgaagatgaggtgggtctc catcccatatgtccagttgaggtgttgatgggacaggtcatgtgccacct gctgtgcaaaggcacaggtcacaggctaataatattccatccctgagatg gattaggacacacactgtgtgatcagagctggtggaggacaggggcatct ggagacgaatagggtctgtggagaaaaactagatgctttcagtaagccaa gggcatgggctggccaagagccctacagtaaaggacccaccagtcccttc cctcccttcctctccttccccttagcttggctgtgtgtgaaaaggcgctg gctgaatatctggagaccaagaggctggcgttcccacggttctattttgt ctcctccgccgatctgcttgatattctctccaacggaaacgaccccgtgg aggtaggcaggaatgcaatggtgtaaacccctgcacctaggagccctggc tggaggacaagctcacaatgtatcccgtgactttgggcaagtcacctgac tccaccctgcttgcctccttctatgggatgggtaagaagttgggggg
quality values	Open. Hide. 58 36 27 22 58 58 58 58 58 54 54 62 54 62 62 54 52 62 62 46 46 62 62 62 62 62 38 41 47 62 62 62 62 32 31 21 15 19 18 22 33 28 28 38 38 56 59 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 51 59 51 59 56 48 42 48 48 48 48 54 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 54 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 50 62 62 51 62 62 62 62 62 59 62 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 49 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 49 54 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 49 54 62 62 62 62 56 62 56 62 62 62 56 62 62 62 62 47 53 62 56 62 47 47 62 62 62 62 62 62 62 54 62 62 56 56 62 62 62 62 62 46 62 62 62 62 62 54 62 62 62 62 62 62 62 52 62 62 42 47 62 42 62 48 36 38 62 54 62 62 62 62 38 47 62 62 62 62 54 58 58 58 54 58 42 58 52 58 58 58 58 54 58 45 58 58 52 48 52 52 52 54 54 58 45 54 54 52 46 47 41 26 47 58 54 34 47 41 52 46 42 54 52 58 58 58 58 58 54 54 58 52 54 58 58 58 54 54 58 58 45 58 52 54 58 58 54 54 58 54 58 54 58 49 54 58 58 50 41 47 58 41 51 37 58 49 54 51 50 46 45 58 49 49 49 58 50 58 37 58 37 58 52 58 52 54 48 58 50 58 42 47 49 58 48 37 51 51 54 58 54 37 51 51 53 58 58 58 54 51 39 40 53 58 58 51 49 51 53 53 46 49 42 50 47 58 46 41 39 50 49 46 27 58 54 40 50 44 58 53 42 51 58 50 58 26 26 26 36 51 53 53 34 53 42 35 30 58 49 38 49 28 51 31 51 32 52 52 51 12 29 28 41 32 53 22 13 27 50 39 41 38 19 28 31 53 49 51 32 42 39 37 13 54 12 35 34 27 35 32 39 54 35 52 42 47 44 32 39 35 39 35 50 51 8 35 17 54 46 30 35 54 17 33 39 21 28 33 29 54 54 36 25 35 54 40 33 31 54 25 24 27 54 54 51 23 39 32 37 37 47 32 38 16 26 37 37 47 52 42 40 37 27 26 42 53 53 35 12 49 49 7 20 31 53 21 40 52 31 31 40 33 33 31 34 43 36 19 53 41 31 45 24 33 9 52 18 35 28 19 53 10 27 12 12 31 25 32 9 51 36 28 13 45 13 33 45 28 21 35 31 17 22 28 34 51 33 22 16 31 26 33 32 27 23 45 22 31 31 29 30 26 46 33 21 17 8 21 26 46 9 51 23 30 31 28 31 32 18 7 46 13 14 24 31 12 7 12 15 31 27 27 32 27 31 33 29 22 20 15 15 21 8 12 27 12 40 31 25 7 31 8 22 27 24 16 13 25 30 24 18 16 21 21 26 21 24 28 6 17 5 16 17 19 33 25 13 8 37 9 31 6 9 31 24 21 35 15 35 33 32 22 26 7 7 10 19 6 5 17 16 16 9 12 20 26 18 22 29 9 7 13 9 33 24 32 21 9 8 19 13 14 43 12 9 9 16 11 31 24 17 5 10 30 17 31 24 25 41 44 15 8 14 11 9 31 8 7 17 37 33 17 29 32 23 14 7 5 8 5 7 47 20 11 9 31 27 22 10 10 33 12 34 29 12 8 10 19 16 7 7 11 26 33 11 7 8 5 8 9 5 5 7 7 19 33 12 15 43 10 9 14 10 12 4 5 23 11 16 12 5 7 10 29 11 28 34 28 13 29 13 21 4 8 8 5 4 3 5 5 17 16 26 21 7 12 10 6 28 38 9 13 8 6 9 16 4 10 34 18 7 13 20 13 28 7 28 13 19 20 13 12 29 13 29 13 11 25 6 5 6 6 6 6 5 6 5 5 7 6 5 3 8 20 7 9 4 10 3 2 2 6	Open. Hide. 62 47 43 43 62 44 34 62 62 62 62 62 18 18 25 23 23 23 25 16 23 36 27 32 33 46 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 49 49 49 23 29 30 50 62 54 56 54 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 59 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 49 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 43 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 46 46 56 56 62 56 62 54 62 62 62 62 62 54 54 62 62 62 62 54 54 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 58 54 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 42 58 54 58 58 58 58 58 58 45 38 31 54 43 58 52 54 35 58 52 58 58 58 58 58 58 58 50 58 58 48 58 54 58 54 51 51 51 52 49 58 58 58 58 50 58 51 52 58 54 51 58 50 48 58 51 51 51 54 58 58 47 58 58 54 50 52 52 41 58 58 58 58 53 40 49 50 54 51 48 58 58 58 58 52 50 58 32 58 58 58 49 53 51 58 58 28 46 53 53 49 58 49 50 31 58 58 40 49 51 39 50 54 51 58 54 50 58 53 41 51 47 40 43 50 54 50 58 53 39 51 58 47 50 22 54 33 25 50 42 50 49 54 46 33 39 51 54 38 25 49 47 25 16 54 40 49 53 52 39 35 40 50 50 54 52 42 45 39 54 54 51 39 54 37 29 33 32 51 45 54 45 33 26 31 33 39 39 42 37 49 47 53 53 32 53 42 54 37 54 54 36 32 51 32 32 40 41 35 46 40 36 45 32 42 52 35 53 45 30 49 28 36 25 47 25 18 25 32 33 25 47 41 32 22 20 17 14 5 6 9 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_117803565_117804577
seq2: B6Ng01-192D08.b_43_1214

seq1  GAATTCTCTTAAAGTTAAAAAAAAAAATGCAACTGGGCAGGGTGGGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAAAGTTAAAAAAAAAAATGCAACTGGGCAGGGTGGGCCCA  50

seq1  CACTTGTGATCCCAGCATGTGAGAGATAGAAGACAAGATGGGGTCATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTGATCCCAGCATGTGAGAGATAGAAGACAAGATGGGGTCATACT  100

seq1  TGGCTACATGTCTAGTTCAAGGCCAGCTCAGGCTACAGGACACCTTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACATGTCTAGTTCAAGGCCAGCTCAGGCTACAGGACACCTTCACA  150

seq1  CACACACACACACACACACACACACACACACACACACTCACACATACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACTCACACATACACA  200

seq1  CATATGCATGCACACACAGACAACAAATACCAAGGGACTGGGATGATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCATGCACACACAGACAACAAATACCAAGGGACTGGGATGATGGC  250

seq1  TTGTGGGTAAAATGCTTGCTGAAGAAGCACACGGACCTGAGTTTGAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGTAAAATGCTTGCTGAAGAAGCACACGGACCTGAGTTTGAAACC  300

seq1  CAGCACCCACAGTACCATGTGGTTGTAATCCCAGTACTCAGGAGGGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCCACAGTACCATGTGGTTGTAATCCCAGTACTCAGGAGGGAGGG  350

seq1  AGAAGAGGATCCCTGGCACTTGCTGGCAGGCCACTCTACCCTGATCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGATCCCTGGCACTTGCTGGCAGGCCACTCTACCCTGATCAGTA  400

seq1  AGCTCTAAGTTGAGTAAGAGACCCTGTCCCAGAAAACAAGATGGAAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAAGTTGAGTAAGAGACCCTGTCCCAGAAAACAAGATGGAAGGCC  450

seq1  CAGAGAGACAGAGATAGCTCCATCGTGAAGATCTGCACCGTTCTCGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGACAGAGATAGCTCCATCGTGAAGATCTGCACCGTTCTCGCATA  500

seq1  AGACCAAGCTCAGATCCCAGCTCCACACCTGCCTAAACCCTGCCTCCGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGCTCAGATCCCAGCTCCACACCTGCCTAAACCCTGCCTCCGGG  550

seq1  AGGAACTGAAGGCTTCCCAGGCACTTCATTTACATGCAACCTTCCCCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGAAGGCTTCCCAGGCACTTCATTTACATGCAACCTTCCCCATA  600

seq1  CACATAAACATTAAACATACACACATACACAAAATAATAATAATAATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAACATTAAACATACACACATACACAAAATAATAATAATAATAGA  650

seq1  AGTAAGAAATACAAGGGCATGGTGGTGCCTACCTGTGATATCAGTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAAATACAAGGGCATGGTGGTGCCTACCTGTGATATCAGTATTTA  700

seq1  AGAGGCTGAGGCAGAAGGACTGCCATAAGTCAGAGGCAAGCCTGTGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGAGGCAGAAGGACTGCCATAAGTCAGAGGCAAGCCTGTGCTAT  750

seq1  ATGGTAGAAGTTTGCATCAAAATGAACAAACAAAAGCTTAAGATATCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGAAGTTTGCATCAAAATGAACAAACAAAAGCTTAAGATATCCCT  800

seq1  GCATGGGG-TTTAGAGAAATAGCTCAGTGGTTAAGAGCA-TTGGCTGGTT  848
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  GCATGGGGTTTTAGAGAAATAGCTCAGTGGTTAAGAGCATTTGGCTGGTT  850

seq1  TT-CCAAAGGACCAGGGTTCAATTCCCAGCACCCACATGG-CCGCTCAC-  895
      || ||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  TTCCCAAAGGACCAGGGTTCAATTCCCAGCACCCACATGGCCCGCTCACA  900

seq1  AACAAG-TCTGCAACTCCAGTCTCA-GGGGAGCCCATACTCTCTGTGG-C  942
      |||||| |||||||||||||||||| |||||||||||||||||||||| |
seq2  AACAAGTTCTGCAACTCCAGTCTCAGGGGGAGCCCATACTCTCTGTGGTC  950

seq1  CTCTGCA-GGAACTA-GGTATACA-GACATAGATGCAGGG-AGAATA-CT  987
      ||||||| ||||||| |||||||| ||||||||||||||| |||||| ||
seq2  CTCTGCAGGGAACTAGGGTATACAGGACATAGATGCAGGGAAGAATACCT  1000

seq1  CAAACACATACA-TTGA-TTTCAAG-ACA---------------------  1013
      |||||||||||| |||| ||||||| |||                     
seq2  CAAACACATACATTTGATTTTCAAGAACAAAGAAAAGGAGTTTAATTAGT  1050

seq1  --------------------------------------------------  1013
                                                        
seq2  CTGGCAGTAGGTGGGTGCCACCGCCCTTTTTATTCAAGGCACTTTGGGGA  1100

seq1  --------------------------------------------------  1013
                                                        
seq2  GGCAGAGCAGGGCAGAATTTTCTGGAGTTTGGAGGCCCAGCCTGGGTCTT  1150

seq1  ----------------------  1013
                            
seq2  ACAAGAGTTGAATTTCAAGACA  1172

seq1: chr11_117955263_117956009
seq2: B6Ng01-192D08.g_64_810 (reverse)

seq1  CCCCCCAACTTCTTACCCATCCCATAGAAGGAGGCAAGCAGGGTGGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAACTTCTTACCCATCCCATAGAAGGAGGCAAGCAGGGTGGAGTC  50

seq1  AGGTGACTTGCCCAAAGTCACGGGATACATTGTGAGCTTGTCCTCCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTTGCCCAAAGTCACGGGATACATTGTGAGCTTGTCCTCCAGCC  100

seq1  AGGGCTCCTAGGTGCAGGGGTTTACACCATTGCATTCCTGCCTACCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCCTAGGTGCAGGGGTTTACACCATTGCATTCCTGCCTACCTCCA  150

seq1  CGGGGTCGTTTCCGTTGGAGAGAATATCAAGCAGATCGGCGGAGGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTCGTTTCCGTTGGAGAGAATATCAAGCAGATCGGCGGAGGAGACA  200

seq1  AAATAGAACCGTGGGAACGCCAGCCTCTTGGTCTCCAGATATTCAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAACCGTGGGAACGCCAGCCTCTTGGTCTCCAGATATTCAGCCAG  250

seq1  CGCCTTTTCACACACAGCCAAGCTAAGGGGAAGGAGAGGAAGGGAGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTTCACACACAGCCAAGCTAAGGGGAAGGAGAGGAAGGGAGGGAA  300

seq1  GGGACTGGTGGGTCCTTTACTGTAGGGCTCTTGGCCAGCCCATGCCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGTGGGTCCTTTACTGTAGGGCTCTTGGCCAGCCCATGCCCTTG  350

seq1  GCTTACTGAAAGCATCTAGTTTTTCTCCACAGACCCTATTCGTCTCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTGAAAGCATCTAGTTTTTCTCCACAGACCCTATTCGTCTCCAGA  400

seq1  TGCCCCTGTCCTCCACCAGCTCTGATCACACAGTGTGTGTCCTAATCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGTCCTCCACCAGCTCTGATCACACAGTGTGTGTCCTAATCCAT  450

seq1  CTCAGGGATGGAATATTATTAGCCTGTGACCTGTGCCTTTGCACAGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGATGGAATATTATTAGCCTGTGACCTGTGCCTTTGCACAGCAGG  500

seq1  TGGCACATGACCTGTCCCATCAACACCTCAACTGGACATATGGGATGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATGACCTGTCCCATCAACACCTCAACTGGACATATGGGATGGAG  550

seq1  ACCCACCTCATCTTCAGGTTCTCCAGTTTGTTATAGAGATCCGGTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCTCATCTTCAGGTTCTCCAGTTTGTTATAGAGATCCGGTTTGTT  600

seq1  TGTGGCTTCCACCACGTTTGGTGTCTTCACAGCATCCTCCATCAAAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTCCACCACGTTTGGTGTCTTCACAGCATCCTCCATCAAAGCCT  650

seq1  GGGGGTGGGGGAGAAGGGAGGACAGAAGGATTGAAGTCTATGCCACCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGGAGAAGGGAGGACAGAAGGATTGAAGTCTATGCCACCCAT  700

seq1  AGCAGCCGTCTCTGGGAACACCCAGTGTCCCAGCTCACTTTGAATTC  747
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCGTCTCTGGGAACACCCAGTGTCCCAGCTCACTTTGAATTC  747

BAC Information

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BAC

BAC End Information

Alignment Information