BAC Information

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BAC

Clone NameB6Ng01-199N14
Chromosome11 (Build37)
Map Location 104,783,318 - 104,784,346
singlet/doubletsinglet
Overlap geneLOC632784
Upstream geneNsf, Arf2, LOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749
Downstream geneLOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199N14.g
ACCGA021073
length1,034
definitionB6Ng01-199N14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacatctggctgaggtgtcactagaaagaggcaacctgaagcaa
ggaaacacaaggaaaacagggacagtcagtgcaaaggaaagtttactggg
atacaagcaatgaaagataaattaaaatggtggcggagaaacaaagacta
gcttgtagggataaggatcaaacctctccaaagggcttcacatttgcaga
gactatttccttccatcaatgtaaaacagagacaacgtttcaaagaatat
gacaccacctatttggttccttgtcattgatcaagatacaattaatactg
atcagtgtattgtattgagaccctcttttccaacatctggaaagacacta
tgtgttgtatacattcatccattcatacatacattaactgatttttacca
tttttaaagaggcattacaaaacattacaaagacagaattacttccctaa
attaagttctcaattgaaccaattgcttaatttctatttattgtgatctc
ttgagaatttcacacaggagtaataatgtatagacataatttctggtttt
tttcacatgattctggacagtcattttattgataaaatatttgagtggat
ggctaacggatgcctagaaacaaccacaaaggaaactggaaaatgcactg
taaagcatgcacactcctcttatttaagtagttaagtctgtgcattaggg
caataaagtatattctggaatttaaagcctctgagttttgacgttagctt
ggactttgctctctatctgatcgcaagtaatcatcattaacacctgtgag
catccttttccctctgagccttccgctcagaactgaacatccatctcaaa
ggttttcaaagtcaacacagcagcctgtgtgacttcctctccgtgaacgt
aatgtgcacgttgagtctttgacgctggtgggttccagaagtgaacaaga
ttccctcacttcatgttctgctgcgtaattttttttccaaaataccaaac
tagaattttttttaagttatagaactttaattaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_104783318_104784346
seq2: B6Ng01-199N14.g_65_1098

seq1  GAATTCCACATCTGGCTGAGGTGTCACTAGAAAGAGGCAACCTGAAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCTGGCTGAGGTGTCACTAGAAAGAGGCAACCTGAAGCAA  50

seq1  GGAAACACAAGGCAAACAGGGACAGTCAGTGCAAAGGAAAGTTTACTGGG  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAAGGAAAACAGGGACAGTCAGTGCAAAGGAAAGTTTACTGGG  100

seq1  ATACAAGCAATGAAAGATAAATTAAAATGGTGGCGGAGAAACAAAGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCAATGAAAGATAAATTAAAATGGTGGCGGAGAAACAAAGACTA  150

seq1  GCTTGTAGGGATAAGGATCAAACCTCTCCAAAGGGCTTCAGATTTGCAGA  200
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTTGTAGGGATAAGGATCAAACCTCTCCAAAGGGCTTCACATTTGCAGA  200

seq1  GACTATTTCCTTCCATCAATGTAAAACAGAGACAACGTTTCAAAGAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GACTATTTCCTTCCATCAATGTAAAACAGAGACAACGTTTCAAAGAATAT  250

seq1  TACACCACCTATTTGGTTCCTTGTCATTGATCAAGATACAATTAAGACTG  300
       |||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACACCACCTATTTGGTTCCTTGTCATTGATCAAGATACAATTAATACTG  300

seq1  ATCAGTGTATTGTAGTGAGACCCTCTTTTCCAACATCTGGAAAGACACTA  350
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTATTGTATTGAGACCCTCTTTTCCAACATCTGGAAAGACACTA  350

seq1  TGTTTTGTATACATTCATCCATTCATACATACATTAACTGATTTTTACCA  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTATACATTCATCCATTCATACATACATTAACTGATTTTTACCA  400

seq1  GTTTTAAAGAGGCATTACAAAACATTACAAAGACAGAATTACTTCCCTAA  450
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGAGGCATTACAAAACATTACAAAGACAGAATTACTTCCCTAA  450

seq1  ATTAAGTTCTCAATTGAACCAGTTGCTTAATTTCTATTTATTTTGATCTC  500
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  ATTAAGTTCTCAATTGAACCAATTGCTTAATTTCTATTTATTGTGATCTC  500

seq1  TTGAGAATTTCACACAGGAGTAATAATGTATAGACATAATTTCTGGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATTTCACACAGGAGTAATAATGTATAGACATAATTTCTGGTTTT  550

seq1  TTTCACATGATTCTGGACAGTCATTTTATTGATAAAATATTTGAGTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATGATTCTGGACAGTCATTTTATTGATAAAATATTTGAGTGGAT  600

seq1  GGCTAACGGATGCCTAGAAACAACCACAAAGGAAACTGGAAAATGCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACGGATGCCTAGAAACAACCACAAAGGAAACTGGAAAATGCACTG  650

seq1  TAAAGCATGCACACTCCTCTTATTTAAGTAGTTAAGTCTGTGCATTAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATGCACACTCCTCTTATTTAAGTAGTTAAGTCTGTGCATTAGGG  700

seq1  CAATAAAGTATATTCTGGAATTTAAAGCCTCTGAGTTTTGACGTTAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTATATTCTGGAATTTAAAGCCTCTGAGTTTTGACGTTAGCTT  750

seq1  GGCCTTTGCTCTCTATCTGATCGCAAGTAATCATC-TTAACACCTGTGAG  799
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGACTTTGCTCTCTATCTGATCGCAAGTAATCATCATTAACACCTGTGAG  800

seq1  CATCCTTTTCCCTCTGAGCCTTCCGCTCAGAACTGAACATCCATCTCAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTTCCCTCTGAGCCTTCCGCTCAGAACTGAACATCCATCTCAAA  850

seq1  GGTTTTCAAAGTCAACACAGCAGCCTGTGTGACTTCCTCTCCGTGAACGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGTTTTCAAAGTCAACACAGCAGCCTGTGTGACTTCCTCTCCGTGAACG-  899

seq1  TAATGTGCACGTTGAGTCTTTG-CGCTGGT-GGTTCCAGAAGGTGAAC-A  946
      |||||||||||||||||||||| ||||||| |||||||||| |||||| |
seq2  TAATGTGCACGTTGAGTCTTTGACGCTGGTGGGTTCCAGAA-GTGAACAA  948

seq1  GATTCCCTCACTTCATGTTTCCTGCTGCGTAA-TTTTTTTCCAAAATA-C  994
      |||||||||||||||||||  ||||||||||| ||||||||||||||| |
seq2  GATTCCCTCACTTCATGTT--CTGCTGCGTAATTTTTTTTCCAAAATACC  996

seq1  AAACTAGA--TTTTTTTAAGTTTATAG-ACTTT-ATTAA  1029
      ||||||||  |||||||||| |||||| ||||| |||||
seq2  AAACTAGAATTTTTTTTAAG-TTATAGAACTTTAATTAA  1034