BAC Information

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BAC

Clone NameB6Ng01-203N11
Chromosome11 (Build37)
Map Location 87,300,612 - 87,301,632
singlet/doubletsinglet
Overlap geneTex14
Upstream gene0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40, Ypel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c
Downstream geneSept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203N11.g
ACCGA023948
length1,033
definitionB6Ng01-203N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatgtagaccaagctagccccaaactcagaagctaatctgcc
tctgccttctgagtgctgacattaaaggtatgtgccaccccacctggcag
cagaatagttttcattccgaaggagttgaaactgctgcagcatcaactaa
atagccattgaatgcatacactattatatttccagtgaaagttgagctgg
tgggaccctggtgtgcaggaggtgggttgagtctagtgtgtggctgcatg
agtatcatttacatctattcccggcccatgttctccggccttctgtaggc
cattgtttccccttcttaggaaagctgtagttttcccatctgtaaaatga
aaaggttgcagaagctatgctttgtgattctttccaactctgactctctg
tacttgtatctgttgataatggtagccaggatccaggagggggtgagaga
ggcggagccaccaaccagggaaagagattctagcgactagagttgaggtg
caggtctaatgtattgcccagcagcaagtggggtttttttacacagcctt
tggaccaatggggaattgtcatgagctttggagtagccacctctcccact
gtcactatcaggagatgccaggctgccggcatctgaagggacttccatga
agactggggaagcagccaccaccctgttcagggccccttctgaggttcta
ctagattgctaggaccctctgttttcggtcatgctgtgtgccagtggaca
cggcacctctgttactagagcgacatggaaacctcctttactgttctctg
ggacccacccaagaggtctcagtgcccacactgatggaagatgaatccat
ctctcagatttaacaacttcaggcactaagtgcttgtggtgaattttttg
gctgcaccacttttgtgctccctgcaagtcacaggcgcacacctgcccag
gaagctagtgggcacttacctgaaaacctcacatgggctggatggcttta
cctccttgccacctactggcgtcccttccttct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87300612_87301632
seq2: B6Ng01-203N11.g_65_1097

seq1  GAATTCACTATGTAGACCAAGCTAGCCCCAAACTCAGAAGCTAATCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACCAAGCTAGCCCCAAACTCAGAAGCTAATCTGCC  50

seq1  TCTGCCTTCTGAGTGCTGACATTAAAGGTATGTGCCACCCCACCTGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCTGAGTGCTGACATTAAAGGTATGTGCCACCCCACCTGGCAG  100

seq1  CAGAATAGTTTTCATTCCGAAGGAGTTGAAACTGCTGCAGCATCAACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAGTTTTCATTCCGAAGGAGTTGAAACTGCTGCAGCATCAACTAA  150

seq1  ATAGCCATTGAATGCATACACTATTATATTTCCAGTGAAAGTTGAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCATTGAATGCATACACTATTATATTTCCAGTGAAAGTTGAGCTGG  200

seq1  TGGGACCCTGGTGTGCAGGAGGTGGGTTGAGTCTAGTGTGTGGCTGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCCTGGTGTGCAGGAGGTGGGTTGAGTCTAGTGTGTGGCTGCATG  250

seq1  AGTATCATTTACATCTATTCCCGGCCCATGTTCTCCGGCCTTCTGTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCATTTACATCTATTCCCGGCCCATGTTCTCCGGCCTTCTGTAGGC  300

seq1  CATTGTTTCCCCTTCTTAGGAAAGCTGTAGTTTTCCCATCTGTAAAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTCCCCTTCTTAGGAAAGCTGTAGTTTTCCCATCTGTAAAATGA  350

seq1  AAAGGTTGCAGAAGCTATGCTTTGTGATTCTTTCCAACTCTGACTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTGCAGAAGCTATGCTTTGTGATTCTTTCCAACTCTGACTCTCTG  400

seq1  TACTTGTATCTGTTGATAATGGTAGCCAGGATCCAGGAGGGGGTGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTATCTGTTGATAATGGTAGCCAGGATCCAGGAGGGGGTGAGAGA  450

seq1  GGCGGAGCCACCAACCAGGGAAAGAGATTCTAGCGACTAGAGTTGAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGAGCCACCAACCAGGGAAAGAGATTCTAGCGACTAGAGTTGAGGTG  500

seq1  CAGGTCTAATGTATTGCCCAGCAGCAAGTGGGGTTTTTTTACACAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTAATGTATTGCCCAGCAGCAAGTGGGGTTTTTTTACACAGCCTT  550

seq1  TGGACCAATGGGGAATTGTCATGAGCTTTGGAGTAGCCACCTCTCCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAATGGGGAATTGTCATGAGCTTTGGAGTAGCCACCTCTCCCACT  600

seq1  GTCACTATCAGGAGATGCCAGGCTGCCGGCATCTGAAGGGACTTCCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTATCAGGAGATGCCAGGCTGCCGGCATCTGAAGGGACTTCCATGA  650

seq1  AGACTGGGGAAGCAGCCACCACCCTGTTCAGGGCCCCTTCTGAGGTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGGGAAGCAGCCACCACCCTGTTCAGGGCCCCTTCTGAGGTTCTA  700

seq1  CTAGATTGCTAGGACCCTCTGTTTTCGGTCATGCTGTGTGCCAGTGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTGCTAGGACCCTCTGTTTTCGGTCATGCTGTGTGCCAGTGGACA  750

seq1  CGGCACCTCTGTTACTAGAGCGACATGGAAACCTCCTTTACTGTTCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACCTCTGTTACTAGAGCGACATGGAAACCTCCTTTACTGTTCTCTG  800

seq1  GGACCCACCCAAGAGGTCTCAGTGCCCACACTGATGGAAGATGAAT-CAT  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGACCCACCCAAGAGGTCTCAGTGCCCACACTGATGGAAGATGAATCCAT  850

seq1  CTCTCAGATTTAACAACTTCAGGCACTAAGTGCTTGTGGTGAA-TTTTTG  898
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTCTCAGATTTAACAACTTCAGGCACTAAGTGCTTGTGGTGAATTTTTTG  900

seq1  GCTGCACCAC-TTTGTGCTCCCTGCAAGTCACAGGCGCACACCTGCCCAG  947
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACCACTTTTGTGCTCCCTGCAAGTCACAGGCGCACACCTGCCCAG  950

seq1  G-AGCTAGTGGCCACTTACCTGAAAA-CTCACAT-GGCTGGATGGCTTTA  994
      | ||||||||| |||||||||||||| ||||||| |||||||||||||||
seq2  GAAGCTAGTGGGCACTTACCTGAAAACCTCACATGGGCTGGATGGCTTTA  1000

seq1  CCTCC-TGCCA-CTACT-GCGTCC---CCTTCT  1021
      ||||| ||||| ||||| ||||||   ||||||
seq2  CCTCCTTGCCACCTACTGGCGTCCCTTCCTTCT  1033