BAC Information

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BAC

Clone NameB6Ng01-207O19
Chromosome11 (Build37)
Map Location 50,579,323 - 50,714,495
singlet/doubletdoublet
Overlap geneAdamts2, Zfp354c, 9630041N07Rik, Grm6, Zfp454, Zfp2
Upstream geneLOC100040073, Gfpt2, Mapk9, Rasgef1c, Rnf130, LOC380696, Tbc1d9b, 3010026O09Rik, Sqstm1, Mgat4b, Ltc4s, Maml1, Canx, 1700121K02Rik, Hnrph1, Rufy1
Downstream geneZfp354b, Prop1, Olfr1379-ps1, Olfr1378, Olfr1377, Olfr226-ps1, Olfr51, Olfr54, Olfr1375-ps1, Zfp354a, LOC100040275, LOC382518, Olfr1374-ps1, 5133400J02Rik, LOC622699, BC049762, Clk4, Col23a1, Agxt2l2, Hnrpab, Nola2, Rmnd5b, C330016O10Rik, D930048N14Rik, 0610009B22Rik, Sec24a, LOC100040402, Sar1b, Phf15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207O19.bB6Ng01-207O19.g
ACCGA026939GA026940
length1,032765
definitionB6Ng01-207O19.b B6Ng01-207O19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,713,916 - 50,714,495)(50,579,323 - 50,580,085)
sequence
gaattcatatagaaaagattctaaacaaaattctgagttaatgaaaactt
caagaatgtttgtacaaaagaaagtatatggctgtgatgagtgtgggaaa
accttcaggcagagttcatccctgcttaagcatcagaggattcacactgg
ggagaaaccctacacatgcaacgtgtgtgacaagcatttcatcgaacgct
cctccctcactgtgcatcagaggactcacacgggagaaaaaccctacaaa
tgtcatgagtgtgggaaagcctttagtcagagtatgaaccttactgttca
tcagagaactcacactggagagaagccttatcagtgcaaagagtgtggga
aagcattccgcaagaattcatcccttattcaacacgaaaggattcatact
ggagagaagccctacaaatgtcatgattgtgggaaagcttttacacaaag
catgaatcttacagtgcaccagagaacccatactggtgaaaaaccctatg
aatgtaaccaatgtggcaaagccttcagccaaagcatgcaccttattgtt
catcagagaagtcacactggagagaaaccctatgaatgcagtgaatgtgg
gaaagcctttagtaaaagctcaactctcactctacatcagagaaatcaca
ctggagaaaagccctacaaatgtaacaagtgtggtaagtcctttagtcaa
agtacataccttatagaacatcagagacttcactccggagtgaaaccttt
tgaatgcaatcagtgtggaaaagctttcagtaagaattcttcccttactc
agcatcgcagaattcacaccggtgagaaaccttatgagtgtatgatctgt
ggaaagcatttcactggaagatcatccctaactgtacaccaagttataca
cactgggagagaagccctatgagtgcactgaatgtggaaaggcattcagc
caaagcggcctatctcattgaacatcaaaggattcatactggttgaaaaa
ccctatgaatgtgatcagttgtgggaaagctt
gaattctgggaaggtactcagcatgctacctctgggttcctactgggtct
gtgatggtaaagcttggttgtcagcgggataggatctggactcactgtgg
aaacaagtctctggttaactgtggctggaagagccaccctgaatgtggac
ggcaccatatgtaggctggggtcctgggttgaagaacagggagaaagcca
accgagcttcctggtggtgggtgtctgtcatgtgaccagccacctcctat
tcctgcccttgaactgagagccaagagaggcccctcgtcctttaagttga
ctttgtcaggcagtttgtcacagaaacgggactggtgactaatacaagga
atgcgacctcatctctgagagagtttaagccctgtaaaaccaaggtggct
ggagccaggaagtcctaagctgtgcttaccacagtcagggtgcactctag
ggcctataaaactatgacttagtctttggcaaaaagtggcacagacccat
agctcctactatgcatccctagttgtcactgtatcagctcccacccccta
gtccctccctgcctcatctccaggtcccattaggctccagtgggggcaaa
attggcaaccttacatgagaggtatgctgtttatctcgagctcacgggag
gcctccgagtcatctcaagctcttcctaaaacaacattttttctccattt
tctttatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_50713916_50714495
seq2: B6Ng01-207O19.b_43_622 (reverse)

seq1  GGGTTTCTCTCCAGTGTGACTTCTCTGATGAACAATAAGGTGCATGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTCCAGTGTGACTTCTCTGATGAACAATAAGGTGCATGCTTT  50

seq1  GGCTGAAGGCTTTGCCACATTGGTTACATTCATAGGGTTTTTCACCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGGCTTTGCCACATTGGTTACATTCATAGGGTTTTTCACCAGTA  100

seq1  TGGGTTCTCTGGTGCACTGTAAGATTCATGCTTTGTGTAAAAGCTTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTCTGGTGCACTGTAAGATTCATGCTTTGTGTAAAAGCTTTCCC  150

seq1  ACAATCATGACATTTGTAGGGCTTCTCTCCAGTATGAATCCTTTCGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATGACATTTGTAGGGCTTCTCTCCAGTATGAATCCTTTCGTGTT  200

seq1  GAATAAGGGATGAATTCTTGCGGAATGCTTTCCCACACTCTTTGCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGGGATGAATTCTTGCGGAATGCTTTCCCACACTCTTTGCACTGA  250

seq1  TAAGGCTTCTCTCCAGTGTGAGTTCTCTGATGAACAGTAAGGTTCATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTTCTCTCCAGTGTGAGTTCTCTGATGAACAGTAAGGTTCATACT  300

seq1  CTGACTAAAGGCTTTCCCACACTCATGACATTTGTAGGGTTTTTCTCCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAAAGGCTTTCCCACACTCATGACATTTGTAGGGTTTTTCTCCCG  350

seq1  TGTGAGTCCTCTGATGCACAGTGAGGGAGGAGCGTTCGATGAAATGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCCTCTGATGCACAGTGAGGGAGGAGCGTTCGATGAAATGCTTG  400

seq1  TCACACACGTTGCATGTGTAGGGTTTCTCCCCAGTGTGAATCCTCTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACGTTGCATGTGTAGGGTTTCTCCCCAGTGTGAATCCTCTGATG  450

seq1  CTTAAGCAGGGATGAACTCTGCCTGAAGGTTTTCCCACACTCATCACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCAGGGATGAACTCTGCCTGAAGGTTTTCCCACACTCATCACAGC  500

seq1  CATATACTTTCTTTTGTACAAACATTCTTGAAGTTTTCATTAACTCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTTTCTTTTGTACAAACATTCTTGAAGTTTTCATTAACTCAGAA  550

seq1  TTTTGTTTAGAATCTTTTCTATATGAATTC  580
      ||||||||||||||||||||||||||||||
seq2  TTTTGTTTAGAATCTTTTCTATATGAATTC  580

seq1: chr11_50579323_50580085
seq2: B6Ng01-207O19.g_65_829

seq1  GAATTCTGGGAAGGTACTCAGCATGCTACCTCTGGGTTCCTACTGGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGGTACTCAGCATGCTACCTCTGGGTTCCTACTGGGTCT  50

seq1  GTGATGGTAAAGCTTGGTTGTCAGCGGGATAGGATCTGGACTCACTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTAAAGCTTGGTTGTCAGCGGGATAGGATCTGGACTCACTGTGG  100

seq1  AAACAAGTCTCTGGTTAACTGTGGCTGGAAGAGCCACCCTGAATGTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTCTCTGGTTAACTGTGGCTGGAAGAGCCACCCTGAATGTGGAC  150

seq1  GGCACCATATGTAGGCTGGGGTCCTGGGTTGAAGAACAGGGAGAAAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCATATGTAGGCTGGGGTCCTGGGTTGAAGAACAGGGAGAAAGCCA  200

seq1  ACCGAGCTTCCTGGTGGTGGGTGTCTGTCATGTGACCAGCCACCTCCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGCTTCCTGGTGGTGGGTGTCTGTCATGTGACCAGCCACCTCCTAT  250

seq1  TCCTGCCCTTGAACTGAGAGCCAAGAGAGGCCCCTCGTCCTTTAAGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCCTTGAACTGAGAGCCAAGAGAGGCCCCTCGTCCTTTAAGTTGA  300

seq1  CTTTGTCAGGCAGTTTGTCACAGAAACGGGACTGGTGACTAATACAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCAGGCAGTTTGTCACAGAAACGGGACTGGTGACTAATACAAGGA  350

seq1  ATGCGACCTCATCTCTGAGAGAGTTTAAGCCCTGTAAAACCAAGGTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGACCTCATCTCTGAGAGAGTTTAAGCCCTGTAAAACCAAGGTGGCT  400

seq1  GGAGCCAGGAAGTCCTAAGCTGTGCTTACCACAGTCAGGGTGCACTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGGAAGTCCTAAGCTGTGCTTACCACAGTCAGGGTGCACTCTAG  450

seq1  GGCCTATAAAACTATGACTTAGTCTTTGGCAAAAAGTGGCACAGACCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATAAAACTATGACTTAGTCTTTGGCAAAAAGTGGCACAGACCCAT  500

seq1  AGCTCCTACTATGCATCCCTAGTTGTCACTGTATCAGCTCCCACCCCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTACTATGCATCCCTAGTTGTCACTGTATCAGCTCCCACCCCCTA  550

seq1  GTCCCTCCCTGCCTCATCTCCAGGTCCCATTAGGCTCCAGTGGGGGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCCTGCCTCATCTCCAGGTCCCATTAGGCTCCAGTGGGGGCAAA  600

seq1  ATTGGCAACCTTACATGAGAGGTATGCTGTTTATCTCGAGCTCACGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAACCTTACATGAGAGGTATGCTGTTTATCTCGAGCTCACGGGAG  650

seq1  GCCTCCGAGTCATCTCAAGCTCTTCCTAAAACAACA-TTTTTCTCCA-TT  698
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  GCCTCCGAGTCATCTCAAGCTCTTCCTAAAACAACATTTTTTCTCCATTT  700

seq1  TCTTTATATATATATATATATATATATATATATATATATATATATATATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATATATATATATATATATATATATATATATATATATATATATA  750

seq1  TATATATATATATAT  763
      |||||||||||||||
seq2  TATATATATATATAT  765