BAC Information

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BAC

Clone NameB6Ng01-208B09
Chromosome14 (Build37)11 (Build37)
Map Location 5,133,837 - 5,133,90496,617,230 - 96,617,671
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374
Downstream gene4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208B09.bB6Ng01-208B09.g
ACCGA027061GA027062
length98436
definitionB6Ng01-208B09.b B6Ng01-208B09.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(5,133,837 - 5,133,904)(96,617,230 - 96,617,671)
sequence
tttgcctctactcaaaattaccaaaaaagaatgaaggaagaggagaaggg
ggaagaggaggaagagaaggaggaagaggagaagggggaagaggatat
ctaggaatataatcaaattaacttttaacagctacttgggaggctgaggc
aggaggatcatgaattcaaggcaccctgggctgcagatcaagacccacaa
tatatagagacgtaacttttaagtaataaagcatatgcattaagctgctg
ggcagtggtggcacacgcctttgatcccagcacttggaaggcagaggcag
acggatttctgagttcgaggccagcctggtctacagagtgagttctagga
cagccagggctacacagagaaaccctgtctcgggaaaaaaaaaaaaaaaa
agttttatgagcaagaacaccatgctttggtaggttgttttggtttggtt
tttgctttgttttttttttgttttttttgtttgtttttgtttgttttttg
attgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5133837_5133904
seq2: B6Ng01-208B09.b_85_149 (reverse)

seq1  ATATCCT------CCTTCTCCTCTTCCTCCTCTGTCTTCTCTTCCTCCTC  44
      |||||||      ||||||||||||||||      |||||||||||||||
seq2  ATATCCTCTTCCCCCTTCTCCTCTTCCTC------CTTCTCTTCCTCCTC  44

seq1  TTCTTCATCTATTCATTCTTCCTT  68
      |||  |  ||  ||  ||||||||
seq2  TTC--CCCCTTCTC-CTCTTCCTT  65

seq1: chr11_96617230_96617671
seq2: B6Ng01-208B09.g_69_510

seq1  GAATTCCTAGGAATATAATCAAATTAACTTTTAACAGCTACTTGGGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGAATATAATCAAATTAACTTTTAACAGCTACTTGGGAGGC  50

seq1  TGAGGCAGGAGGATCATGAATTCAAGGCACCCTGGGCTGCAGATCAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGAGGATCATGAATTCAAGGCACCCTGGGCTGCAGATCAAGAC  100

seq1  CCACAATATATAGAGACGTAACTTTTAAGTAATAAAGCATATGCATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATATATAGAGACGTAACTTTTAAGTAATAAAGCATATGCATTAAG  150

seq1  CTGCTGGGCAGTGGTGGCACACGCCTTTGATCCCAGCACTTGGAAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGCAGTGGTGGCACACGCCTTTGATCCCAGCACTTGGAAGGCAG  200

seq1  AGGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT  250

seq1  CTAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGGGAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGGGAAAAAAAAAA  300

seq1  AAAAAAAGTTTTATGAGCAAGAACACCATGCTTTGGTAGGTTGTTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTTTTATGAGCAAGAACACCATGCTTTGGTAGGTTGTTTTGGT  350

seq1  TTGGTTTTTGCTTTGTTTTTTTTTTGTTTTTTTTGTTTGTTTTTGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTGCTTTGTTTTTTTTTTGTTTTTTTTGTTTGTTTTTGTTTGT  400

seq1  TTTTTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  442
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  442