MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-209N17
Chromosome	11 (Build37)	14 (Build37)
Map Location	108,008,680 - 108,009,163	66,385,872 - 66,386,965
singlet/doublet	singlet	singlet
Overlap gene	Prkca
Upstream gene	Nol11, LOC671692, Pitpnc1, Psmd12, A830035A12Rik, Helz, Cacng1, Cacng4, Cacng5
Downstream gene	Apoh, LOC100041381, Ccdc46, Olfr1397-ps1, LOC629945, Axin2, E030025P04Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nol11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68979 MGI:1916229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671692 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pitpnc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71795 MGI:1919045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmd12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66997 MGI:1914247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830035A12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442842 MGI:3045382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Helz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78455 MGI:1925705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacng1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12299 MGI:1206582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacng4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54377 MGI:1859167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacng5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140723 MGI:2157946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18750 MGI:97595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11818 MGI:88058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041381 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Ccdc46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76380 MGI:1923673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Olfr1397-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258193 MGI:3031231
definition	gene_synonym : MOR5-3 note : olfactory receptor 1397, pseudogene 1 pseudo : _no_value

name	LOC629945 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Axin2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12006 MGI:1270862
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030025P04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268498 MGI:2685510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Nol11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526871 GeneID:68979 MGI:1916229
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein 11 transcript_id : NM_133702.1

name	Pitpnc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490397 GeneID:71795 MGI:1919045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol transfer protein, cytoplasmic 1 transcript_id : NM_145823.2

name	Psmd12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802643 GeneID:66997 MGI:1914247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 transcript_id : NM_025894.2

name	A830035A12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390904 GeneID:442842 MGI:3045382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA A830035A12 gene transcript_id : XM_986896.1

name	Helz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50355942 GeneID:78455 MGI:1925705
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : helicase with zinc finger domain transcript_id : NM_198298.1

name	Cacng1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778905 GeneID:12299 MGI:1206582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, gamma subunit 1 transcript_id : NM_007582.2

name	Cacng4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130751 GeneID:54377 MGI:1859167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, gamma subunit 4 transcript_id : NM_019431.2

name	Cacng5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370454 GeneID:140723 MGI:2157946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, gamma subunit 5 transcript_id : NM_080644.3

name	Prkca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364622 GeneID:18750 MGI:97595
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, alpha transcript_id : NM_011101.2

name	Apoh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400778 GeneID:11818 MGI:88058
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein H transcript_id : NM_013475.3

name	Ccdc46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125661051 GeneID:76380 MGI:1923673
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 46 transcript_id : NM_029606.3

name	Ccdc46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125661053 GeneID:76380 MGI:1923673
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 46 transcript_id : NM_145688.2

name	Ccdc46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125661055 GeneID:76380 MGI:1923673
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 46 transcript_id : NM_029586.2

name	LOC629945 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262550 GeneID:629945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to splicing factor, arginine/serine-rich 12 transcript_id : XM_001480021.1

name	Axin2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254369 GeneID:12006 MGI:1270862
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : axin2 transcript_id : NM_015732.3

name	E030025P04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390906 GeneID:268498 MGI:2685510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA E030025P04 gene transcript_id : XM_196056.4

name	Nol11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526872 CCDS:CCDS25566.1 GeneID:68979 MGI:1916229
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nucleolar protein 11 protein_id : NP_598463.1

name	Pitpnc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003862 CCDS:CCDS25567.1 GeneID:71795 MGI:1919045
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005545 - phosphatidylinositol binding [Evidence IC]; GO:0008526 - phosphatidylinositol transporter activity [Evidence ISS] GO_process : GO:0046488 - phosphatidylinositol metabolism [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : diabetic nephropathy-related protein product : retinal degeneration B beta protein_id : NP_665822.1

name	Psmd12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385384 CCDS:CCDS25568.1 GeneID:66997 MGI:1914247
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] codon_start : 1 product : proteasome 26S non-ATPase subunit 12 protein_id : NP_080170.1

name	A830035A12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390905 GeneID:442842 MGI:3045382
definition	codon_start : 1 product : hypothetical protein protein_id : XP_991990.1

name	Helz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50355943 CCDS:CCDS25569.1 GeneID:78455 MGI:1925705
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : helicase with zinc finger domain protein_id : NP_938040.1

name	Cacng1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671658 CCDS:CCDS25570.1 GeneID:12299 MGI:1206582
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : dihydropyridine receptor gamma 1 product : voltage-dependent calcium channel gamma-1 subunit protein_id : NP_031608.1

name	Cacng4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506455 CCDS:CCDS25571.1 GeneID:54377 MGI:1859167
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0019226 - transmission of nerve impulse [Evidence IGI]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : voltage-dependent calcium channel gamma-4 subunit protein_id : NP_062304.1

name	Cacng5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21687006 CCDS:CCDS25572.1 GeneID:140723 MGI:2157946
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : voltage dependent calcium channel gamma 5 subunit product : voltage-dependent calcium channel gamma-5 subunit protein_id : NP_542375.1

name	Prkca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755078 CCDS:CCDS25573.1 GeneID:18750 MGI:97595
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004698 - calcium-dependent protein kinase C activity [Evidence IDA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004697 - protein kinase C activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IMP]; GO:0002026 - cardiac inotropy [Evidence IMP]; GO:0000188 - inactivation of MAPK activity [Evidence IMP]; GO:0008629 - induction of apoptosis by intracellular signals [Evidence IMP]; GO:0050930 - induction of positive chemotaxis [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0046325 - negative regulation of glucose import [Evidence IMP]; GO:0046627 - negative regulation of insulin receptor signaling pathway [Evidence IMP]; GO:0001933 - negative regulation of protein amino acid phosphorylation [Evidence IMP]; GO:0006469 - negative regulation of protein kinase activity [Evidence IMP]; GO:0030593 - neutrophil chemotaxis [Evidence IMP]; GO:0050729 - positive regulation of inflammatory response [Evidence IMP]; GO:0001934 - positive regulation of protein amino acid phosphorylation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006937 - regulation of muscle contraction [Evidence IMP]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP] codon_start : 1 exception : mismatches in translation note : protein kinase c-alpha product : protein kinase C, alpha protein_id : NP_035231.1

name	Apoh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400779 CCDS:CCDS25574.1 GeneID:11818 MGI:88058
definition	GO_function : GO:0008201 - heparin binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : beta-2-glycoprotein 1 product : apolipoprotein H protein_id : NP_038503.3

name	Ccdc46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125661052 GeneID:76380 MGI:1923673
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : coiled-coil domain containing 46 isoform 2 protein_id : NP_083882.3

name	Ccdc46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125661054 GeneID:76380 MGI:1923673
definition	codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : coiled-coil domain containing 46 isoform 3 protein_id : NP_663721.2

name	Ccdc46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21729780 GeneID:76380 MGI:1923673
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : coiled-coil domain containing 46 isoform 1 protein_id : NP_083862.1

name	LOC629945 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262551 GeneID:629945
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480071.1

name	Axin2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254370 CCDS:CCDS25575.1 GeneID:12006 MGI:1270862
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007222 - frizzled signaling pathway [Evidence IEA]; GO:0001957 - intramembranous ossification [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045668 - negative regulation of osteoblast differentiation [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0030111 - regulation of Wnt receptor signaling pathway [Evidence IDA]; GO:0001756 - somitogenesis [Evidence IDA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : axin2 protein_id : NP_056547.3

name	E030025P04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82935421 GeneID:268498 MGI:2685510
definition	codon_start : 1 product : hypothetical protein protein_id : XP_196056.2

name	LOC671692 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671692
definition	number : 1 pseudo : _no_value

name	LOC671692 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671692
definition	number : 2 pseudo : _no_value

name	LOC671692 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671692
definition	number : 3 pseudo : _no_value

name	LOC100041381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041381
definition	number : 1 pseudo : _no_value

name	LOC100041381 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041381
definition	number : 2 pseudo : _no_value

clone name	MSMg01-171E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-299D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-209N17.b	B6Ng01-209N17.g
ACC	GA028361	GA028362
length	266	1,105
definition	B6Ng01-209N17.b	B6Ng01-209N17.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(108,008,680 - 108,009,163)	(66,385,872 - 66,386,965)
sequence	atgctgtccttagctacggaggctggcttagggcagtctggtctatctga gactgacaaaaaacaaaaaacaaataaaagttaagagaccatacattcgc tgggcggtggtggcgcacgcctttaatcccagcactcgggaggcagaggc aagcggatttctgagttcgaggccagcctggtctatatctatagagtgag ttccaagacagccagggctacacagagaaaccctgtctcgaaaaatgcaa gagagagagagagaga	gaattccagtacagccagggctacacagagaaaccctgtctcgaaaaatc aagagagagacagagagatagatagatagatagagagagagagagagaga gttagttctacatctggatccacaggcagcaggatgagaaacactgcacc tgaaacttcaaagttcacccaagtgacacacttccttcaacaaggccata catcctagcagtgccactccctatgggtctaagggagcattttcattcaa actaccactgatgctaaggtagtccaattaagtcctgagtgcatggtccc tgggccctaactcacctaacaataggcaggagtgtccagcacagaaccac agcagcctgggaggagaagtctgggctccacagtcctagatgctcctagg tggttgcttattaaagtccttacgcccgggagtctgctgtgggccactgc agtgtgctaaaagtcagcagatgtttctggaactccctcaaggaagtatg cttttctccaaaagcctgggtggtagcctacccttcctccctccctgtag tcaccatagtgattccatctatgggatcaagaccctgagaaaggcagtac cctccactgccacgcactccggtcgagtcagcttgacaggctgtgaagcc taaaagccactcacaaggcagagagtttcaaggaagctcacctcctggag tttatccatatactcatactctattcccgagttagtctggtgtatagatc tatgagctctcttttaatattttaatataaatgccttttaagattaaatt ctgttatagttagtctccccagtgtttcaagatcccagaagcgcgctgag tttagatcctgtgagaaggcagtaaggaagttaaccttattcagtaacta ataggcatttacaatagacagagccagtggctcaactggtctgcagaagg agccagggaatctcactgagatagaaagctcagttacaggctacattgcc atattaaagcaactttgttatattctcctgacacaattgggagaattctt ccgataccttaaaaggttacacctcaatatagagaatttagcaaggccct aggaa
quality values	Open. Hide. 16 41 47 62 59 44 44 43 62 62 62 62 62 62 62 59 59 62 62 59 59 59 62 62 62 49 34 50 28 28 21 38 30 27 38 56 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62	Open. Hide. 62 49 39 47 62 62 47 37 62 54 62 62 47 62 56 47 22 32 27 28 28 43 62 62 59 62 59 62 59 59 59 62 46 59 62 62 62 49 46 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 59 54 54 35 54 62 59 59 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 54 62 62 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 24 41 30 17 23 39 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 54 52 47 46 43 45 62 62 62 62 62 62 62 62 62 62 50 62 62 62 62 54 62 62 62 62 62 54 62 62 52 62 47 54 62 62 62 54 58 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 54 54 58 54 58 50 42 38 41 58 54 52 54 58 42 41 58 58 58 47 58 52 54 58 58 58 58 58 47 39 53 32 49 54 54 30 58 58 58 58 49 46 58 58 52 52 58 46 54 54 48 41 48 58 58 58 58 54 46 54 58 58 54 47 52 54 50 52 41 46 58 52 52 41 58 50 58 52 54 50 50 50 52 50 53 53 50 51 53 46 33 54 58 40 54 53 50 48 58 54 40 41 53 52 50 58 58 53 46 53 52 52 49 58 53 40 50 50 43 44 58 40 53 32 58 27 33 39 50 47 53 41 28 31 51 58 35 44 30 49 54 42 50 49 58 39 40 58 39 44 30 41 23 46 58 33 35 41 58 42 31 53 50 39 29 52 41 36 30 40 33 39 47 53 34 53 39 53 53 58 40 27 54 33 35 53 40 35 32 42 34 54 53 37 54 34 42 42 26 34 45 37 34 34 25 35 52 51 24 45 53 38 39 52 41 54 54 52 41 33 34 37 28 54 54 49 18 38 20 53 45 36 54 28 52 49 20 31 54 54 54 15 17 33 8 46 22 31 52 54 19 40 29 37 30 46 22 41 28 42 42 32 25 51 40 37 35 41 39 28 53 34 9 9 19 21 43 28 49 28 31 34 29 34 40 35 31 53 47 32 32 53 52 8 11 6 14 5 12 30 35 35 18 11 51 35 18 10 27 38 14 11 10 22 21 19 12 9 20 31 22 17 8 18 26 31 46 31 41 36 16 22 12 9 41 33 32 21 29 7 16 12 30 30 30 15 10 30 22 33 42 31 38 6 19 23 8 28 14 6 6 27 33 12 10 10 19 32 31 26 14 11 29 29 31 17 12 48 31 31 34 32 32 18 31 11 6 28 13 27 35 48 17 25 14 30 10 7 11 36 31 8 6 31 18 19 23 25 26 44 31 31 26 13 29 24 25 20 25 13 14 18 5 11 18 10 11 25 36 25 22 20 44 11 16 9 9 6 8 9 6 13 14 17 32 17 21 12 18 12 32 9 8 6 16 14 11 11 24 40 16 16 22 13 23 17 32 37 29 7 5 6 13 20 12 19 8 20 21 34 38 12 32 14 5 6 6 19 33 10 11 32 48 10 11 11 8 7 25 9 19 10 8 13 10 3 7 5 4 3 8 29 6 6 16 28 21 10 18 19 27 13 9 5 5 13 23 25 6 5 5 3 4 4 3 5 8 29 9 28 32 11 6 5 13 16 10 14 21 8 40 13 27 19 11 11 12 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_108008680_108009163
seq2: B6Ng01-209N17.b_139_317 (reverse)

seq1  TCTCTCTCTCTCTCTCTTTCTTTGGTTTTTCGAGACAGGGTTTCTCTGTA  50
      |||||||||||||||||| |     |||||||||||||||||||||||| 
seq2  TCTCTCTCTCTCTCTCTTGC----ATTTTTCGAGACAGGGTTTCTCTGTG  46

seq1  TAGCCCTGGCTGTTCTGGAACTCACT------TTGTAGACCAGGCTGGCC  94
      |||||||||||||  |||||||||||       | |||||||||||||||
seq2  TAGCCCTGGCTGTCTTGGAACTCACTCTATAGATATAGACCAGGCTGGCC  96

seq1  TCAAACTCAGAACTCAGAAACCCGCCTGTCTCTGCCTCCCGAGTGCTGGG  144
      ||       ||||||||||| |||| || |||||||||||||||||||||
seq2  TC-------GAACTCAGAAATCCGCTTGCCTCTGCCTCCCGAGTGCTGGG  139

seq1  ATTAAAGGCGTGCGCCACCA-CGCCCGGCTCCATTA--GTATCTCTTGAT  191
      |||||||||||||||||||| ||||| ||     ||  ||          
seq2  ATTAAAGGCGTGCGCCACCACCGCCCAGCGAATGTATGGT----------  179

seq1  CCAAGTCTTGTAGCGGGGTCTTCAGCGCTGTTGTGTTTTCCAGGATGTCT  241
                                                        
seq2  --------------------------------------------------  179

seq1  TTGGGGCAAAGCAATCCCTCTCTGCTCTCACCTCCATGGTAACAGTGTGT  291
                                                        
seq2  --------------------------------------------------  179

seq1  GCTCTGAGAGATGCATCTTGGATGATTTCCTCCTTACACGGACGACACCA  341
                                                        
seq2  --------------------------------------------------  179

seq1  CAGGAAATATTTATATAAACCTACCCACTACGTACCTTGGCTGTGTGGTG  391
                                                        
seq2  --------------------------------------------------  179

seq1  CAGCCCATTCCTCCTAATCCAGAATAAACAAGACAACACAAGATCAAGTT  441
                                                        
seq2  --------------------------------------------------  179

seq1  TATAACAAGAATGTCTGTCTATCAAATGTCATAAATGTATGGT  484
                                                 
seq2  -------------------------------------------  179

seq1: chr14_66385872_66386965
seq2: B6Ng01-209N17.g_67_1171

seq1  GAATTCCAGTACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAATC  50

seq1  AAGAGAGAGACAGAGAGATAGATAGATAGATAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGACAGAGAGATAGATAGATAGATAGAGAGAGAGAGAGAGAGA  100

seq1  GTTAGTTCTACATCTGGATCCACAGGCAGCAGGATGAGAAACACTGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTCTACATCTGGATCCACAGGCAGCAGGATGAGAAACACTGCACC  150

seq1  TGAAACTTCAAAGTTCACCCAAGTGACACACTTCCTTCAACAAGGCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTCAAAGTTCACCCAAGTGACACACTTCCTTCAACAAGGCCATA  200

seq1  CATCCTAGCAGTGCCACTCCCTATGGGTCTAAGGGAGCATTTTCATTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAGCAGTGCCACTCCCTATGGGTCTAAGGGAGCATTTTCATTCAA  250

seq1  ACTACCACTGATGCTAAGGTAGTCCAATTAAGTCCTGAGTGCATGGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCACTGATGCTAAGGTAGTCCAATTAAGTCCTGAGTGCATGGTCCC  300

seq1  TGGGCCCTAACTCACCTAACAATAGGCAGGAGTGTCCAGCACAGAACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTAACTCACCTAACAATAGGCAGGAGTGTCCAGCACAGAACCAC  350

seq1  AGCAGCCTGGGAGGAGAAGTCTGGGCTCCACAGTCCTAGATGCTCCTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTGGGAGGAGAAGTCTGGGCTCCACAGTCCTAGATGCTCCTAGG  400

seq1  TGGTTGCTTATTAAAGTCCTTACGCCCGGGAGTCTGCTGTGGGCCACTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTTATTAAAGTCCTTACGCCCGGGAGTCTGCTGTGGGCCACTGC  450

seq1  AGTGTGCTAAAAGTCAGCAGATGTTTCTGGAACTCCCTCAAGGAAGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTAAAAGTCAGCAGATGTTTCTGGAACTCCCTCAAGGAAGTATG  500

seq1  CTTTTCTCCAAAAGCCTGGGTGGTAGCCTACCCTTCCTCCCTCCCTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCCAAAAGCCTGGGTGGTAGCCTACCCTTCCTCCCTCCCTGTAG  550

seq1  TCACCATAGTGATTCCATCTATGGGATCAAGACCCTGAGAAAGGCAGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATAGTGATTCCATCTATGGGATCAAGACCCTGAGAAAGGCAGTAC  600

seq1  CCTCCACTGCCACGCACTCCGGTCGAGTCAGCTTGACAGGCTGTGAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACTGCCACGCACTCCGGTCGAGTCAGCTTGACAGGCTGTGAAGCC  650

seq1  TAAAAGCCACTCACAAGGCAGAGAGTTTCAAGGAAGCTCACCTCCTGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCCACTCACAAGGCAGAGAGTTTCAAGGAAGCTCACCTCCTGGAG  700

seq1  TTTATCCATATACTCATACTCTATTCCCGAGTTAGTCTGGTGTATAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCATATACTCATACTCTATTCCCGAGTTAGTCTGGTGTATAGATC  750

seq1  TATGAGCTCTCTTTTAATATTTTAATATAAATGCCTTTTAAGATTAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCTCTCTTTTAATATTTTAATATAAATGCCTTTTAAGATTAAATT  800

seq1  CTGTTATAGTTAGTCTCCCCAGTGTTTCAAGATCCCAGAAGCGGCCTGAG  850
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  CTGTTATAGTTAGTCTCCCCAGTGTTTCAAGATCCCAGAAGCGCGCTGAG  850

seq1  TTTAGATTCCTGTGAGAAGGCAGTAAGGAAGTTAACC-TATTCAGTAACT  899
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTAGA-TCCTGTGAGAAGGCAGTAAGGAAGTTAACCTTATTCAGTAACT  899

seq1  AATTAGGCA-TTACAATAGACAGAGCCAGTGGCTCAACTGGTCTGCAGAA  948
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AA-TAGGCATTTACAATAGACAGAGCCAGTGGCTCAACTGGTCTGCAGAA  948

seq1  AGAGCCAGGGAATCTCACTGAGATAGAAAGCTTCAG-TACAGGCTACATT  997
       |||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  GGAGCCAGGGAATCTCACTGAGATAGAAAGC-TCAGTTACAGGCTACATT  997

seq1  G-CATATTAAAAGCAACTTTG-TATATTCTCCTGACA-AAT--GGAG-AT  1041
      | |||||| |||||||||||| ||||||||||||||| |||  |||| ||
seq2  GCCATATT-AAAGCAACTTTGTTATATTCTCCTGACACAATTGGGAGAAT  1046

seq1  TCTCCAGATA-CTTAAAA-GTTACA-CTC-ATATA-AGAATTTAGCAAGG  1086
      ||| | |||| ||||||| |||||| ||| ||||| ||||||||||||||
seq2  TCTTCCGATACCTTAAAAGGTTACACCTCAATATAGAGAATTTAGCAAGG  1096

seq1  -CCTAGGAA  1094
       ||||||||
seq2  CCCTAGGAA  1105

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Alignment Information