BAC Information

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BAC

Clone NameB6Ng01-215C08
Chromosome11 (Build37)
Map Location 66,168,049 - 66,169,146
singlet/doubletsinglet
Overlap geneGm879
Upstream geneMap2k4, Zkscan6, Dnahc9
Downstream geneLOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215C08.bB6Ng01-215C08.g
ACCGA032199GA032200
length1,1551,195
definitionB6Ng01-215C08.b B6Ng01-215C08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaattctcagcagcctcttaaaacactggcatgactgcacaaac
cagcaacctcagcattgatgggggacggaggggagacagacggataccaa
ataaataaagcttgatttatttatttatttatttatttatttatttattt
atttatttatagctagcgtagcttccagttcactgagggaccctgacctt
aaggcaataaggcaaagagcaacacctaccaatcctgagttttggtccca
gcacctctgacacaaacatagcatggttccatgcattccttgaacccaat
gctgtgaagggcagagacaggatggctgacccttgctaacttctatccta
gttttttttttttttttaagtgagcctctaagttcagggagtgattctgc
cttataggaatgaagcaggcagggagtgataaaggaaaagaaccactgcc
cacctctgacctcactgcacaaagtatgactatctgcataggtatataca
caaccaccacatgaacatatacagtcgccctggcacagtattctcattaa
tacatatacacatacacacagttaaaattttaaaagaaatgtaggaagta
cttttttgttcaatgttctttttttctttattcctttattgaaaatatat
tcttttctcaaacactatttcctcattgtagtttcccctctccctacttc
ctccaagctcctccctacttcccccaaactcaagctcctccctacttccc
ccaaactcaagctcctccctacttcctccaagctcctccctacttccccc
atgctcctccctacttccctcaagcttctccctaattcccccaaactcaa
gctcctccctatgtccccttgcctctgaatttaaacccttttctttctcc
aattagaaaaacaacaggcttctaagagataacaaccaagcatgacaaga
taaaatatggcagataaagcaaaaaccatcacatccagacacaacaccca
tctggaggacaagagtcccaagacacgcactagatcaagacccacttgtt
cttacattggccagttccattaaacactaggataaagctacaatccacag
ccaagatctgctcagaaccatgaagccatgcctgcctgctgctgtctctg
gtgac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcaccagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggccattcctca
gaaaattggacatagtactactggaggatcgagcaatgccactcctgggc
atatatccagaagatgtcccaaccggtaataaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaacgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcctaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacgcccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
gggcccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgaaaccct
ataggtggaacacatataactaccagtaccccagacctcttgactctagc
tgcatatgtatcaagatgcctagtcgacatcactgaagagagcccatgac
acgcactgtaatgcccagttacagagaaccgccaggtcaaaatcattgac
tggctaggcaactggcggggccatcactctcactccgcatgatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66168049_66169146
seq2: B6Ng01-215C08.b_108_1196 (reverse)

seq1  GTCA-CAGAGACAGCAGCA-GCAAGCATGGGGCCTTCATGGGTCTGGAGC  48
      |||| |||||||||||||| ||| ||||||   |||||||| ||| ||||
seq2  GTCACCAGAGACAGCAGCAGGCAGGCATGG---CTTCATGGTTCT-GAGC  46

seq1  AGATCCTTTGCCTGTGAATTGTAGCTTTATCCTAGTGTTTTAATGGGACT  98
      |||||  ||| ||||| |||||||||||||||||||| |||||||| |||
seq2  AGATC--TTGGCTGTGGATTGTAGCTTTATCCTAGTG-TTTAATGGAACT  93

seq1  TGCCAATGTAAGAACAAGTGGGTCTTTGATTCTAGTGCGTGTCTTTGGGA  148
       ||||||||||||||||||||||| |||| ||||||||||||| ||||||
seq2  GGCCAATGTAAGAACAAGTGGGTC-TTGA-TCTAGTGCGTGTC-TTGGGA  140

seq1  CTCTTGTCCTCCAGATGGGTTGTTGTGTCTGGATGTGATGGTTTTTGCTT  198
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTTGTCCTCCAGATGGG-TGTTGTGTCTGGATGTGATGGTTTTTGCTT  189

seq1  TATCTTGCCATATTTTATCTTGTCATGCTTGGTTGTTATCTCTTAGAAGC  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATC-TGCCATATTTTATCTTGTCATGCTTGGTTGTTATCTCTTAGAAGC  238

seq1  CTGTTG-TTTTCTAATTGGAGAAAGAAAAGGGTTTAAATTCAGAGGCAAG  297
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTTTTCTAATTGGAGAAAGAAAAGGGTTTAAATTCAGAGGCAAG  288

seq1  GGGACATAGGGAGGAGCTTGAGTTTGGGGGAATTAGGGAGAAGCTTGAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATAGGGAGGAGCTTGAGTTTGGGGGAATTAGGGAGAAGCTTGAGG  338

seq1  GAAGTAGGGAGGAGCATGGGGGAAGTAGGGAGGAGCTTGGAGGAAGTAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGGAGGAGCATGGGGGAAGTAGGGAGGAGCTTGGAGGAAGTAGG  388

seq1  GAGGAGCTTGAGTTTGGGGGAAGTAGGGAGGAGCTTGAGTTTGGGGGAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTTGAGTTTGGGGGAAGTAGGGAGGAGCTTGAGTTTGGGGGAAG  438

seq1  TAGGGAGGAGCTTGGAGGAAGTAGGGAGAGGGGAAACTACAATGAGGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGGAGCTTGGAGGAAGTAGGGAGAGGGGAAACTACAATGAGGAAA  488

seq1  TAGTGTTTGAGAAAAGAATATATTTTCAATAAAGGAATAAAGAAAAAAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTGAGAAAAGAATATATTTTCAATAAAGGAATAAAGAAAAAAAG  538

seq1  AACATTGAACAAAAAAGTACTTCCTACATTTCTTTTAAAATTTTAACTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGAACAAAAAAGTACTTCCTACATTTCTTTTAAAATTTTAACTGT  588

seq1  GTGTATGTGTATATGTATTAATGAGAATACTGTGCCAGGGCGACTGTATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTGTATATGTATTAATGAGAATACTGTGCCAGGGCGACTGTATA  638

seq1  TGTTCATGTGGTGGTTGTGTATATACCTATGCAGATAGTCATACTTTGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATGTGGTGGTTGTGTATATACCTATGCAGATAGTCATACTTTGTG  688

seq1  CAGTGAGGTCAGAGGTGGGCAGTGGTTCTTTTCCTTTATCACTCCCTGCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGTCAGAGGTGGGCAGTGGTTCTTTTCCTTTATCACTCCCTGCC  738

seq1  TGCTTCATTCCTATAAGGCAGAATCACTCCCTGAACTTAGAGGCTCACTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCATTCCTATAAGGCAGAATCACTCCCTGAACTTAGAGGCTCACTT  788

seq1  AAAAAAAAAAAAAAAACTAGGATAGAAGTTAGCAAGGGTCAGCCATCCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAACTAGGATAGAAGTTAGCAAGGGTCAGCCATCCTG  838

seq1  TCTCTGCCCTTCACAGCATTGGGTTCAAGGAATGCATGGAACCATGCTAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCCTTCACAGCATTGGGTTCAAGGAATGCATGGAACCATGCTAT  888

seq1  GTTTGTGTCAGAGGTGCTGGGACCAAAACTCAGGATTGGTAGGTGTTGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTCAGAGGTGCTGGGACCAAAACTCAGGATTGGTAGGTGTTGCT  938

seq1  CTTTGCCTTATTGCCTTAAGGTCAGGGTCCCTCAGTGAACTGGAAGCTAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTTATTGCCTTAAGGTCAGGGTCCCTCAGTGAACTGGAAGCTAC  988

seq1  GCTAGCTATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA  1038

seq1  AATCAAGCTTTATTTATTTGGTATCCGTCTGTCTCCCCTCCGTCCCCCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGCTTTATTTATTTGGTATCCGTCTGTCTCCCCTCCGTCCCCCAT  1088

seq1  C  1098
      |
seq2  C  1089