BAC Information

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BAC

Clone NameB6Ng01-215J03
Chromosome11 (Build37)
Map Location 7,684,595 - 7,812,252
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3, LOC638720, Pkd1l1, LOC624800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215J03.bB6Ng01-215J03.g
ACCGA032494GA032495
length1,1151,062
definitionB6Ng01-215J03.b B6Ng01-215J03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,811,148 - 7,812,252)(7,684,595 - 7,685,652)
sequence
gaattcttcccatgccacatttgaggataagaagttgccaccaggctcga
gggctgattttttgtgcttgaccttggcatctgagttcccaggaccagca
aacaacaaatacagaaagataaaaatttcttagaattttttttttactca
gttgctgacttatggctgtgagccaaaactcaccagctaatcctgctggg
tagctgcagtttgtgggaaaagagcagtgcagcctggaacccagaaatct
gaatgcaccaagctcatcagcctgctccagcatgttgtaagcttaggtaa
ccaacccttctgaggactaaggagacagagaaaagaaacaaaatgaggag
catctctcctctggatatagaattcttactggatatagaatacttactgg
atatagaatacttacttcactcctttcccgttccttttctcaacacaaat
ttatacttatcaaagagtcgtacccaatcatccaggatccccttggttca
ttgctctggacactcagaaagctctcggtcccttattccaagatgaatcc
caaataattttatctcaacgtattccaagttcaatgtgagagtcttgatt
ttcatatcattttctgatactttgtaattattctctccatctgtattcct
gaaatagaaactctttagtatgttttaccatgtccctggttcttttctat
aaaattctacatgcatgtcttctggtgagtaggagggaacttaaagccct
tccccttccctaaatattaattatgttccttccattgagacttggagaaa
acagcaaataaaaccatgatgtacaggttggtttgtttggtttgtttcta
ccccataataatcacaggaagtgtgcccatggcattattctcttcaatat
actctaccatcttcatcctcttgagttaacagaataaatgccatgcttta
taaactaagcttgtctaggatttaaatcagacaggttctatgaaactgat
atgggaaaaaaataggattatcctaagacacctttttcctttcctttttt
tacccagcctactggatattcctttcctttttttctcttctcttcctctt
ctctgcttcttctct

gaattccatcaaacatttaagaaaaaataacgaacattgtcacagacaaa
ctttgaaagcagaagaggtgcactttgcaactaaatttcaaatagcaaaa
gcacacatgagccagtgattttaaagtgtatttctatctatattcccata
tcatttgacttttaaatcttttaaaacataatcaatagaatcgaacaatc
cacagaactataacgcacaatgatcaaaaagggtcagaatatagaagtat
aggctcagaaatataggcataattatctgaaaaatttaaaatagttaaca
tgcccttcctgtggggagttacagggatataaagagagactcactttacc
cacagtttacataactgcagtgcaatattactgccaggaatatggctttg
gtgtagtgtatgtgttgttctcataatttttgataaaattctgtcttaaa
gcttagaaattagcagctggtttagagcaagtgtttcttcacatactgtt
ttttttttttttttgtggaaaatgtgtgtaaatgtgtttggatggcgatc
agcttgtgtcatacacatggaaccaaagtggctacctcctgaagccaagc
aggaccctagtggagggataagtacaataatccaccccccaaaacctttt
gaccccaaatttctcctgtctaaaaggatgcagggacaaaaatgtagcag
agacagagagaatagccaaccaataaccggcccaacttgagacccatccc
acgggcatccctcaattccagacactactaatcatacccttttatgctta
cagacaggagcctaacatgactgtcctctgaaggctctaccagcagctaa
ctgaaacaaatgcaactacccacagtcaaacattggacagaggtcaggga
ccctatgctagagttgcgggaaggattgaaggccctgaaaaggataggaa
cttcacaggaagtccaacagtgtcaaataccctggaacccttgagaggat
cttagagactttagccacaattcaatgagcatacaccagcctggactgaa
ccccacccccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7811148_7812252
seq2: B6Ng01-215J03.b_44_1158 (reverse)

seq1  AGAGAAG-AGAAGAGAAGA-GAAGAGAAGAGAAAAAAAGAAAAGAAATAT  48
      ||||||| || |||||||| ||||||||||||||||||| |||| |||||
seq2  AGAGAAGAAGCAGAGAAGAGGAAGAGAAGAGAAAAAAAGGAAAGGAATAT  50

seq1  CAAGTA-GCTGGGTAAAAAAAGGAAAG--AAAAAGTGTCTTA-GATAATC  94
      | |||| ||||||||||||||||||||  |||| |||||||| |||||||
seq2  CCAGTAGGCTGGGTAAAAAAAGGAAAGGAAAAAGGTGTCTTAGGATAATC  100

seq1  CTATTTTTT--CCATATCAGTTTCATAG-ACCTGTCTGATTT-AATCCTA  140
      |||||||||  ||||||||||||||||| ||||||||||||| |||||||
seq2  CTATTTTTTTCCCATATCAGTTTCATAGAACCTGTCTGATTTAAATCCTA  150

seq1  GACAAGCTTAGTTTATAAAGCATGGCATTTATTCTGTTAACTCAAGAGGA  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCTTAGTTTATAAAGCATGGCATTTATTCTGTTAACTCAAGAGGA  200

seq1  TGAAGATGGTAGAGTATATTGAAGAGAATAATGCCATGGGCACACTTCCT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGGTAGAGTATATTGAAGAGAATAATGCCATGGGCACACTTCCT  250

seq1  GTGATTATTATGGGGTAGAAACAAACCAAACAAACCAACCTGTACATCAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATTATGGGGTAGAAACAAACCAAACAAACCAACCTGTACATCAT  300

seq1  GGTTTTATTTGCTGTTTTCTCCAAGTCTCAATGGAAGGAACATAATTAAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATTTGCTGTTTTCTCCAAGTCTCAATGGAAGGAACATAATTAAT  350

seq1  ATTTAGGGAAGGGGAAGGGCTTTAAGTTCCCTCCTACTCACCAGAAGACA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGAAGGGGAAGGGCTTTAAGTTCCCTCCTACTCACCAGAAGACA  400

seq1  TGCATGTAGAATTTTATAGAAAAGAACCAGGGACATGGTAAAACATACTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTAGAATTTTATAGAAAAGAACCAGGGACATGGTAAAACATACTA  450

seq1  AAGAGTTTCTATTTCAGGAATACAGATGGAGAGAATAATTACAAAGTATC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTCTATTTCAGGAATACAGATGGAGAGAATAATTACAAAGTATC  500

seq1  AGAAAATGATATGAAAATCAAGACTCTCACATTGAACTTGGAATACGTTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGATATGAAAATCAAGACTCTCACATTGAACTTGGAATACGTTG  550

seq1  AGATAAAATTATTTGGGATTCATCTTGGAATAAGGGACCGAGAGCTTTCT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAATTATTTGGGATTCATCTTGGAATAAGGGACCGAGAGCTTTCT  600

seq1  GAGTGTCCAGAGCAATGAACCAAGGGGATCCTGGATGATTGGGTACGACT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCCAGAGCAATGAACCAAGGGGATCCTGGATGATTGGGTACGACT  650

seq1  CTTTGATAAGTATAAATTTGTGTTGAGAAAAGGAACGGGAAAGGAGTGAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATAAGTATAAATTTGTGTTGAGAAAAGGAACGGGAAAGGAGTGAA  700

seq1  GTAAGTATTCTATATCCAGTAAGTATTCTATATCCAGTAAGAATTCTATA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATTCTATATCCAGTAAGTATTCTATATCCAGTAAGAATTCTATA  750

seq1  TCCAGAGGAGAGATGCTCCTCATTTTGTTTCTTTTCTCTGTCTCCTTAGT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGAGAGATGCTCCTCATTTTGTTTCTTTTCTCTGTCTCCTTAGT  800

seq1  CCTCAGAAGGGTTGGTTACCTAAGCTTACAACATGCTGGAGCAGGCTGAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGGGTTGGTTACCTAAGCTTACAACATGCTGGAGCAGGCTGAT  850

seq1  GAGCTTGGTGCATTCAGATTTCTGGGTTCCAGGCTGCACTGCTCTTTTCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGTGCATTCAGATTTCTGGGTTCCAGGCTGCACTGCTCTTTTCC  900

seq1  CACAAACTGCAGCTACCCAGCAGGATTAGCTGGTGAGTTTTGGCTCACAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACTGCAGCTACCCAGCAGGATTAGCTGGTGAGTTTTGGCTCACAG  950

seq1  CCATAAGTCAGCAACTGAGTAAAAAAAAAATTCTAAGAAATTTTTATCTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGTCAGCAACTGAGTAAAAAAAAAATTCTAAGAAATTTTTATCTT  1000

seq1  TCTGTATTTGTTGTTTGCTGGTCCTGGGAACTCAGATGCCAAGGTCAAGC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTGTTGTTTGCTGGTCCTGGGAACTCAGATGCCAAGGTCAAGC  1050

seq1  ACAAAAAATCAGCCCTCGAGCCTGGTGGCAACTTCTTATCCTCAAATGTG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAATCAGCCCTCGAGCCTGGTGGCAACTTCTTATCCTCAAATGTG  1100

seq1  GCATGGGAAGAATTC  1105
      |||||||||||||||
seq2  GCATGGGAAGAATTC  1115


seq1: chr11_7684595_7685652
seq2: B6Ng01-215J03.g_64_1125

seq1  GAATTCCATCAAACATTTAAGAAAAAATAACGAACATTGTCACAGACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAAACATTTAAGAAAAAATAACGAACATTGTCACAGACAAA  50

seq1  CTTTGAAAGCAGAAGAGGTGCACTTTGCAACTAAATTTCAAATAGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAGCAGAAGAGGTGCACTTTGCAACTAAATTTCAAATAGCAAAA  100

seq1  GCACACATGAGCCAGTGATTTTAAAGTGTATTTCTATCTATATTCCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACATGAGCCAGTGATTTTAAAGTGTATTTCTATCTATATTCCCATA  150

seq1  TCATTTGACTTTTAAATCTTTTAAAACATAATCAATAGAATCGAACAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGACTTTTAAATCTTTTAAAACATAATCAATAGAATCGAACAATC  200

seq1  CACAGAACTATAACGCACAATGATCAAAAAGGGTCAGAATATAGAAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAACTATAACGCACAATGATCAAAAAGGGTCAGAATATAGAAGTAT  250

seq1  AGGCTCAGAAATATAGGCATAATTATCTGAAAAATTTAAAATAGTTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGAAATATAGGCATAATTATCTGAAAAATTTAAAATAGTTAACA  300

seq1  TGCCCTTCCTGTGGGGAGTTACAGGGATATAAAGAGAGACTCACTTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTCCTGTGGGGAGTTACAGGGATATAAAGAGAGACTCACTTTACC  350

seq1  CACAGTTTACATAACTGCAGTGCAATATTACTGCCAGGAATATGGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTACATAACTGCAGTGCAATATTACTGCCAGGAATATGGCTTTG  400

seq1  GTGTAGTGTATGTGTTGTTCTCATAATTTTTGATAAAATTCTGTCTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTGTATGTGTTGTTCTCATAATTTTTGATAAAATTCTGTCTTAAA  450

seq1  GCTTAGAAATTAGCAGCTGGTTTAGAGCAAGTGTTTCTTCACATACTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAAATTAGCAGCTGGTTTAGAGCAAGTGTTTCTTCACATACTGTT  500

seq1  TTTTTTTTTTTTTTGTGGAAAATGTGTGTAAATGTGTTTGGATGGCGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTGTGGAAAATGTGTGTAAATGTGTTTGGATGGCGATC  550

seq1  AGCTTGTGTCATACACATGGAACCAAAGTGGCTACCTCCTGAAGCCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTGTCATACACATGGAACCAAAGTGGCTACCTCCTGAAGCCAAGC  600

seq1  AGGACCCTAGTGGAGGGATAAGTACAATAATCCACCCCCCAAAACCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCTAGTGGAGGGATAAGTACAATAATCCACCCCCCAAAACCTTTT  650

seq1  GACCCCAAATTTCTCCTGTCTAAAAGGATGCAGGGACAAAAATGTAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAAATTTCTCCTGTCTAAAAGGATGCAGGGACAAAAATGTAGCAG  700

seq1  AGACAGAGAGAATAGCCAACCAATAACCGGCCCAACTTGAGACCCATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGAATAGCCAACCAATAACCGGCCCAACTTGAGACCCATCCC  750

seq1  ACGGGCATCCCTCAATTCCAGACACTACTAATCATACCCTTTTATGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCATCCCTCAATTCCAGACACTACTAATCATACCCTTTTATGCTTA  800

seq1  CAGACAGGAGCCTAACATGACTGTCCTCTGAAGGCTCTACCAGCAGCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGAGCCTAACATGACTGTCCTCTGAAGGCTCTACCAGCAGCTAA  850

seq1  CTGAAACAAATGCAACTACCCACAGTCAAACATTGGACAGAGGTCAGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACAAATGCAACTACCCACAGTCAAACATTGGACAGAGGTCAGGGA  900

seq1  CCCTATGCTAGAGTTGCGGGAAGGATTGAAGGCCCTGAAAAGGATAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGCTAGAGTTGCGGGAAGGATTGAAGGCCCTGAAAAGGATAGGAA  950

seq1  CTTCACAGGAAGTCCAACAGTGTCAAATAACCTGGAACCC-TGAGA-GAT  998
      ||||||||||||||||||||||||||||| |||||||||| ||||| |||
seq2  CTTCACAGGAAGTCCAACAGTGTCAAATACCCTGGAACCCTTGAGAGGAT  1000

seq1  CTTAGAGAC-TTAGCCACCAATCAATGAGCATACACCAG-CTGGACTGAA  1046
      ||||||||| |||||||| | |||||||||||||||||| ||||||||||
seq2  CTTAGAGACTTTAGCCACAATTCAATGAGCATACACCAGCCTGGACTGAA  1050

seq1  CCCCACCCCCAC  1058
      ||||||||||||
seq2  CCCCACCCCCAC  1062


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