BAC Information

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BAC

Clone NameB6Ng01-216I14
Chromosome11 (Build37)
Map Location 69,239,249 - 69,239,395
singlet/doubletsinglet
Overlap geneDnahc2
Upstream genePik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15, Slc25a35, 2400006H24Rik, Pfas, 1500010J02Rik, Aurkb, 2310047M10Rik, Tmem107, Vamp2, Per1, Hes7, Aloxe3, Alox12b, Alox8, Gucy2e, Cntrob, Trappc1, Kcnab3, A030009H04Rik, Chd3, Cyb5d1, Lsmd1, Tmem88, Jmjd3
Downstream geneEfnb3, Wdr79, LOC100043030, Trp53, Atp1b2, Shbg, Sat2, LOC382532, Fxr2, Sox15, Mpdu1, Cd68, Eif4a1, Senp3, Tnfsf12-tnfsf13, Tnfsf13, Tnfsf12, LOC100041994, Polr2a, Amac1, Zbtb4, Chrnb1, Fgf11, Tmem102, 4933402P03Rik, 1700095G12Rik, Nlgn2, 1810027O10Rik, Plscr3, Tnk1, LOC432576, Kctd11, Centb1, 2810408A11Rik, 0610025P10Rik, Gps2, Eif5a, Ybx2, Slc2a4, LOC668442, Cldn7, Rai12, Dullard, Gabarap, Phf23, Dvl2, Acadvl, Dlg4, Asgr1, Asgr2, Mgl2, Mgl1, Slc16a11, Slc16a13, Bcl6b, 0610010K14Rik, D11Bwg0434e, Alox12, Alox12e, Alox15, LOC668466, Pelp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216I14.bB6Ng01-216I14.g
ACCGA033200GA033201
length894159
definitionB6Ng01-216I14.b B6Ng01-216I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagcctaccttcttgagttctttatatatattggatatttgtccct
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttgttgatgttgtcttttgccttgcagaagctttgcaacttcat
gaggtcccacttatcaattctcgatcttactgcagaagccattgctgttc
tattcaggaactttccccctgtacccatatctttgaggctttcccctact
ttctcctctataagtttcagtgtctcaggttttatgtggagttccttaat
acacttagatttgaccttagtacaaggagataggaatggatcaattcgca
ttattctacataataaccaccaattgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatgattttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcttctctgggtcttcaattctgttccattggt
ctacttgtctgttgctataccagtaccatgattttttttatcacaattgc
tctgtagtacagctttatgtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctatgtttttttgttattgtccta
ggccactcttgtaaaggcaaacactgagtcggggctggcttacaatttca
gaagtttagttcattgtcatcatggcaggaaacatggtaggacacagcag
atatagcagctagagaagtaactgggacttctacatcttgatccataggc
agaggggtagaaggagagggacaggagagtgagagggaggtagg
tgttaagaagctgggggaggcagaggcaggcggatttctgagttcgagac
cagcctggtctacaaagtgagttccaggacagccagggctacacagagaa
accctgtctcgaaaaaaccaaaaccaaaaagaagaaggaggaggaggagg
aggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_69239249_69239395
seq2: B6Ng01-216I14.g_85_229 (reverse)

seq1  CCTCCTCCTCCTCAGCCTCCTCCTCCTT-TTTTTTTTTTTTTTGGTTTTT  49
      ||||||||||||   ||||||||||||| || |||||  |||||||||||
seq2  CCTCCTCCTCCT---CCTCCTCCTCCTTCTTCTTTTTGGTTTTGGTTTTT  47

seq1  TTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTG  99
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTG  97

seq1  TAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCC  147
      ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGACCAGGCTGGTCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCC  145