BAC Information

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BAC

Clone NameB6Ng01-221N20
Chromosome11 (Build37)
Map Location 21,228,355 - 21,229,048
singlet/doubletsinglet
Overlap geneUgp2
Upstream geneSlc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035, Peli1, Vps54
Downstream geneLOC100042081, 4932414J04Rik, Mdh1, AV249152, Pgam1-ps1, LOC382494, LOC666047, Otx1, Ehbp1, LOC100042146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221N20.bB6Ng01-221N20.g
ACCGA037038GA037039
length922697
definitionB6Ng01-221N20.b B6Ng01-221N20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatttggctttttaattgggttatttggggtttttggaggtt
aacttcttgagttccttaaatattttggatatgagccctctgttggaggt
agggttagtgaagattttttttccccaatctgtaggttgctgatttgtcc
tattgactatgtcctttgtcttacagaagctttccagtttcatgaggtcc
cattcatcaattcttgatcttagagcctgagccattggagttctgtacaa
gaaatttccctctgtgccaatgagtttgaagctcttcccactttctctat
tagatgcagtgtatctggtcttatgttgagtttcttaatccaattggact
tgcactttgtgcaaggtaataaatatggacctattttgattcttctacat
acagaccaccagttagactagcaccatttattgaagatgctttcattttt
ccactgtatgttatttgcttctttgtcaaagatcaagtgttcgtaggtgt
atgggtttacatctgggtcttcaattacattccattggttgacctgtctg
tttctgtacaaatactatacagtttgtttgttttttaaattcactatttg
cttttgtagtacagcttgaggtcagggatggtgatttccctggaaattct
tttactattgagaattgttttggctatcctaggttttttgttttttccat
atgaagttaggaattttctcttttccatgttctgtgaagaatttgttgat
tggaatttttgatgagttttaacttgaattctgtagatttattcttgggt
caagatgagctattttcactatgttaaatcctaccaattccatgaggatg
ggagatctttctattcttcttgagatctttcatttatttttttcagggat
ttgaagttcttgtcattcacat
gaattctttaggtattaatgttccaaggagtcgttttctgcctgtgaaaa
ccacatcagatctcttgcttgtgatgtcaaacctctatagccttaacgca
ggatctctgaccatgagtgaaaagcgtgaattccctacagtgcccttggt
taaattaggcagttcttttaccaaggtaggtaactggaaagatacttgga
gaattatgttccactactgactttgtatggctccatctgtggtgtggttt
gaaggaactgactgcagtctctgcagttggtctggagaggagaaaagaat
gctttagttgttatcttttctcttctgagactgctttcactagtcagcaa
aagttaattctgctttaataaatatttattgtgcttctgccaccgcctag
gcagtttctagataaggaaacttagcagcaaactgaaatccctagcttta
taacattaacattctagacggagaagctaagaagccagttcatcacatgc
atagtttgtctctcactacagagaaagctacagagagacaaagcaaggac
agagttggagatgtgtggtggagggatggcgtcacgaccctggccggcca
cagagcctcatgaagaagctggggctgatgtgtattaaggcagaaagctt
catctaggcagggggtgataaggagacttagaaaaaccatacggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_21228355_21229048
seq2: B6Ng01-221N20.g_73_769 (reverse)

seq1  TAGCCGTGTGG-TTTTCTAAGTCTCCTTATCA-CCCCTGCCTAGCTGAAG  48
      ||||||| ||| |||||||||||||||||||| ||||||||||| |||||
seq2  TAGCCGTATGGTTTTTCTAAGTCTCCTTATCACCCCCTGCCTAGATGAAG  50

seq1  CTTTCTGCCTTAATACACATCAG-CCCAGCTTCTTCCTGAGGCTCTGTGG  97
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  CTTTCTGCCTTAATACACATCAGCCCCAGCTTCTTCATGAGGCTCTGTGG  100

seq1  CCGGCCAGGGTCGTGACGCCATCCCTCCACCACACATCTCCAACTCTGTC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCAGGGTCGTGACGCCATCCCTCCACCACACATCTCCAACTCTGTC  150

seq1  CTTGCTTTGTCTCTCTGTAGCTTTCTCTGTAGTGAGAGACAAACTATGCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTGTCTCTCTGTAGCTTTCTCTGTAGTGAGAGACAAACTATGCA  200

seq1  TGTGATGAACTGGCTTCTTAGCTTCTCCGTCTAGAATGTTAATGTTATAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAACTGGCTTCTTAGCTTCTCCGTCTAGAATGTTAATGTTATAA  250

seq1  AGCTAGGGATTTCAGTTTGCTGCTAAGTTTCCTTATCTAGAAACTGCCTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGGATTTCAGTTTGCTGCTAAGTTTCCTTATCTAGAAACTGCCTA  300

seq1  GGCGGTGGCAGAAGCACAATAAATATTTATTAAAGCAGAATTAACTTTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGTGGCAGAAGCACAATAAATATTTATTAAAGCAGAATTAACTTTTG  350

seq1  CTGACTAGTGAAAGCAGTCTCAGAAGAGAAAAGATAACAACTAAAGCATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAGTGAAAGCAGTCTCAGAAGAGAAAAGATAACAACTAAAGCATT  400

seq1  CTTTTCTCCTCTCCAGACCAACTGCAGAGACTGCAGTCAGTTCCTTCAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCCTCTCCAGACCAACTGCAGAGACTGCAGTCAGTTCCTTCAAA  450

seq1  CCACACCACAGATGGAGCCATACAAAGTCAGTAGTGGAACATAATTCTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCACAGATGGAGCCATACAAAGTCAGTAGTGGAACATAATTCTCC  500

seq1  AAGTATCTTTCCAGTTACCTACCTTGGTAAAAGAACTGCCTAATTTAACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTTTCCAGTTACCTACCTTGGTAAAAGAACTGCCTAATTTAACC  550

seq1  AAGGGCACTGTAGGGAATTCACGCTTTTCACTCATGGTCAGAGATCCTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCACTGTAGGGAATTCACGCTTTTCACTCATGGTCAGAGATCCTGC  600

seq1  GTTAAGGCTATAGAGGTTTGACATCACAAGCAAGAGATCTGATGTGGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGCTATAGAGGTTTGACATCACAAGCAAGAGATCTGATGTGGTTT  650

seq1  TCACAGGCAGAAAACGACTCCTTGGAACATTAATACCTAAAGAATTC  694
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGCAGAAAACGACTCCTTGGAACATTAATACCTAAAGAATTC  697