BAC Information

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BAC

Clone NameB6Ng01-224N13
Chromosome11 (Build37)
Map Location 111,385,363 - 111,532,866
singlet/doubletdoublet
Overlap geneLOC100041559, EG629966
Upstream geneLOC100041523, Kcnj16, Kcnj2, LOC667003, LOC100041539
Downstream geneLOC629967, LOC100041589, LOC100043020, EG668396, EG667038, LOC100041610, LOC671963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224N13.bB6Ng01-224N13.g
ACCGA039193GA039194
length1,014634
definitionB6Ng01-224N13.b B6Ng01-224N13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,385,363 - 111,386,375)(111,532,233 - 111,532,866)
sequence
gaattctctgatctactgtgttttgcaaagccgatttacaaagtgagaga
acagttcactcatgattctaaatccctggatttcctcctctaattgatta
tttagaagtaaaataaaaaaattaaaagagttttcattctgttaaaaggg
tttttttttaagtaaaagaaagaatgaaaagaagctgaagtatgattgtg
ttccatctctgtggtagatttcagaattactggttatctgatatgtggaa
aaaagaaatgcccaagaaaatctgggatatgaatgtttgtcctctgtgtt
ttctagaatgtcataatttttttttcctgcactagttaacaacttctggc
tttaatggaaatttggactttaagactgtaggaatatccatccaaccctc
tacttcttgtacattcctgaagccttcccaacctcgaaggcctagcttgg
tgctatatccagtgctccccacccccgtagtctgaatagcactacttgaa
catcccacaacctaagctattgtctacgttgcatcctagcaatgcaaggt
aagtccttatggccaaagactccatgtacttcaaacacaggacccagagg
tcctgagctggatctgacttttaagtctcttccccagtactagtctccat
gctactagatggttccattcaaactatcaagggattaaaacaactaactt
gcctatccaggtataacacctataaactacaatggccagcaatatactat
aaccctaagggtgcaacagcagtatgtatttctcgagggtaaccaacagc
tttctaatgagacttaaagcctgctcaacagaaagaaattgtgtctggta
gtggaaacctaactattcatggctagtgaggtcattggtctcagagaaga
aaactacaggtatcactttactaaatgaaggtaattcctaactgcattct
aggcacttattcttgtatgacacaggtaaggtgtaggcctcactcctatc
aaagaacttccatt

gaattccaacatctatcactccacagaatattacagtctctgttataatg
aaaaaaatcaattatgaccaaatttctgtaagtaattaatgtgcactaaa
tctattccttattttcatattttatattaatgaaaaatcagtttatagac
acttaaacatctataataacatgaggctatgcaaatccttttaggcagat
ctctatgcgacaaggaaataaattcaaaatggcttagtaacaatatattt
caaaaaaacatggagatttattccctgaaaaattcagcagttgaaactag
agcccttggtgcaatagtatttgaacttaggccatgggaagataattaca
tcatgaacttggaaccactatttatcccttatatagggaccactgatgct
ttcatgttttttccttcttgtaagaacacatggcggtctccagagtcgaa
tgggaacatcttatgtgagtctacctttaatgaatcctcataccctgata
ggttaaagaagtaaatatcagtttaattattccagttcattggaacgttg
atgtgaaggttcgaactaacaataggatgtactggtttttgggttttttg
ttttgttttgttttttgttttttgttttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_111385363_111386375
seq2: B6Ng01-224N13.b_48_1061

seq1  GAATTCTCTGATCTACTGTGTTTTGCAAAGCCGATTTACAAAGTGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATCTACTGTGTTTTGCAAAGCCGATTTACAAAGTGAGAGA  50

seq1  ACAGTTCACTCATGATTCTAAATCCCTGGATTTCCTCCTCTAATTGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCACTCATGATTCTAAATCCCTGGATTTCCTCCTCTAATTGATTA  100

seq1  TTTAGAAGTAAAATAAAAAAATTAAAAGAGTTTTCATTCTGTTAAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGTAAAATAAAAAAATTAAAAGAGTTTTCATTCTGTTAAAAGGG  150

seq1  TTTTTTTTTAAGTAAAAGAAAGAATGAAAAGAAGCTGAAGTATGATTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAAGTAAAAGAAAGAATGAAAAGAAGCTGAAGTATGATTGTG  200

seq1  TTCCATCTCTGTGGTAGATTTCAGAATTACTGGTTATCTGATATGTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTCTGTGGTAGATTTCAGAATTACTGGTTATCTGATATGTGGAA  250

seq1  AAAAGAAATGCCCAAGAAAATCTGGGATATGAATGTTTGTCCTCTGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATGCCCAAGAAAATCTGGGATATGAATGTTTGTCCTCTGTGTT  300

seq1  TTCTAGAATGTCATAATTTTTTTTTCCTGCACTAGTTAACAACTTCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAATGTCATAATTTTTTTTTCCTGCACTAGTTAACAACTTCTGGC  350

seq1  TTTAATGGAAATTTGGACTTTAAGACTGTAGGAATATCCATCCAACCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGGAAATTTGGACTTTAAGACTGTAGGAATATCCATCCAACCCTC  400

seq1  TACTTCTTGTACATTCCTGAAGCCTTCCCAACCTCGAAGGCCTAGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTGTACATTCCTGAAGCCTTCCCAACCTCGAAGGCCTAGCTTGG  450

seq1  TGCTATATCCAGTGCTCCCCACCCCCGTAGTCTGAATAGCACTACTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATCCAGTGCTCCCCACCCCCGTAGTCTGAATAGCACTACTTGAA  500

seq1  CATCCCACAACCTAAGCTATTGTCTACGTTGCATCCTAGCAATGCAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACAACCTAAGCTATTGTCTACGTTGCATCCTAGCAATGCAAGGT  550

seq1  AAGTCCTTATGGCCAAAGACTCCATGTACTTCAAACACAGGACCCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTATGGCCAAAGACTCCATGTACTTCAAACACAGGACCCAGAGG  600

seq1  TCCTGAGCTGGATCTGACTTTTAAGTCTCTTCCCCAGTACTAGTCTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCTGGATCTGACTTTTAAGTCTCTTCCCCAGTACTAGTCTCCAT  650

seq1  GCTACTAGATGGTTCCATTCAAACTATCAAGGGATTAAAACAACTAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTAGATGGTTCCATTCAAACTATCAAGGGATTAAAACAACTAACTT  700

seq1  GCCTATCCAGGTATAACACCTATAAACTACAATGGCCAGCAATATACTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATCCAGGTATAACACCTATAAACTACAATGGCCAGCAATATACTAT  750

seq1  AACCCTAAGGGTGCAACAGCAGTATGTATTTCTCGAGGGTAACCAACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAAGGGTGCAACAGCAGTATGTATTTCTCGAGGGTAACCAACAGC  800

seq1  TTTCTAATGAGACTTAAAGCCTGCTCAACAGAAAGAAATTGTGTCTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATGAGACTTAAAGCCTGCTCAACAGAAAGAAATTGTGTCTGGTA  850

seq1  GTGGAAACCTAACTATTCATGGCTAGTGAGGTCATTGGTCTCAGAGAAG-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGGAAACCTAACTATTCATGGCTAGTGAGGTCATTGGTCTCAGAGAAGA  900

seq1  AAACTACAGGTATCACTTTACTAAATGAAGGTAATTCCTAACTGCATTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACAGGTATCACTTTACTAAATGAAGGTAATTCCTAACTGCATTCT  950

seq1  AGGCACTTAT--CTGTATGACCACAGGTAA-GTGTAGGCCTCACCTCCTA  996
      ||||||||||   ||||||| ||||||||| |||||||||||| ||||||
seq2  AGGCACTTATTCTTGTATGA-CACAGGTAAGGTGTAGGCCTCA-CTCCTA  998

seq1  TCAAAGGAACTTCCATT  1013
      ||||| |||||||||||
seq2  TCAAA-GAACTTCCATT  1014


seq1: chr11_111532233_111532866
seq2: B6Ng01-224N13.g_71_704 (reverse)

seq1  AAACAAAAAACAAAAAACAAAAAACAAAACAAAACAAAAAACCCAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAAAAAACAAAAAACAAAACAAAACAAAAAACCCAAAAAC  50

seq1  CAGTACATCCTATTGTTAGTTCGAACCTTCACATCAACGTTCCAATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATCCTATTGTTAGTTCGAACCTTCACATCAACGTTCCAATGAAC  100

seq1  TGGAATAATTAAACTGATATTTACTTCTTTAACCTATCAGGGTATGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAATTAAACTGATATTTACTTCTTTAACCTATCAGGGTATGAGGA  150

seq1  TTCATTAAAGGTAGACTCACATAAGATGTTCCCATTCGACTCTGGAGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAAGGTAGACTCACATAAGATGTTCCCATTCGACTCTGGAGACC  200

seq1  GCCATGTGTTCTTACAAGAAGGAAAAAACATGAAAGCATCAGTGGTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGTTCTTACAAGAAGGAAAAAACATGAAAGCATCAGTGGTCCCT  250

seq1  ATATAAGGGATAAATAGTGGTTCCAAGTTCATGATGTAATTATCTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGGATAAATAGTGGTTCCAAGTTCATGATGTAATTATCTTCCCA  300

seq1  TGGCCTAAGTTCAAATACTATTGCACCAAGGGCTCTAGTTTCAACTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAAGTTCAAATACTATTGCACCAAGGGCTCTAGTTTCAACTGCTG  350

seq1  AATTTTTCAGGGAATAAATCTCCATGTTTTTTTGAAATATATTGTTACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCAGGGAATAAATCTCCATGTTTTTTTGAAATATATTGTTACTA  400

seq1  AGCCATTTTGAATTTATTTCCTTGTCGCATAGAGATCTGCCTAAAAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTTGAATTTATTTCCTTGTCGCATAGAGATCTGCCTAAAAGGAT  450

seq1  TTGCATAGCCTCATGTTATTATAGATGTTTAAGTGTCTATAAACTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAGCCTCATGTTATTATAGATGTTTAAGTGTCTATAAACTGATTT  500

seq1  TTCATTAATATAAAATATGAAAATAAGGAATAGATTTAGTGCACATTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATATAAAATATGAAAATAAGGAATAGATTTAGTGCACATTAAT  550

seq1  TACTTACAGAAATTTGGTCATAATTGATTTTTTTCATTATAACAGAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACAGAAATTTGGTCATAATTGATTTTTTTCATTATAACAGAGACT  600

seq1  GTAATATTCTGTGGAGTGATAGATGTTGGAATTC  634
      ||||||||||||||||||||||||||||||||||
seq2  GTAATATTCTGTGGAGTGATAGATGTTGGAATTC  634


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