BAC Information

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BAC

Clone NameB6Ng01-230N05
Chromosome11 (Build37)
Map Location 38,105,918 - 38,106,997
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039148, LOC276941
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230N05.bB6Ng01-230N05.g
ACCGA043588GA043589
length1,0751,170
definitionB6Ng01-230N05.b B6Ng01-230N05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagactggtaactaacctgtaatgtcaatcaattggattaa
gagatatctaaggatagagtatagcatatatcttgggaaagtgagaccat
gagagcatttccaaaaatgattagatcatacaagctgtgacataatcaat
gacttaatcctcctttgtattcataatatgctgtcagttttggaggtgtt
gaaatgtagacagtagagcctggatgggggaagcagctagctcagctgag
ggtgtcactggggagaatgccttgccctgtttttctgaatttcatgatag
gaaaaactgtattctggaacacatcatagaatgctaccactgaaaccaat
acacaacataaacccttctctaaaattgtttatgtcgaacaccatgtcat
aacagcggcaaaattaactaccacagaaaccaagcatggggcatatttgg
ggccaaggttgccaagaaggaagtactgtacagcaagaggtatacaagaa
aatggtctgttcttttacgtgaggttccatatgctgacctacaattgtca
aaaacacataaagaaggatctaaggtaaggacagaagatggagggaaaga
tatgttggcacgtagaggccatggttatttctgactcaatttgttacatt
taaaaaaaccatggccttaactctgcttgagagtttatacatttttcttt
atatagagtatagaatcccatgttaatgaatggccactattcagggtagt
gtgagattacaaaccaaaagatgagattctttaaaggaaaacaaaaagct
gcagaacctagtttagctctgaaaatataccagaaaattatttgcttagt
ggctaggtgtatagaaaccagttaactgcatttacttcttgtgagtcaaa
tatttaagtgacattgaaagtcaagcacaatagaaaatacaagatagtga
gatattgctgctttctatcaagtacaaattacggttttctgtttaataat
ttaagccattatttctttcaaatacaatatttttcatgtaaacatcattt
gtagccaagacaacgtctaacagac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacacagtcagaatggctaagatcaaaaattcaggtgacagca
catgctggcaaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggctcatacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgtcccaaccattaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcaccatcctgagtgaggtaacccaatcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccaggtatccaccccataatca
gcttccaaacactgacaccattgcatacactagcaagattttatcgaaag
gactcagatgtagctgtctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgctcacagtcagctattggatggatcacaggcccccaat
ggatgagctatagaagtacccagagctaagggatctgcaacctataggtg
acacatatgaaataccagtaccccgagctctgactctagctgcatatgta
tcaaagatggctagtgcatcacttgagagaggtccactgaaccgcactta
attgcccagtacggagcagtcaacgtggaataggctgcggtcggcgactt
cctcgtctactctacttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38105918_38106997
seq2: B6Ng01-230N05.b_49_1123 (reverse)

seq1  GTCTGTTAGACGTTGTCTTGGCTACAAATGATTGTTTTTACATG-AAAAT  49
      |||||||||||||||||||||||||||||||   | |||||||| |||||
seq2  GTCTGTTAGACGTTGTCTTGGCTACAAATGA---TGTTTACATGAAAAAT  47

seq1  ATTGTATTTTGAAAAGAAATAATGGC-TAAATTATTAAACAGAAAACCGT  98
      |||||||||   |||||||||||||| |||||||||||||||||||||||
seq2  ATTGTATTT--GAAAGAAATAATGGCTTAAATTATTAAACAGAAAACCGT  95

seq1  AATTTGTACTTTGATAGAAAGCAGCAATATCTCACTATCTTGTATTTTCT  148
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAC-TTGATAGAAAGCAGCAATATCTCACTATCTTGTATTTTCT  144

seq1  ATTTGTGCTTGACTTTCAATGTCACTTAAATATTTGACTCACAAAGAAGT  198
      | |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  A-TTGTGCTTGACTTTCAATGTCACTTAAATATTTGACTCAC-AAGAAGT  192

seq1  AAATGCAGTTAACTGGTTTCTATACACCTAGCCACTAAGCAAATAATTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTTAACTGGTTTCTATACACCTAGCCACTAAGCAAATAATTTT  242

seq1  CTGGTATATTTTCAGAGCTAAACTAGGTTCTGCAGCTTTTTGTTTTCC-T  297
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGGTATATTTTCAGAGCTAAACTAGGTTCTGCAGCTTTTTGTTTTCCTT  292

seq1  TAAAGAATCTCATCTTTTGGTTTGTAATCTCACACTACCCTGAATAGTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATCTCATCTTTTGGTTTGTAATCTCACACTACCCTGAATAGTGG  342

seq1  CCATTCATTAACATGGGATTCTATACTCTATATAAAGAAAAATGTATAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCATTAACATGGGATTCTATACTCTATATAAAGAAAAATGTATAAA  392

seq1  CTCTCAAGCAGAGTTAAGGCCATGGTTTTTTTAAATGTAACAAATTGAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGCAGAGTTAAGGCCATGGTTTTTTTAAATGTAACAAATTGAGT  442

seq1  CAGAAATAACCATGGCCTCTACGTGCCAACATATCTTTCCCTCCATCTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAACCATGGCCTCTACGTGCCAACATATCTTTCCCTCCATCTTC  492

seq1  TGTCCTTACCTTAGATCCTTCTTTATGTGTTTTTGACAATTGTAGGTCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTACCTTAGATCCTTCTTTATGTGTTTTTGACAATTGTAGGTCAG  542

seq1  CATATGGAACCTCACGTAAAAGAACAGACCATTTTCTTGTATACCTCTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGAACCTCACGTAAAAGAACAGACCATTTTCTTGTATACCTCTTG  592

seq1  CTGTACAGTACTTCCTTCTTGGCAACCTTGGCCCCAAATATGCCCCATGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGTACTTCCTTCTTGGCAACCTTGGCCCCAAATATGCCCCATGC  642

seq1  TTGGTTTCTGTGGTAGTTAATTTTGCCGCTGTTATGACATGGTGTTCGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCTGTGGTAGTTAATTTTGCCGCTGTTATGACATGGTGTTCGAC  692

seq1  ATAAACAATTTTAGAGAAGGGTTTATGTTGTGTATTGGTTTCAGTGGTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAATTTTAGAGAAGGGTTTATGTTGTGTATTGGTTTCAGTGGTAG  742

seq1  CATTCTATGATGTGTTCCAGAATACAGTTTTTCCTATCATGAAATTCAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATGATGTGTTCCAGAATACAGTTTTTCCTATCATGAAATTCAGA  792

seq1  AAAACAGGGCAAGGCATTCTCCCCAGTGACACCCTCAGCTGAGCTAGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGGCAAGGCATTCTCCCCAGTGACACCCTCAGCTGAGCTAGCTG  842

seq1  CTTCCCCCATCCAGGCTCTACTGTCTACATTTCAACACCTCCAAAACTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCCATCCAGGCTCTACTGTCTACATTTCAACACCTCCAAAACTGA  892

seq1  CAGCATATTATGAATACAAAGGAGGATTAAGTCATTGATTATGTCACAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATATTATGAATACAAAGGAGGATTAAGTCATTGATTATGTCACAGC  942

seq1  TTGTATGATCTAATCATTTTTGGAAATGCTCTCATGGTCTCACTTTCCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGATCTAATCATTTTTGGAAATGCTCTCATGGTCTCACTTTCCCA  992

seq1  AGATATATGCTATACTCTATCCTTAGATATCTCTTAATCCAATTGATTGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATGCTATACTCTATCCTTAGATATCTCTTAATCCAATTGATTGA  1042

seq1  CATTACAGGTTAGTTACCAGTCTTCTTGAATTC  1080
      |||||||||||||||||||||||||||||||||
seq2  CATTACAGGTTAGTTACCAGTCTTCTTGAATTC  1075