BAC Information

Click to search

BAC

Clone NameB6Ng01-230P18
Chromosome11 (Build37)
Map Location 73,272,825 - 73,273,531
singlet/doubletsinglet
Overlap genenone
Upstream gene9830002I17Rik, LOC432577, Ube2g1, Ankfy1, Cyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380
Downstream geneOlfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230P18.bB6Ng01-230P18.g
ACCGA043705GA043706
length7321,012
definitionB6Ng01-230P18.b B6Ng01-230P18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcttgatatttataattattgtatcaattttgaagaagaag
actgtataagttactcttttctgagatgaatgcttttcaaaatcatcata
gctaatgaaccagaatcttaccctcacctaatgtctgtgccaccctccaa
gtagaaccattgttcactgaaacagtctcttcatggagaggccatcttaa
tacacacaccttttcttttcttttcttttcttttcttttctttttttttc
ttttctttcctttcctttcttttcctttccttttcctttcctttcctttc
cctttccctccccttcccttccctccccttccctcccctttttcttttct
tttcttttcttttcttttcttttcttttcttttcttttcttttcttttct
ttcctttcctttcctttcctttcctttcctttcctttcctttcccttccc
tttcctttcccttcccttccctttccccttccctcccccttttcttttct
tttcttttcccttcccttccatcccctccccttccctccctttcttttct
tttcttttcttttcttttcctttcctttcctttcctttcctttcctttcc
tttcctttcctttcctttcctttccttttcttttcccttccctcccctcc
cctccccttcctttcatttcttttctttcttttcttttcttttcttttct
tttctttcctttcctttcctttcctttccttt
gaattctcatctgaagaataccgaatgacagagaagcacctgaaaaaatg
ttcaacatccttaaccatcagggaaatgcaaatcaaaaaaaccttgagat
tccacctcacacccagtcagaatggctaagatcaaaaactcaggtgacag
cagatgctggcgaggatgtggagaaagagaaacactcctccatttctggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcagttcttc
agaaaattggacatggtactactggaggatcccacaatacctctcctggg
catatatccagaagatgtctcaaccggtaagaaggacgcatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggta
aatggatggacctggagggcatcatcctgagtgacgtaacccaatcacaa
aggaactcatacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctaaacgcatgaaactca
agaagaacgaagaccaaaatgtggacactttgccccttcttagaattggg
aacaaaacacccattgaaggagttacagagacaaagtttgaagcagtgaa
gaaaggatggaccatctagagacaatatgaaaggggttatatgatggcta
tgaaataaatactatcacagaatgatgaagaaaaaaaagagatgaatcat
acctgaaaacctatctttcataaaacagaaattccaattgattgcaagac
actggattattttcctgaatgtatccaacactgatgaatctgagtcatag
ttctggttcaatgctcctgaatcacttttaatttattgcaagaacaaaaa
aaaatagctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73272825_73273531
seq2: B6Ng01-230P18.b_49_639

seq1  GAATTCTTTGCTTGATATTTATAATTATTGTATCAATTTTGAAGAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTGATATTTATAATTATTGTATCAATTTTGAAGAAGAAG  50

seq1  ACTGTATAAGTTACTCTTTTCTGAGATGAATGCTTTTCAAAATCATCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATAAGTTACTCTTTTCTGAGATGAATGCTTTTCAAAATCATCATA  100

seq1  GCTAATGAACCAGAATCTTACCCTCACCTAATGTCTGTGCCACCCTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGAACCAGAATCTTACCCTCACCTAATGTCTGTGCCACCCTCCAA  150

seq1  GTAGAACCATTGTTCACTGAAACAGTCTCTTCATGGAGAGGCCATCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACCATTGTTCACTGAAACAGTCTCTTCATGGAGAGGCCATCTTAA  200

seq1  TACACACACCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTC  250

seq1  TTTTCTTTCCTTTCCTTTCTTTTCCTTTCCTTTTCCTTTCCTTTCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCTTTCCTTTCTTTTCCTTTCCTTTTCCTTTCCTTTCCTTTC  300

seq1  CCTTTCCCTCCCCTTCCCTTCCCTCCCCTTCCCTCCCCTTTTTCTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCTCCCCTTCCCTTCCCTCCCCTTCCCTCCCCTTTTTCTTTTCT  350

seq1  TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  400

seq1  TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCC  450
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCCTTCCC  450

seq1  TTTCCTTTCCTTTCCCTTCCCTTCCCCCTTCCCTCCCCTTCTTCTTTTCT  500
      |||||||||| |||||||||||| |||||||||||||| | |||||||||
seq2  TTTCCTTTCCCTTCCCTTCCCTTTCCCCTTCCCTCCCCCTTTTCTTTTCT  500

seq1  TTTCTTTTCTTTTCCCTTCCATCTCCTCCCCTTCCCTCCCCTTCTTTTCT  550
      |||||||||  |||||||||||| |||||||||||||||| |||||||||
seq2  TTTCTTTTCCCTTCCCTTCCATCCCCTCCCCTTCCCTCCCTTTCTTTTCT  550

seq1  TTTCTTTTCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC  600
      ||||||||||||||||||| |||||||||||||||||||||         
seq2  TTTCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTCCTTTCCT---------  591

seq1  TTTCCTTTCCTTTCCTTTCCTTTTCTTTTCCCTTCCCTCTCCTCCCCTTC  650
                                                        
seq2  --------------------------------------------------  591

seq1  CCTCCCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC  700
                                                        
seq2  --------------------------------------------------  591

seq1  TTTTCCT  707
             
seq2  -------  591