BAC Information

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BAC

Clone NameB6Ng01-234G10
Chromosome11 (Build37)
Map Location 58,147,917 - 58,148,677
singlet/doubletsinglet
Overlap geneSh3bp5l
Upstream geneLOC667878, 1810073G14Rik, Mfap3, Galnt10, Sap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik
Downstream gene2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik, Olfr313, Olfr312, GA_x5J8B7W3UM0-1747565-1747342, Olfr311, 2810021J22Rik, Zfp39, Butr1, Rnf187, LOC676691, Hist3h2ba, Hist3h2bb, Hist3h2a, LOC382523, Trim17, Trim11, Obscn, A230051G13Rik, 4930543L23Rik, Gja12, Guk1, Mrpl55, 2310033P09Rik, Arf1, Wnt3a, Wnt9a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234G10.bB6Ng01-234G10.g
ACCGA046177GA046178
length7611,164
definitionB6Ng01-234G10.b B6Ng01-234G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcatatcctccagcttttggaaagagggtgttggtcaaacggt
ttggtggtgctaggatgggcctggcctctcaggttttctatgttctccac
cccctttttcttttttgtgagacagtgtttcatgtagtctagggtggtct
tgagctcactgtatagctcatgctgattttgaactcctgatccttttgtc
tctgcatcccgagtctgaaattataggtctgtgctgccaggatacctgga
cacacttgtttaactcccaattcttcagggtgacgttgcagcctcagagt
tctcatcttcaggtgttggcataactaaaacaacagtcatcaccctggcc
ctgttgactcatcatctgcttgggcctttcgatgctttgtcaaagaggac
caggagcgtccaagagtggaacagaaacatttgtagtcaagcacccatgc
tttgactcagtggcctggcattctgggaatgtgtccagagtgccccaaga
aggtcatcctcctgctggctgctggctttctgacagacgatgcatgctga
ctcagaccttgtcctccttgaattccattttcaatgagtgccaggagttc
ctagtggagcaggccaaatggaatgtgttgctgactgtccacacagtact
ttgggtgctcagtgactcccactgtgccctctctgccttggtgcttcagc
ttggctgcttcttcctgcttcccttgttcatcaggctttgggggtgtgag
gggtgtgggag
gaattcctggtttgattcaaatgattttttttaaaagaatgttttaagaa
atgtttttagttgttttactagaaagctgtaataaggttagaatcaagaa
tagaatgtgcccactcctcagaatagtaagtaaagactgtgtaataagaa
atacaatgagctttcataattccactaaaaagagatatagagcttgggac
aaatttgtgttcaaggaaaaacattcaggtccaaggatgaagccactgtg
tgcactgtgatacggctaggccatgtaaaaaatggtgctttgccgctgac
aatgagcttacagcatgaaacactgctttcagcttgttattgataccttt
cgataactcttctcttttgaaacgttttatctaagaggtaattcttcctt
acatagagaactttttgtctaagaactataaaaagctgaaagcaataaag
aaggtggtgtagccgtttctgtgttgtctaagggacttctttcctttgct
tccttttctctcaagttcagaaagagctaatgagctcccagcctcttatc
cggccagtcaggggctcctgtctgactcagaggagcacaagcaataaatc
cttacctaatttcccgctcctgaacagcatatgttcgtcacaagaaacca
gagcttaattaagcacaaataagaagagagttacagagtaaaacattagc
ccttatttaagcacagagttaaatttccagcacttatttaagcacagaac
agtaagaaagcgttaagttttcaatgtttaataaatcacagagagttata
aaataaagatacagtgcttactaaggcacagagagctaaagagcaaagaa
gccagcgggttttcagccacagaaaaagcaagagagtgttaagtttccag
aagctctcagcttctagcccccacacagttagagagagttacaaggctgg
aggtcatcataagccttctgtccttcgtccatgctgtgttctgcctcagc
tctgaaccccagaggcagggaaagccctggcaggacctttataacaaatt
atatatttttctctataaaaaacattgctttctaattagagccacacagt
aactgaacgcttggcatagctgctgccatgcagcagtggttaagacatct
ggttctggaaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_58147917_58148677
seq2: B6Ng01-234G10.b_44_804

seq1  GAATTCCTCATATCCTCCAGCTTTTGGAAAGAGGGTGTTGGTCAAACGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATATCCTCCAGCTTTTGGAAAGAGGGTGTTGGTCAAACGGT  50

seq1  TTGGTGGTGCTAGGATGGGCCTGGCCTCTCAGGTTTTCTATGTTCTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTGCTAGGATGGGCCTGGCCTCTCAGGTTTTCTATGTTCTCCAC  100

seq1  CCCCTTTTTCTTTTTTGTGAGACAGTGTTTCATGTAGTCTAGGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTTCTTTTTTGTGAGACAGTGTTTCATGTAGTCTAGGGTGGTCT  150

seq1  TGAGCTCACTGTATAGCTCATGCTGATTTTGAACTCCTGATCCTTTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCACTGTATAGCTCATGCTGATTTTGAACTCCTGATCCTTTTGTC  200

seq1  TCTGCATCCCGAGTCTGAAATTATAGGTCTGTGCTGCCAGGATACCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATCCCGAGTCTGAAATTATAGGTCTGTGCTGCCAGGATACCTGGA  250

seq1  CACACTTGTTTAACTCCCAATTCTTCAGGGTGACGTTGCAGCCTCAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGTTTAACTCCCAATTCTTCAGGGTGACGTTGCAGCCTCAGAGT  300

seq1  TCTCATCTTCAGGTGTTGGCATAACTAAAACAACAGTCATCACCCTGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTTCAGGTGTTGGCATAACTAAAACAACAGTCATCACCCTGGCC  350

seq1  CTGTTGACTCATCATCTGCTTGGGCCTTTCGATGCTTTGTCAAAGAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGACTCATCATCTGCTTGGGCCTTTCGATGCTTTGTCAAAGAGGAC  400

seq1  CAGGAGCGTCCAAGAGTGGAACAGAAACATTTGTAGTCAAGCACCCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCGTCCAAGAGTGGAACAGAAACATTTGTAGTCAAGCACCCATGC  450

seq1  TTTGACTCAGTGGCCTGGCATTCTGGGAATGTGTCCAGAGTGCCCCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCAGTGGCCTGGCATTCTGGGAATGTGTCCAGAGTGCCCCAAGA  500

seq1  AGGTCATCCTCCTGCTGGCTGCTGGCTTTCTGACAGACGATGCATGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATCCTCCTGCTGGCTGCTGGCTTTCTGACAGACGATGCATGCTGA  550

seq1  CTCAGACCTTGTCCTCCTTGAATTCCATTTTCAATGAGTGCCAGGAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACCTTGTCCTCCTTGAATTCCATTTTCAATGAGTGCCAGGAGTTC  600

seq1  CTAGTGGAGCAGGCCAAATGGAATGTGTTGCTGACTGTCCACACAGTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGAGCAGGCCAAATGGAATGTGTTGCTGACTGTCCACACAGTACT  650

seq1  TTGGGTGCTCAGTGACTCCCACTGTGCCCTCTCTGCCTTGGTGCTTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGCTCAGTGACTCCCACTGTGCCCTCTCTGCCTTGGTGCTTCAGC  700

seq1  TTGGCTGCTTCTTCCTGCTTCCCTTGTTCATCAGGCTTTGGGGGTGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGCTTCTTCCTGCTTCCCTTGTTCATCAGGCTTTGGGGGTGTGAG  750

seq1  GGGTGTGGGAG  761
      |||||||||||
seq2  GGGTGTGGGAG  761