BAC Information

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BAC

Clone NameB6Ng01-240J14
Chromosome11 (Build37)
Map Location 42,923,943 - 43,115,023
singlet/doubletdoublet
Overlap geneAtp10b
Upstream geneGabra1, Gabra6, Gabrb2
Downstream geneEG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240J14.bB6Ng01-240J14.g
ACCGA050728GA050729
length795569
definitionB6Ng01-240J14.b B6Ng01-240J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,114,234 - 43,115,023)(42,923,943 - 42,924,511)
sequence
gaattcctttccaattcctttttattttcctgtattagttggtaaacata
cttttatagaatcgttccttcctcagctaatgctttgtagttgatttaag
aagaaataaaagtttaacaagacctttaaacttttattgcttgattttaa
attttattttcttggtttttatgttggaagggatgatagacatcatctca
tctaatccttcaagggcttcatctggtatgggccaaagttccaaggagga
gaagtcctgcctaaggccctacaacttcaccctcatagatcttagcttga
aaaagacatttcatatctggacaggagttgagaaccacacagacgtgtca
tggaaaggttcaagcaagcagatcagggtagtggtaagggtagagttctg
tgctccaactagagtagtgttaagggaaatgggtactccaactagggtgg
tgttaagggaggtggtatgtactccaactagggtggtgttaagggaggtg
ctatgtactccaactagggtctatctggaagaaggaaaggatgaagccta
gtgatagccaaagggaggatttgggtcccaggaagagatttcccacagtt
ctgacaacttgtcaagccactttacagaagagactagaactaagacaggt
caatgatgggcagaaccacaccttgaccagtacttcaaagccttgaatac
ctcttttccaatatttaaaggtaaaatcttatatcagtatgggaaagatg
gtcttggggaaggttccctgggaccattctcgtttttactctctt
gaattcacatgtctaagtgaatgtctaagtatttcttttttttttttttt
ttttcttagtagtagtaacaagaccacacatcttatggctttggtggctc
tctgaaactttggaagaaaacataattccaacactctgtatcctttatgg
ctgcaaagccattaccgtgtgcccacgttccactgccagttcaggatgga
cctcagtctcctggaatcatattcatggcttttgtgtgcagttgcctttt
aggagcagaaaacctcttgaacctttcacaagctgcaaagttagctaggt
gacaacttgctgcagaggtgctttccccattgttctggtatagagtaaaa
agtctctacttaatggaactaatgccccttaacaattgcagtctcgtttt
cgtttttctcttttccgagacagggtttctctgtgtagccctggctgttc
tggaacttacttttagatcaggctggccttgaactcagaaatctgcctgc
ctctgcctcccgagtgctgggattaaaggcgtgctgagggggtctgcaac
cctataggtggaacaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_43114234_43115023
seq2: B6Ng01-240J14.b_47_841 (reverse)

seq1  AAGAG-GTAAAAACGAG-ATGGT-CCAGGG-ACCTTCCCCAAGACCATCT  46
      ||||| ||||||||||| ||||| |||||| |||||||||||||||||||
seq2  AAGAGAGTAAAAACGAGAATGGTCCCAGGGAACCTTCCCCAAGACCATCT  50

seq1  TTCCCATACTGATATAAGA-TTTACCTTTAAATATTGGAAAAGAGGTATT  95
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCCCATACTGATATAAGATTTTACCTTTAAATATTGGAAAAGAGGTATT  100

seq1  CAAGGCTTTGAAGTACTGGTCAAGGTGTGGTTCTGCCCATCATTGACCTG  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTTGAAGTACTGGTCAAGGTGTGGTTCTGCCCATCATTGACCTG  150

seq1  TCTTAGTTCTAGTCTCTTCTGTAAAGTGGCTTGACAAGTTGTCAGAACTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTCTAGTCTCTTCTGTAAAGTGGCTTGACAAGTTGTCAGAACTG  200

seq1  TGGGAAATCTCTTCCTGGGACCCAAATCCTCCCTTTGGCTATCACTAGGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATCTCTTCCTGGGACCCAAATCCTCCCTTTGGCTATCACTAGGC  250

seq1  TTCATCCTTTCCTTCTTCCAGATAGACCCTAGTTGGAGTACATAGCACCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTTTCCTTCTTCCAGATAGACCCTAGTTGGAGTACATAGCACCT  300

seq1  CCCTTAACACCACCCTAGTTGGAGTACATACCACCTCCCTTAACACCACC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAACACCACCCTAGTTGGAGTACATACCACCTCCCTTAACACCACC  350

seq1  CTAGTTGGAGTACCCATTTCCCTTAACACTACTCTAGTTGGAGCACAGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGGAGTACCCATTTCCCTTAACACTACTCTAGTTGGAGCACAGAA  400

seq1  CTCTACCCTTACCACTACCCTGATCTGCTTGCTTGAACCTTTCCATGACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCCTTACCACTACCCTGATCTGCTTGCTTGAACCTTTCCATGACA  450

seq1  CGTCTGTGTGGTTCTCAACTCCTGTCCAGATATGAAATGTCTTTTTCAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGTGTGGTTCTCAACTCCTGTCCAGATATGAAATGTCTTTTTCAAG  500

seq1  CTAAGATCTATGAGGGTGAAGTTGTAGGGCCTTAGGCAGGACTTCTCCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATCTATGAGGGTGAAGTTGTAGGGCCTTAGGCAGGACTTCTCCTC  550

seq1  CTTGGAACTTTGGCCCATACCAGATGAAGCCCTTGAAGGATTAGATGAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAACTTTGGCCCATACCAGATGAAGCCCTTGAAGGATTAGATGAGA  600

seq1  TGATGTCTATCATCCCTTCCAACATAAAAACCAAGAAAATAAAATTTAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTATCATCCCTTCCAACATAAAAACCAAGAAAATAAAATTTAAA  650

seq1  ATCAAGCAATAAAAGTTTAAAGGTCTTGTTAAACTTTTATTTCTTCTTAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCAATAAAAGTTTAAAGGTCTTGTTAAACTTTTATTTCTTCTTAA  700

seq1  ATCAACTACAAAGCATTAGCTGAGGAAGGAACGATTCTATAAAAGTATGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTACAAAGCATTAGCTGAGGAAGGAACGATTCTATAAAAGTATGT  750

seq1  TTACCAACTAATACAGGAAAATAAAAAGGAATTGGAAAGGAATTC  790
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAACTAATACAGGAAAATAAAAAGGAATTGGAAAGGAATTC  795

seq1: chr11_42923943_42924511
seq2: B6Ng01-240J14.g_67_635

seq1  GAATTCACATGTCTAAGTGAATGTCTAAGTATTTCTTTTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGTCTAAGTGAATGTCTAAGTATTTCTTTTTTTTTTTTTTT  50

seq1  TTTTCTTAGTAGTAGTAACAAGACCACACATCTTATGGCTTTGGTGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGTAGTAGTAACAAGACCACACATCTTATGGCTTTGGTGGCTC  100

seq1  TCTGAAACTTTGGAAGAAAACATAATTCCAACACTCTGTATCCTTTATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACTTTGGAAGAAAACATAATTCCAACACTCTGTATCCTTTATGG  150

seq1  CTGCAAAGCCATTACCGTGTGCCCACGTTCCACTGCCAGTTCAGGATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGCCATTACCGTGTGCCCACGTTCCACTGCCAGTTCAGGATGGA  200

seq1  CCTCAGTCTCCTGGAATCATATTCATGGCTTTTGTGTGCAGTTGCCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTCTCCTGGAATCATATTCATGGCTTTTGTGTGCAGTTGCCTTTT  250

seq1  AGGAGCAGAAAACCTCTTGAACCTTTCACAAGCTGCAAAGTTAGCTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGAAAACCTCTTGAACCTTTCACAAGCTGCAAAGTTAGCTAGGT  300

seq1  GACAACTTGCTGCAGAGGTGCTTTCCCCATTGTTCTGGTATAGAGTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTGCTGCAGAGGTGCTTTCCCCATTGTTCTGGTATAGAGTAAAA  350

seq1  AGTCTCTACTTAATGGAACTAATGCCCCTTAACAATTGCAGTCTCGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTACTTAATGGAACTAATGCCCCTTAACAATTGCAGTCTCGTTTT  400

seq1  CGTTTTTCTCTTTTCCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTCTCTTTTCCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTTC  450

seq1  TGGAACTTACTTTTAGATCAGGCTGGCCTTGAACTCAGAAATCTGCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTACTTTTAGATCAGGCTGGCCTTGAACTCAGAAATCTGCCTGC  500

seq1  CTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCTGAGGGGGTCTGCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCTGAGGGGGTCTGCAAC  550

seq1  CCTATAGGTGGAACAACAA  569
      |||||||||||||||||||
seq2  CCTATAGGTGGAACAACAA  569