BAC Information

Click to search

BAC

Clone NameB6Ng01-241M08
Chromosome11 (Build37)
Map Location 7,452,836 - 7,453,989
singlet/doubletsinglet
Overlap genenone
Upstream geneCcm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241M08.bB6Ng01-241M08.g
ACCGA051601GA051602
length1,154771
definitionB6Ng01-241M08.b B6Ng01-241M08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcatgaaacaggtgaatggttgaacagaaatcacatgatctc
tatcttcttgtgatttttacacacgtgttgtggacttacttcctctgtgc
ttgaaaggtatcctatcctgagttacatgtattcatgtggcaatatcact
ttaagacatggagtctctgaacacttagttcctttctatgggaaaaagtt
tattcagatgcattttctcttacagtttcatgattagtccttccaatttg
caatcttccatccactgagagttttgtacgtagtggaatgttgaaataaa
taggttaatattgcagaggcaagttgccttcccagtgcattggtaccgta
gccctgttaatgagtgttcacccttcctgcataccagcaccctgatccac
ccctcacctcctgcactggcctcccaaatgtccttcctgctccgttcctg
ttcccccagcaaatcccacacccaaaccacagacgcacactaaacagaac
tcagacttgacggctccgtgagaaccgcactgtttgacttctcacactga
aagaaacaatttccccaatcctgctcacaagacactctgagatgagggca
cctacgggaattccttcccaaggccaccctggttccctcgccacacacct
gtgctgccgtggtgccaacctcaggccttcgccaagagccagcatcccac
actgctctcacccggaaggctggctgcttcagagggcttccaaatccttt
aggtttctttcctattacacacattcacacacatacacttgcacatacac
tccctctcatatgcatacattcacgtactcacacatatactcatgcatat
gtgtatggaatatgtgcatgcatgcacacatttgggcttctacataggaa
aacatatgtgtctgtgcatttattcttatctagctccactttactgtaca
cagtgattaaccacagtagcttcaggattatttttccccaagtctcccag
catgactacaaccatcaactgcaatgacaatgggtttttattttcttctt
ccataagtagatgggatttgtttatgctgctgtgttgattcattctaaga
cctttcagaagtgaatgttgggccaattactgacagaaaatactggcaca
tggg
gaattcaaggaactaaacatcagaaaatccaataacccgattaaaaatga
ggtacagatctaaacagaattctcagcaatagagcatctaatggcctaga
agcacttaaagaaatgttcaacatccttatcatcaggaaaatgcaaatca
aaacaactccaagattctatcttatacccttcagaatggctaagatcaaa
aacccaagtgacagctcatgctgtcaagtatgtggagccaggggaaaacc
cctctatttctggtgggaatacaaccttgtacaaccactttagaaataaa
tttggcagtttctcagaaaattgagaggagatatatttcaagacccagct
atacgactcctgggcatatacccaaaagatgctccagcataccacaagga
cacttgctcagctgtgttcaaagcacctttattggtaatagacaggaact
ggaaacaacctagatgtcactcaactgaagaatggataaagaaaatgttg
tacatttacacaatggagcactactcagccattgaaaacaatgagatcat
gtaattttcaggcaaatggacagagctagaaaatatcatcctgagtggag
taatccagacccagaaaaacaaatatggtatgtattcttttataagtgga
tattagtcataaaacacaggataatcacactacaaaacaaagatccaaag
aagctaattaacaaggagggctcacttagaaggggaaatggattagatat
tgggggtagatgggaaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7452836_7453989
seq2: B6Ng01-241M08.b_45_1198 (reverse)

seq1  CCCATGTGCCAGTTATTTTCTGTCAGTAA-TGTGCCAACA-TCAC-TCTG  47
      |||||||||||| |||||||||||||||| ||  |||||| |||| ||||
seq2  CCCATGTGCCAG-TATTTTCTGTCAGTAATTGGCCCAACATTCACTTCTG  49

seq1  AAAAGTCTAGGAAATGAAATCAAACACAGCAGCAATAAACAAAT-CCATC  96
      ||| ||||  | |||| |||| ||||||||||| |||||||||| |||||
seq2  AAAGGTCTTAG-AATG-AATC-AACACAGCAGC-ATAAACAAATCCCATC  95

seq1  TAATTATGGGAAAGAAAGAAAATAAAA--CCATTGTCATTTGCAGTTGAT  144
      || ||||||  ||| ||||||||||||  ||||||||| |||||||||||
seq2  TACTTATGG--AAG-AAGAAAATAAAAACCCATTGTCA-TTGCAGTTGAT  141

seq1  GG-TGTAGTCATGCTGGAAGACTTGGGG-AAAATAATCCTGAAGCTACTG  192
      || |||||||||||||| |||||||||| |||||||||||||||||||||
seq2  GGTTGTAGTCATGCTGGGAGACTTGGGGAAAAATAATCCTGAAGCTACTG  191

seq1  TGGTTAATCACTGTGTACAGTAAAGTGGAGCTAGATAAGAATAAATGCAC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATCACTGTGTACAGTAAAGTGGAGCTAGATAAGAATAAATGCAC  241

seq1  AGACACATATG-TTTCCTATGTAGAAGCCCAAATGTGTGCATGCATGCAC  291
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGACACATATGTTTTCCTATGTAGAAGCCCAAATGTGTGCATGCATGCAC  291

seq1  ATATTCCATACACATATGCATGAGTATATGTGTGAGTACGTGAATGTATG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATACACATATGCATGAGTATATGTGTGAGTACGTGAATGTATG  341

seq1  CATATGAGAGGGAGTGTATGTGCAAGTGTATGTGTGTGAATGTGTGTAAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAGAGGGAGTGTATGTGCAAGTGTATGTGTGTGAATGTGTGTAAT  391

seq1  AGGAAAGAAACCTAAAGGATTTGGAAGCCCTCTGAAGCAGCCAGCCTTCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAACCTAAAGGATTTGGAAGCCCTCTGAAGCAGCCAGCCTTCC  441

seq1  GGGTGAGAGCAGTGTGGGATGCTGGCTCTTGGCGAAGGCCTGAGGTTGGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGAGCAGTGTGGGATGCTGGCTCTTGGCGAAGGCCTGAGGTTGGC  491

seq1  ACCACGGCAGCACAGGTGTGTGGCGAGGGAACCAGGGTGGCCTTGGGAAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGCAGCACAGGTGTGTGGCGAGGGAACCAGGGTGGCCTTGGGAAG  541

seq1  GAATTCCCGTAGGTGCCCTCATCTCAGAGTGTCTTGTGAGCAGGATTGGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGTAGGTGCCCTCATCTCAGAGTGTCTTGTGAGCAGGATTGGG  591

seq1  GAAATTGTTTCTTTCAGTGTGAGAAGTCAAACAGTGCGGTTCTCACGGAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGTTTCTTTCAGTGTGAGAAGTCAAACAGTGCGGTTCTCACGGAG  641

seq1  CCGTCAAGTCTGAGTTCTGTTTAGTGTGCGTCTGTGGTTTGGGTGTGGGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCAAGTCTGAGTTCTGTTTAGTGTGCGTCTGTGGTTTGGGTGTGGGA  691

seq1  TTTGCTGGGGGAACAGGAACGGAGCAGGAAGGACATTTGGGAGGCCAGTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGGGGAACAGGAACGGAGCAGGAAGGACATTTGGGAGGCCAGTG  741

seq1  CAGGAGGTGAGGGGTGGATCAGGGTGCTGGTATGCAGGAAGGGTGAACAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGTGAGGGGTGGATCAGGGTGCTGGTATGCAGGAAGGGTGAACAC  791

seq1  TCATTAACAGGGCTACGGTACCAATGCACTGGGAAGGCAACTTGCCTCTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAACAGGGCTACGGTACCAATGCACTGGGAAGGCAACTTGCCTCTG  841

seq1  CAATATTAACCTATTTATTTCAACATTCCACTACGTACAAAACTCTCAGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTAACCTATTTATTTCAACATTCCACTACGTACAAAACTCTCAGT  891

seq1  GGATGGAAGATTGCAAATTGGAAGGACTAATCATGAAACTGTAAGAGAAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAAGATTGCAAATTGGAAGGACTAATCATGAAACTGTAAGAGAAA  941

seq1  ATGCATCTGAATAAACTTTTTCCCATAGAAAGGAACTAAGTGTTCAGAGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCTGAATAAACTTTTTCCCATAGAAAGGAACTAAGTGTTCAGAGA  991

seq1  CTCCATGTCTTAAAGTGATATTGCCACATGAATACATGTAACTCAGGATA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTCTTAAAGTGATATTGCCACATGAATACATGTAACTCAGGATA  1041

seq1  GGATACCTTTCAAGCACAGAGGAAGTAAGTCCACAACACGTGTGTAAAAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCTTTCAAGCACAGAGGAAGTAAGTCCACAACACGTGTGTAAAAA  1091

seq1  TCACAAGAAGATAGAGATCATGTGATTTCTGTTCAACCATTCACCTGTTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAAGATAGAGATCATGTGATTTCTGTTCAACCATTCACCTGTTT  1141

seq1  CATGACAGAATTC  1154
      |||||||||||||
seq2  CATGACAGAATTC  1154