BAC Information

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BAC

Clone NameB6Ng01-247M10
Chromosome11 (Build37)
Map Location 120,030,343 - 120,031,343
singlet/doubletsinglet
Overlap genenone
Upstream geneTbc1d16, Ccdc40, Gaa, Eif4a3, Card14, Sgsh, Slc26a11, LOC672511, Rnf213, A730011L01Rik, Nptx1, 4932417H02Rik, Chmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik
Downstream gene2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247M10.bB6Ng01-247M10.g
ACCGA056023GA056024
length9951,013
definitionB6Ng01-247M10.b B6Ng01-247M10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagattgccctgaatttcatctagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacatta
gaaaaaattcaaggccaaacattttccactttacttctgatagactgtct
tgaatttccttagaaagttcaaggccaggcttacctcgtaaagctatact
cactggtactctcgttccccagctgaaaagttctgaattcatgcagttga
atccttctcaacagtctgtgttgtgggaacacttcataaccgtgacccgc
agttctggttccggaatgagggatcttccttgcaccggtgatggtaaact
ctcgtcccgagttttttctcgtcccggaattcggcaccaattcttattaa
acgcgttctcacgcccggccaggaagaacacagcaaaccagaatcttctg
cggcaaaactttattgcttacatcttcaggagcaagagtgtaagaagcaa
gagagcgagaaaacgaaacctcgtccctcttaaggagaattatcctttcg
cctaggacgtgtcactccctgattggctgcagcccatcggccgagttgac
gtcacggggaaaggcagagcacatggagtggagaaccaccctcggcacat
gcgcagattatttgtttaccacttagaacacagctgtcagcgccatcttg
taaccggccgaatgtgggcccggctcccactagaggaaacatgca
gaattcttaccagctaggcatgccggttcttctgtctggtttgtgcggcc
ctagcagtctcagctccttagaggagcacctttaagggcccccacctgtc
tcccaacatcgtttcaaatttgtctggggatcagactggagcctgtacta
acaggatttgggtgacactaaaccataggggccacactcagaaccactgc
gccaggccaaatcctcggtgtaggcagtcactgtgggcagcgggcctcac
ctatgccgggaggaggaggaggagggtgcgtccttaggcacgaccccccg
aaacctaacaccccgctaggcagaaaaggaggcaggcaatgaactcaggt
aatggagagtcaagggctccgagctaagtgaccttatctcggcagccccc
caaacttggacccacccgccaatggtgccctctgctggccatcccagtct
ctgacaggaaggctaattggctcaggaatcaagcatagtcggttctgatt
ggtcacactgggccggtgggctaggatactgtgattgacagccagatcag
gaagcagtcagtcggaaaagctgtctgggcaccttgtttggatcaagctc
ttcatacaaacaagaaaaagcctttctccttcccacccgtacagcgtggc
tccatccctgtataatcacagaagtggagttacttctgacccagaagcct
ccacgcatgctctgactatgttagagtgtgaggagagccacagtcattct
aagaaagctggttgtcagtcctgagtgttcagtcctgagtgtcaggttga
tcgacctcttctgaggagagtgctttgcagctgagctgggttacacctct
gcttccttgttttcctggagagagcgtgtggggcacccgggcacacttgg
taggcagattgtggggatgggagaacggacagctccatccctgggaggca
gtgttcttctttctggagagcattggggatgcaggcagggggggttactg
gctattccatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_120030343_120031343
seq2: B6Ng01-247M10.g_69_1081

seq1  GAATTCTTACCAGCTAGGCATGCCGGTTCTTCTGTCTGGTTTGTGCGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCAGCTAGGCATGCCGGTTCTTCTGTCTGGTTTGTGCGGCC  50

seq1  CTAGCAGTCTCAGCTCCTTAGAGGAGCACCTTTAAGGGCCCCCACCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGTCTCAGCTCCTTAGAGGAGCACCTTTAAGGGCCCCCACCTGTC  100

seq1  TCCCAACATCGTTTCAAATTTGTCTGGGGATCAGACTGGAGCCTGTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACATCGTTTCAAATTTGTCTGGGGATCAGACTGGAGCCTGTACTA  150

seq1  ACAGGATTTGGGTGACACTAAACCATAGGGGCCACACTCAGAACCACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTTGGGTGACACTAAACCATAGGGGCCACACTCAGAACCACTGC  200

seq1  GCCAGGCCAAATCCTCGGTGTAGGCAGTCACTGTGGGCAGCGGGCCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCAAATCCTCGGTGTAGGCAGTCACTGTGGGCAGCGGGCCTCAC  250

seq1  CTATGCCGGGAGGAGGAGGAGGAGGGTGCGTCCTTAGGCACGACCCCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCGGGAGGAGGAGGAGGAGGGTGCGTCCTTAGGCACGACCCCCCG  300

seq1  AAACCTAACACCCCGCTAGGCAGAAAAGGAGGCAGGCAATGAACTCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAACACCCCGCTAGGCAGAAAAGGAGGCAGGCAATGAACTCAGGT  350

seq1  AATGGAGAGTCAAGGGCTCCGAGCTAAGTGACCTTATCTCGGCAGCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAGTCAAGGGCTCCGAGCTAAGTGACCTTATCTCGGCAGCCCCC  400

seq1  CAAACTTGGACCCACCCGCCAATGGTGCCCTCTGCTGGCCATCCCAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGGACCCACCCGCCAATGGTGCCCTCTGCTGGCCATCCCAGTCT  450

seq1  CTGACAGGAAGGCTAATTGGCTCAGGAATCAAGCATAGTCGGTTCTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGGAAGGCTAATTGGCTCAGGAATCAAGCATAGTCGGTTCTGATT  500

seq1  GGTCACACTGGGCCGGTGGGCTAGGATACTGTGATTGACAGCCAGATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACACTGGGCCGGTGGGCTAGGATACTGTGATTGACAGCCAGATCAG  550

seq1  GAAGCAGTCAGTCGGAAAAGCTGTCTGGGCACCTTGTTTGGATCAAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTCAGTCGGAAAAGCTGTCTGGGCACCTTGTTTGGATCAAGCTC  600

seq1  TTCATACAAACAAGAAAAAGCCTTTCTCCTTCCCACCCGTACAGCGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACAAACAAGAAAAAGCCTTTCTCCTTCCCACCCGTACAGCGTGGC  650

seq1  TCCATCCCTGTATAATCACAGAAGTGGAGTTACTTCTGACCCAGAAGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCCTGTATAATCACAGAAGTGGAGTTACTTCTGACCCAGAAGCCT  700

seq1  CCACGCATGCTCTGACTATGTTAGAGTGTGAGGAGAGCCACAGTCATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCATGCTCTGACTATGTTAGAGTGTGAGGAGAGCCACAGTCATTCT  750

seq1  AAGAAAGCTGGTTGTCAGTCCTGAGTG-TCAGTCCTGAGTGTCAGGTTGA  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAGAAAGCTGGTTGTCAGTCCTGAGTGTTCAGTCCTGAGTGTCAGGTTGA  800

seq1  TCGACCTCTTCTGAGGAGAGTGCTTTGCAGCTGAGCTGGGTTACACCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACCTCTTCTGAGGAGAGTGCTTTGCAGCTGAGCTGGGTTACACCTCT  850

seq1  GCTTCCTTGTTTTCCTGGAGAGAGCGTGTGGGGCACCCGGG-ACACTT-G  897
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GCTTCCTTGTTTTCCTGGAGAGAGCGTGTGGGGCACCCGGGCACACTTGG  900

seq1  TAGGCAGATTGT-GGGAT-GGAGAACGGACAGCTCCATCCCT-GGAGGCA  944
      |||||||||||| ||||| ||||||||||||||||||||||| |||||||
seq2  TAGGCAGATTGTGGGGATGGGAGAACGGACAGCTCCATCCCTGGGAGGCA  950

seq1  GGTGTCTACTTTCTGGAGAGGA-TGGGGATGCAGGCA---GGGGTTACT-  989
      |   ||| |||||||||||| | ||||||||||||||   ||||||||| 
seq2  GTGTTCTTCTTTCTGGAGAGCATTGGGGATGCAGGCAGGGGGGGTTACTG  1000

seq1  GTTATT-CATGGT  1001
      | |||| ||||||
seq2  GCTATTCCATGGT  1013