BAC Information

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BAC

Clone NameB6Ng01-247M14
Chromosome11 (Build37)
Map Location 120,317,006 - 120,317,342
singlet/doubletsinglet
Overlap genenone
Upstream geneRnf213, A730011L01Rik, Nptx1, 4932417H02Rik, Chmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g
Downstream gene1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Tbcd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247M14.bB6Ng01-247M14.g
ACCGA056031GA056032
length939775
definitionB6Ng01-247M14.b B6Ng01-247M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtccttttcaagagcagtatgcgttcttagctaatgagccat
ctctccagccctttgtgacattaatatttttgaacagcaggctagctatt
ttcagtatctttcaatttgaagttgcttaaaaattttttaaaactttttt
gacttacgtacacatacacacatacacacacacacaacttgcagaagtaa
gctccctctttccccatatggattctgcatattaaactctgacaggtttt
gtggcaggtgactttatttgctgagccatctagccagccctgactgtttt
tctcattattttaaatgtaaaatgcttttgataggaaaacttcgtaagtg
atattagacccttctcagtgtgtcatgttagaaggcacaacatggcagtt
taccccattattaagatgttaaatttgaccaagcatggtggtacacacct
ataaacctagcactcaaaaggcagaagtaggcagatctctatgagtttga
ggccagccatcttacatagcaaattccaggccagataaacctgtacagtg
agaccctgtctcaaaaaaaaaaaacaaccaaaaaaacaaaacacccaaga
tttttgagtcaagtatggtgatgcatacttttaatccaagcacttaggag
gaaatgaatagatctttataagttcaaggtcagctggctcatctatgtag
tgagaccctgtctaaaacatagcaaaacaaaaaaacaaaaaacaaaaact
ccagccaactgggctggagaggtggcttggtggttaagagcactaactgc
tctttcagagtacctggcttcaattcccagtacccacacatggtggctca
caaccatctgtaatgaacaacttatgccctcttctggtgtgtctgaagac
agcaacagtatactcacatacataaataaataattcgct
gaattccctggggatacaggagcctgggctcggtgggaagggcttgcctc
ctgctacctcctactcacaagggagcccttctctcttttctctgtcccca
ctctgctgaatcctgccaccagcctctgcttttacctggatactccagta
gccagatagacgctaacaccttgtcctcagctcccaatacacctactgat
gaaatccacatacacgcagccgaggagtagtggcacacgtctttgatccc
agcactgagaaggtagaggcggggggggggggggggttgagatggtgggg
cgagttttgggacacattatggttcagctctgctttacctggcattgtac
cttttacagtgttgtcaaggagagcaattgtctatgcaggaagaggagga
atctgtcacatgctaaaggcccactagtgctaccgggtgaaaacttaaaa
ccctatgagcacgaggacataatcagacagttgcaaaccctgagtaggct
ctgcccatgcaggggcagggcagggcagctgagaaatttatctactaacc
tctgcacccagccctgagcccacaggccttgtaattgaagtacttgtggt
cttgggaagaaacactgatctagatgccctgagttataacaggtgcattg
agggaaaaatgctgacttcattctttttattaattctctgctacagaaag
tttaatttaaaacatacaagtgtggctttgtattttattcagttggttgg
tttgttaatgtactcttgtatgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_120317006_120317342
seq2: B6Ng01-247M14.b_527_930

seq1  GATCTCTA----TTTG-----------------------GTTTCA---CA  20
      ||||||||    ||||                        || ||   ||
seq2  GATCTCTATGAGTTTGAGGCCAGCCATCTTACATAGCAAATTCCAGGCCA  50

seq1  GAT-------------------CTGTGT------------------AAGA  33
      |||                   |||| |                  || |
seq2  GATAAACCTGTACAGTGAGACCCTGTCTCAAAAAAAAAAAACAACCAAAA  100

seq1  AAACCAAACA-----------TGGGCCGGGCAGTGATGGCGCTTGCTTTT  72
      |||| |||||           || | |  | | || ||  || | |||||
seq2  AAACAAAACACCCAAGATTTTTGAGTCAAGTA-TGGTGATGCATACTTTT  149

seq1  AATCCTAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  122
      ||||| ||||||| ||||| | | | |      ||| | ||||| ||| |
seq2  AATCCAAGCACTTAGGAGG-AAATGAATAGATCTTTATAAGTTCAAGGTC  198

seq1  AGCCTGGTCTACAAAGTGAGTTCCAGAACAGCCAGGCTACACAGAGAAAC  172
      |||  | ||  | | ||                         || || ||
seq2  AGCTGGCTCATCTATGT-------------------------AGTGAGAC  223

seq1  CCTGTCTCAAA---AAAAAAACAAAAAAACAAAAAACAAAAA--------  211
      ||||||| |||   |  |||||||||||||||||||||||||        
seq2  CCTGTCTAAAACATAGCAAAACAAAAAAACAAAAAACAAAAACTCCAGCC  273

seq1  ---AGGGCTGGCGAGATGGCTCAGTGGTTAAGAGAGCCGACTGCTCTCCC  258
          ||||||| ||| |||||  |||||||||||  |  ||||||||  |
seq2  AACTGGGCTGGAGAGGTGGCTTGGTGGTTAAGAGCACTAACTGCTCTTTC  323

seq1  GAAGGTCCCGAGTTCAAATCCCAGCAAC--CACATGGTGGCTCACAGACC  306
        ||  || |  ||||| |||||| | |  |||||||||||||||| |||
seq2  AGAGTACCTGGCTTCAATTCCCAGTACCCACACATGGTGGCTCACA-ACC  372

seq1  ATCCGTAATGAA-ATCTGATGCCCTCTTCTGG  337
      ||| |||||||| | || ||||||||||||||
seq2  ATCTGTAATGAACAACTTATGCCCTCTTCTGG  404