BAC Information

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BAC

Clone NameB6Ng01-252H09
Chromosome11 (Build37)
Map Location 7,045,188 - 7,114,371
singlet/doubletdoublet
Overlap geneAdcy1, LOC100041347, Igfbp1, Igfbp3
Upstream geneNudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252H09.bB6Ng01-252H09.g
ACCGA059450GA059451
length6661,140
definitionB6Ng01-252H09.b B6Ng01-252H09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,113,706 - 7,114,371)(7,045,188 - 7,046,324)
sequence
gaattccattgcgggaactttacaaagtacacaggcgctgaatgggtccg
ggccagcttcccaaacataaaccatccctggaaaggccagcttagccagc
catccagcgggaggggctatagggtccgggacgccaaattggctgggagt
cattgaaggaagagaagaccagagtccctggagtggctgggactctagag
acgcaaggtggcctggagcgcctgtggttacccgtgaagaggtggccctg
atacagggcgtgcgcacagagagcaggtgcccggtgaagacgcgcgcagc
gcgcccccgtcctcgttcccgcttcgtcgggaggcgcgggccccggagcg
gagcctgcgccggcccaccccccaccctcgccgttccggggcgtgtcctc
cgccaccccggcttctatatatcggcctgcgcgcccgggctgcccagatg
cgagcttagagcggcgactgggcgctgaggacctgcttgctcgctgctcc
catcccgccgcctcatcccgccgcctcatcccgcgtgctccactccgctc
ccctccaccgagccgtccacccggcgccatgcatcccgcgcgccccgcgc
tctgggcggctgcgctcactgccctcactctgctccgcggaccgccggtg
gcgcgagctggcgcgg
gaattccaggcctctaggaacactgcttgtttttcttgtttttatgactg
aatagctgacaggaaacaattgaaggtacaaagaattgatttggggttac
aatgtgaaggtacagttagttcatcatggcaggagaagcgtggccccgtg
agagactgttagctttggtgggaggagcctgagcctgtttgcccacatca
aagtgaatctagaagtggggcatgtgtgacacatcctctgtgactcactt
cctcccacgaggctccgcatcctaaaggtttggcaacctacccaaataat
gccactgtctgagggtcaagggtgcaagcccatttcactttgagaccaaa
cactggggttggacttgggtgtcctcctatgctcaagttccattttctaa
ttagcctcctgttgctcctagcattttgaggagatcaccgggcacttgcc
cttcttcatgggctctaggtagcaaccgacaagcctgctggcatataacg
ggatcgctgtttttagtttttaatttgctgaattctaagactttgtgtgt
gtgtgtgttttcctttgacttctctatcacatgccacacaccgttgtcct
cagagggacttctgaggagaacacatgacctttcttctttctctgtccac
atcacttttaaaagcgtcaacgtgaggaaaaaaaatggctctgaacagga
aggcaatgtagcgatttaaatggcatttaccgtcatttgagtcagtgtaa
atgtgcaaagtttggagccaggaagacatgggaagtctccaatgtccttt
tcttccagctcctgtttcctagtgtgaccgaccttgagggcataatgtct
ccttcaagtttccagaaagcacatagttctcagtccctgctaagtacagg
aaagcctgtctgtgggctgcacagacaactgtaaatgtggcagtctacca
gatgggttttatctacaggtcaggcttttctaagaaaacattctccccaa
acaaggtattcagtagtacagctctgtgaagttgggcactttcctccaat
tagaagggaagtcttgcctgcagcaagcctaaactctggatgagtagtat
gaattgtgagtgtcttaagtgttcaccccaggagctcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7113706_7114371
seq2: B6Ng01-252H09.b_47_712 (reverse)

seq1  CCGCGCCAGCTCGCGCCACCGGCGGTCCGCGGAGCAGAGTGAGGGCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGCCAGCTCGCGCCACCGGCGGTCCGCGGAGCAGAGTGAGGGCAGTG  50

seq1  AGCGCAGCCGCCCAGAGCGCGGGGCGCGCGGGATGCATGGCGCCGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAGCCGCCCAGAGCGCGGGGCGCGCGGGATGCATGGCGCCGGGTGG  100

seq1  ACGGCTCGGTGGAGGGGAGCGGAGTGGAGCACGCGGGATGAGGCGGCGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTCGGTGGAGGGGAGCGGAGTGGAGCACGCGGGATGAGGCGGCGGG  150

seq1  ATGAGGCGGCGGGATGGGAGCAGCGAGCAAGCAGGTCCTCAGCGCCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCGGCGGGATGGGAGCAGCGAGCAAGCAGGTCCTCAGCGCCCAGT  200

seq1  CGCCGCTCTAAGCTCGCATCTGGGCAGCCCGGGCGCGCAGGCCGATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGCTCTAAGCTCGCATCTGGGCAGCCCGGGCGCGCAGGCCGATATAT  250

seq1  AGAAGCCGGGGTGGCGGAGGACACGCCCCGGAACGGCGAGGGTGGGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCGGGGTGGCGGAGGACACGCCCCGGAACGGCGAGGGTGGGGGGT  300

seq1  GGGCCGGCGCAGGCTCCGCTCCGGGGCCCGCGCCTCCCGACGAAGCGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGGCGCAGGCTCCGCTCCGGGGCCCGCGCCTCCCGACGAAGCGGGA  350

seq1  ACGAGGACGGGGGCGCGCTGCGCGCGTCTTCACCGGGCACCTGCTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGACGGGGGCGCGCTGCGCGCGTCTTCACCGGGCACCTGCTCTCTG  400

seq1  TGCGCACGCCCTGTATCAGGGCCACCTCTTCACGGGTAACCACAGGCGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCACGCCCTGTATCAGGGCCACCTCTTCACGGGTAACCACAGGCGCT  450

seq1  CCAGGCCACCTTGCGTCTCTAGAGTCCCAGCCACTCCAGGGACTCTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCACCTTGCGTCTCTAGAGTCCCAGCCACTCCAGGGACTCTGGTC  500

seq1  TTCTCTTCCTTCAATGACTCCCAGCCAATTTGGCGTCCCGGACCCTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCCTTCAATGACTCCCAGCCAATTTGGCGTCCCGGACCCTATAG  550

seq1  CCCCTCCCCCTGGATGGCTGGCTAAGCTGGCCTTTCCAGGGATGGTTTAT  600
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCGCTGGATGGCTGGCTAAGCTGGCCTTTCCAGGGATGGTTTAT  600

seq1  GTTTGGGAAGCTGGCCCGGACCCATTCAGCGCCTGTGTACTTTGTAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGAAGCTGGCCCGGACCCATTCAGCGCCTGTGTACTTTGTAAAGT  650

seq1  TCCCGCAATGGAATTC  666
      ||||||||||||||||
seq2  TCCCGCAATGGAATTC  666

seq1: chr11_7045188_7046324
seq2: B6Ng01-252H09.g_67_1206

seq1  GAATTCCAGGCCTCTAGGAACACTGCTTGTTTTTCTTGTTTTTATGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCTCTAGGAACACTGCTTGTTTTTCTTGTTTTTATGACTG  50

seq1  AATAGCTGACAGGAAACAATTGAAGGTACAAAGAATTGATTTGGGGTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTGACAGGAAACAATTGAAGGTACAAAGAATTGATTTGGGGTTAC  100

seq1  AATGTGAAGGTACAGTTAGTTCATCATGGCAGGAGAAGCGTGGCCCCGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAAGGTACAGTTAGTTCATCATGGCAGGAGAAGCGTGGCCCCGTG  150

seq1  AGAGACTGTTAGCTTTGGTGGGAGGAGCCTGAGCCTGTTTGCCCACATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGTTAGCTTTGGTGGGAGGAGCCTGAGCCTGTTTGCCCACATCA  200

seq1  AAGTGAATCTAGAAGTGGGGCATGTGTGACACATCCTCTGTGACTCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAATCTAGAAGTGGGGCATGTGTGACACATCCTCTGTGACTCACTT  250

seq1  CCTCCCACGAGGCTCCGCATCCTAAAGGTTTGGCAACCTACCCAAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCACGAGGCTCCGCATCCTAAAGGTTTGGCAACCTACCCAAATAAT  300

seq1  GCCACTGTCTGAGGGTCAAGGGTGCAAGCCCATTTCACTTTGAGACCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTCTGAGGGTCAAGGGTGCAAGCCCATTTCACTTTGAGACCAAA  350

seq1  CACTGGGGTTGGACTTGGGTGTCCTCCTATGCTCAAGTTCCATTTTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGTTGGACTTGGGTGTCCTCCTATGCTCAAGTTCCATTTTCTAA  400

seq1  TTAGCCTCCTGTTGCTCCTAGCATTTTGAGGAGATCACCGGGCACTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTCCTGTTGCTCCTAGCATTTTGAGGAGATCACCGGGCACTTGCC  450

seq1  CTTCTTCATGGGCTCTAGGTAGCAACCGACAAGCCTGCTGGCATATAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCATGGGCTCTAGGTAGCAACCGACAAGCCTGCTGGCATATAACG  500

seq1  GGATCGCTGTTTTTAGTTTTTAATTTGCTGAATTCTAAGACTTTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCGCTGTTTTTAGTTTTTAATTTGCTGAATTCTAAGACTTTGTGTGT  550

seq1  GTGTGTGTTTTCCTTTGACTTCTCTATCACATGCCACACACCGTTGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTTTCCTTTGACTTCTCTATCACATGCCACACACCGTTGTCCT  600

seq1  CAGAGGGACTTCTGAGGAGAACACATGACCTTTCTTCTTTCTCTGTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGACTTCTGAGGAGAACACATGACCTTTCTTCTTTCTCTGTCCAC  650

seq1  ATCACTTTTAAAAGCGTCAACGTGAGGAAAAAAAATGGCTCTGAACAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTTAAAAGCGTCAACGTGAGGAAAAAAAATGGCTCTGAACAGGA  700

seq1  AGGCAATGTAGCGATTTAAATGGCATTTACCGTCATTTGAGTCAGTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGTAGCGATTTAAATGGCATTTACCGTCATTTGAGTCAGTGTAA  750

seq1  ATGTGCAAAGTTTGGAGCCAGGAAGACATGGGAAGTCTCCAATGTCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAAAGTTTGGAGCCAGGAAGACATGGGAAGTCTCCAATGTCCTTT  800

seq1  TCTTCCAGCTCCTGTTTCCTAGTGTGACCGACCTTGAGGGCATAATGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGCTCCTGTTTCCTAGTGTGACCGACCTTGAGGGCATAATGTCT  850

seq1  CCTTCAAGTTTCCAGAAAGCACATAGTTCTCAGTCCCTGCTAAGTACAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGTTTCCAGAAAGCACATAGTTCTCAGTCCCTGCTAAGTACAGG  900

seq1  -AAGCCTGTCTGTGGGCTGCACAGACAACTGTAAATGTGGCAGTCTACCA  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTGTCTGTGGGCTGCACAGACAACTGTAAATGTGGCAGTCTACCA  950

seq1  GAT-GGTTTTATCTACAGGTCAGGCTTTTCTA--GAAACATCTTCCCCAG  996
      ||| ||||||||||||||||||||||||||||   ||||||  |||||| 
seq2  GATGGGTTTTATCTACAGGTCAGGCTTTTCTAAGAAAACATTCTCCCCAA  1000

seq1  AC-AGGTA-TCAGTAGTACAGCTCTGTGAAGTTGGGCAC-TTCCTCC-AT  1042
      || ||||| |||||||||||||||||||||||||||||| ||||||| ||
seq2  ACAAGGTATTCAGTAGTACAGCTCTGTGAAGTTGGGCACTTTCCTCCAAT  1050

seq1  TAGAAGGGAAGGTCTTGCCTGCAGCCAAGGCTAAACTCTGGGATGAGGTA  1092
      |||||||||| ||||||||||||| |||| ||||||||| |||||| |||
seq2  TAGAAGGGAA-GTCTTGCCTGCAG-CAAGCCTAAACTCT-GGATGA-GTA  1096

seq1  GTATGAATGGTGATGGTCTTAGGTGTCTCA-CCCAGGAGCCTCAGG  1137
      |||||||| ||||  |||||| |||| ||| |||||||| ||||||
seq2  GTATGAATTGTGAGTGTCTTAAGTGT-TCACCCCAGGAG-CTCAGG  1140