BAC Information

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BAC

Clone NameB6Ng01-255B14
Chromosome11 (Build37)
Map Location 10,987,556 - 11,084,732
singlet/doubletdoublet
Overlap geneVwc2
Upstream geneLOC382483
Downstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255B14.bB6Ng01-255B14.g
ACCGA061391GA061392
length1,0261,152
definitionB6Ng01-255B14.b B6Ng01-255B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,083,921 - 11,084,732)(10,987,556 - 10,988,285)
sequence
gaattctcccatgctctttgcttcagatcccgactctaggttactgcctt
aagttcctaccttgaattccctagatgatggactgtaatcaaataacctt
ccctcccccccgaagttggtcttgggttttttttattgtagcaatgaaaa
gcaaaataaaacatatatcttttccttccaactgatgtgtacattcaatg
caacctcaatcaaaactcaaagatgttgtaaagactgaagagatgattta
aaatcttatcagcatatacaggccaaagcaattttaaaaatgtttgacat
ttcaggatatctgctttacttactgttagtctggagtgatcaagtaggat
attaacataagaataaatgcatgcattcatggatcaaagtcaataattta
aataggtccacaatgatatggtaaatctatttggataaaaaataagtcaa
tggggaaaatatttttttggaaatggtacaagcacaattggatttgaaaa
tggaaacagttattaaactttctctctatatatacctaaatatatgggtc
aaaaaaacctgaaatcataaaacttctggttcacaataaaaaataaaaaa
gtaattggtgatgttgggttaggtaaatagaacataaaatataaaccata
atagacagatgggaaaattaaactttatgaaaattaaaatattttgctct
ttgaaaggtaccatttaggcataaaagacaagccacagcctgaaaacaaa
tattcatcacacacacacacacatacacacagagagagagagacagagcg
agagagagagacagagagacagagagagacagggagacagagagagacag
agagaaggacagagatagatagatagagagagagagagagagagagagag
agagagagatcacaaagggtttgaaataagccagttcaaatcaataatga
agaatcaagcaactcaaaagaaaaagtgagccaaagattcttggacaact
cagaaaagttcactttctgaatgaaa

gaattccatctaaattctcctgagaaagagagagaaagagagagagagag
agagagaaagagagagagaaagagagagagagagagagagagagagaaag
ggagggagagggagagagagggagagagagagagagagagagagagagag
agagagagcatgcgcgtatatacacatgcatgtgtgtgcaccaaatttat
aggcaattgcaaggaaagttaaacaagcaaaaattatggaaacacaataa
gttaaaggactccaagttaccaattcaaagtttactaattaaaattgaga
gatatgagaataaggaaacatagatagatgaggaaaaaattgaaatctat
atataaacccatacatctatattaatatatatccagcaaatctgtaagtc
tattcaatagcagaaaataataatctacttaacaaatggagttgggaaat
tatgcatcaatattcaagaaaggtaaaactttaaaccttccttcatatca
catttaaattttatttaagatggcttattgacttaaagtataaaacaatg
aatctgagagggcaaagaatgactagtgtttaggatcttctattcaaata
cagccttggattcttagatatgatatcaaaagcagaactacaaggattaa
aattgtgcacaaagattaaactcttgtatttatcaaggagatcattaaga
aagcaaaaacaacttataaaatattacaaaacatttgcaaaggatacatg
tgacatgagggctagtatttcacaatacacaaagagctgttccaatgaca
aaaggcaaacaacatgattttcaatgcataaaggaattgaaaagacaatt
tctccaacagaaatctaataagagacaccaaagaaataggaagatggcta
gagatccctctggacttataaccctttaatatttccctttcactcttagt
aaattaatggggaagtatattcaacagccttccttcattaaaaattcatc
caaaacttcatttcaaagctcaccctttagatattcagattttctcagca
tgaacactacctataataaaaagaaacatttaatcccaagcctgcggaat
aagaacaccaaacaactaggaatgggacattgctatataggctatttgtt
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11083921_11084732
seq2: B6Ng01-255B14.b_45_856 (reverse)

seq1  GTCTCTCTCTCTCGCTCTGTCTCTCTCTCTCTGTGTGTATGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTCTCTCGCTCTGTCTCTCTCTCTCTGTGTGTATGTGTGTGTGT  50

seq1  GTGTGATGAATATTTGTTTTCAGGCTGTGGCTTGTCTTTTATGCCTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATGAATATTTGTTTTCAGGCTGTGGCTTGTCTTTTATGCCTAAAT  100

seq1  GGTACCTTTCAAAGAGCAAAATATTTTAATTTTCATAAAGTTTAATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTTTCAAAGAGCAAAATATTTTAATTTTCATAAAGTTTAATTTTC  150

seq1  CCATCTGTCTATTATGGTTTATATTTTATGTTCTATTTACCTAACCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTCTATTATGGTTTATATTTTATGTTCTATTTACCTAACCCAAC  200

seq1  ATCACCAATTACTTTTTTATTTTTTATTGTGAACCAGAAGTTTTATGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAATTACTTTTTTATTTTTTATTGTGAACCAGAAGTTTTATGATT  250

seq1  TCAGGTTTTTTTGACCCATATATTTAGGTATATATAGAGAGAAAGTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTTTTTGACCCATATATTTAGGTATATATAGAGAGAAAGTTTAA  300

seq1  TAACTGTTTCCATTTTCAAATCCAATTGTGCTTGTACCATTTCCAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTTTCCATTTTCAAATCCAATTGTGCTTGTACCATTTCCAAAAAA  350

seq1  ATATTTTCCCCATTGACTTATTTTTTATCCAAATAGATTTACCATATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCCCCATTGACTTATTTTTTATCCAAATAGATTTACCATATCAT  400

seq1  TGTGGACCTATTTAAATTATTGACTTTGATCCATGAATGCATGCATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACCTATTTAAATTATTGACTTTGATCCATGAATGCATGCATTTAT  450

seq1  TCTTATGTTAATATCCTACTTGATCACTCCAGACTAACAGTAAGTAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGTTAATATCCTACTTGATCACTCCAGACTAACAGTAAGTAAAGC  500

seq1  AGATATCCTGAAATGTCAAACATTTTTAAAATTGCTTTGGCCTGTATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCCTGAAATGTCAAACATTTTTAAAATTGCTTTGGCCTGTATATG  550

seq1  CTGATAAGATTTTAAATCATCTCTTCAGTCTTTACAACATCTTTGAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAGATTTTAAATCATCTCTTCAGTCTTTACAACATCTTTGAGTTT  600

seq1  TGATTGAGGTTGCATTGAATGTACACATCAGTTGGAAGGAAAAGATATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAGGTTGCATTGAATGTACACATCAGTTGGAAGGAAAAGATATAT  650

seq1  GTTTTATTTTGCTTTTCATTGCTACAATAAAAAAAACCCAAGACCAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTTGCTTTTCATTGCTACAATAAAAAAAACCCAAGACCAACTT  700

seq1  CGGGGGGGAGGGAAGGTTATTTGATTACAGTCCATCATCTAGGGAATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGGGAGGGAAGGTTATTTGATTACAGTCCATCATCTAGGGAATTCA  750

seq1  AGGTAGGAACTTAAGGCAGTAACCTAGAGTCGGGATCTGAAGCAAAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAACTTAAGGCAGTAACCTAGAGTCGGGATCTGAAGCAAAGAGC  800

seq1  ATGGGAGAATTC  812
      ||||||||||||
seq2  ATGGGAGAATTC  812


seq1: chr11_10987556_10988285
seq2: B6Ng01-255B14.g_465_1216

seq1  TATTCAATAGCAGAAAATAATAATCTACTTAACAAATGGAGTTGGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATAGCAGAAAATAATAATCTACTTAACAAATGGAGTTGGGAAAT  50

seq1  TATGCATCAATATTCAAGAAAGGTAAAACTTTAAACCTTCCTTCATATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATCAATATTCAAGAAAGGTAAAACTTTAAACCTTCCTTCATATCA  100

seq1  CATTTAAATTTTATTTAAGATGGCTTATTGACTTAAAGTATAAAACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAATTTTATTTAAGATGGCTTATTGACTTAAAGTATAAAACAATG  150

seq1  AATCTGAGAGGGCAAAGAATGACTAGTGTTTAGGATCTTCTATTCAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAGAGGGCAAAGAATGACTAGTGTTTAGGATCTTCTATTCAAATA  200

seq1  CAGCCTTGGATTCTTAGATATGATATCAAAAGCAGAACTACAAGGATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTGGATTCTTAGATATGATATCAAAAGCAGAACTACAAGGATTAA  250

seq1  AATTGTGCACAAAGATTAAACTCTTGTATTTATCAAGGAGATCATTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGCACAAAGATTAAACTCTTGTATTTATCAAGGAGATCATTAAGA  300

seq1  AAGCAAAAACAACTTATAAAATATTACAAAACATTTGCAAAGGATACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAACAACTTATAAAATATTACAAAACATTTGCAAAGGATACATG  350

seq1  TGACATGAGGGCTAGTA-TTCACAATACACAAAGAGCTGTTCCAATGACA  399
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGACATGAGGGCTAGTATTTCACAATACACAAAGAGCTGTTCCAATGACA  400

seq1  AAAGGCAAACAACATGATTTTCAAATGCATAAAGGAATTGAAAAGACAAT  449
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGGCAAACAACATGATTTTC-AATGCATAAAGGAATTGAAAAGACAAT  449

seq1  TTCTCCAACAGAAATCTAATAAGAGACAACAAAGAAATAGGAAGATGGCT  499
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTCCAACAGAAATCTAATAAGAGACACCAAAGAAATAGGAAGATGGCT  499

seq1  AGAGATCCCTCTGGACTTAT-ACCCTTT-ATATTTCCCTTTCACTCTTAG  547
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  AGAGATCCCTCTGGACTTATAACCCTTTAATATTTCCCTTTCACTCTTAG  549

seq1  TAAATTA--TGGGAAGTATAT--CACAGCTTTCCTTCATT-AAAATTCAT  592
      |||||||   |||||||||||   ||||| |||||||||| |||||||||
seq2  TAAATTAATGGGGAAGTATATTCAACAGCCTTCCTTCATTAAAAATTCAT  599

seq1  CCAAAAACTCATTTCAAAGCTCA-CCTTTAGATATTCAGA-TTTCTCAGC  640
      ||||||  ||||||||||||||| |||||||||||||||| |||||||||
seq2  CCAAAACTTCATTTCAAAGCTCACCCTTTAGATATTCAGATTTTCTCAGC  649

seq1  ATGAACAACTA-CTAT-ATAAAA--GAACATTTA--TCCAAG-CTGCGGA  683
      |||||| |||| |||| ||||||   ||||||||   ||||| |||||||
seq2  ATGAAC-ACTACCTATAATAAAAAGAAACATTTAATCCCAAGCCTGCGGA  698

seq1  ATA--GACACCAACCAATTAGGA--TGGACATTG-TCTATA-GCTA-TTG  726
      |||   ||||||| ||| |||||   |||||||| | |||| |||| |||
seq2  ATAAGAACACCAAACAACTAGGAATGGGACATTGCTATATAGGCTATTTG  748

seq1  TTTC  730
      ||||
seq2  TTTC  752


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