BAC Information

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BAC

Clone NameB6Ng01-255J18
Chromosome11 (Build37)
Map Location 18,926,323 - 18,927,372
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627696, LOC627716, LOC665796, Meis1
Downstream geneLOC635455, LOC100042708, Glns-ps1, LOC665868, LOC100041937, Spred2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255J18.bB6Ng01-255J18.g
ACCGA061776GA061777
length1,0471,121
definitionB6Ng01-255J18.b B6Ng01-255J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcggtgcggaaaaacactaggagaaaagaagaagaaactgaa
gggtgcctgctgagcagttactcatttgtgacgtacttttctgtgccttt
attgaaaaatgaaaaataaataccatctttccttgtcttaaaaatagctt
cagactacggttatgcttgctgaaaatcacattgtctaaacaacttctgc
atggtagggtccgtttgaaaacgggaggaaaagtctacaatcttgcaggc
tcccctccttccaggtccgaaaggataatttctctcacaggcgcttcctt
ggccacttccgggaatatggggtgggggcagtcaccgtatccctccgcct
gtgcgggtacgtgtcgccaagcctcagtggcctgcctgcactcctggagt
gagcattccctgggatcggtggggtgcccgaggccacgggatttgcaagc
acaggggataggagtctgtgcacactgggctgggttcaggggagttctga
gtcctttggggagaggacgagtggccagaaaaggtggaaaagatcccttt
gcaggtagctgcctgtcgggtccccggccactctggacagccattctgtg
ggggacttgagggggggactgagggagcagatcccgtctagaggctctgg
gtagcccgcccggtgcaaagctcttggggacacagggacaccgcgcgcga
ctctggcaatagcttccactgctcgaggctgagtgtcataaggtgccttt
cttcccagctagactgaaggattcctgagctctcggcctggggtctgatt
ctagaagcttctggcctttgttcacggacagtttttccttcgaggggcat
tcaggcggtcaataggtcctgtaggtcatgtgctcggtgatcagagagcc
tcggaacatggaagggactcttgtgcacgctcggaagggaggagcttgaa
ctgagttagggcttcaggttctcagagagccgcgtggaaattcgcgcgtg
ttctcactcagcttcccggccgcgcagtgacccgagggacctaggga

gaattctttgtttagctctgtactccatttttaaacaaggatatttggtt
ctctgaattctaacttcttgagttgtttgtatatattggatattagccct
ctattggatgtaggattggtaaagatcttttcccaatctgttggttgcca
ttttgtcttattgacggtgtcctttgccttacagaagctttgcaatttta
tgaggttccatttggcaaaatgctgggtcctgtttacatatgcagttagt
ctacatctttttattgaggaattagtctattgatattaattattatatta
atcctgccaattcataagcatgagagacttttccatcttctgagatcttt
ttcaatttctttcatcagggacttgaaattcctgtcatacagatctttca
cttgcttggttagagtcacaccaaggtatttattattattattatttgtg
actattgtgaagggtgtcatttatctaattttttccccagcctgtttgtc
ctttgagtagaggaagactactgatttgttttatttaattttatttccag
ccactttgctgaagtggtttgtagaagttctctggtggaatttttagggt
cacttaagtatactatcatatcatctgcaaatagtgatattttgaattct
tcctttccaggttgaattcctttgccctcctttttgtctaattgctctgg
ctagaacttgggtactatactgaataggtaggggagagtgggcagccttg
tctagtccctgattttagagtgattgctaaaggtttagtttgatgttgtc
tttctcactgatgtaggtttcctgtatgcagcaaaaatgctgggtccttt
ttacatatgcagttagttctacatccttttattgagggatttgagtccat
tgattattaagagatattaaggaaaagtggattgttgcttcctgctattt
tttgttgtaaagaagtgggagttatgtttgtggtgactaatcttcttttg
gcatttcttgaaaatctacttcctggcctattcagtgggtaagatcccct
gccttgtgttggagttttccatcttttatctttctgaaaaaagtggaagc
aggaaataattcgtgtatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_18926323_18927372
seq2: B6Ng01-255J18.b_45_1091

seq1  GAATTCTAGCGGTGCGGAAAAACACTAGGAGAAAAGAAGAAGAAACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCGGTGCGGAAAAACACTAGGAGAAAAGAAGAAGAAACTGAA  50

seq1  GGGTGCCTGCTGAGCAGTTACTCATTTGTGACGTACTTTTCTGTGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCCTGCTGAGCAGTTACTCATTTGTGACGTACTTTTCTGTGCCTTT  100

seq1  ATTGAAAAATGAAAAATAAATACCATCTTTCCTTGTCTTAAAAATAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAAATGAAAAATAAATACCATCTTTCCTTGTCTTAAAAATAGCTT  150

seq1  CAGACTACGGTTATGCTTGCTGAAAATCACATTGTCTAAACAACTTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTACGGTTATGCTTGCTGAAAATCACATTGTCTAAACAACTTCTGC  200

seq1  ATGGTAGGGTCCGTTTGAAAACGGGAGGAAAAGTCTACAATCTTGCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGGGTCCGTTTGAAAACGGGAGGAAAAGTCTACAATCTTGCAGGC  250

seq1  TCCCCTCCTTCCAGGTCCGAAAGGATAATTTCTCTCACAGGCGCTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCTTCCAGGTCCGAAAGGATAATTTCTCTCACAGGCGCTTCCTT  300

seq1  GGCCACTTCCGGGAATATGGGGTGGGGGCAGTCACCGTATCCCTCCGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTTCCGGGAATATGGGGTGGGGGCAGTCACCGTATCCCTCCGCCT  350

seq1  GTGCGGGTACGTGTCGCCAAGCCTCAGTGGCCTGCCTGCACTCCTGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGGGTACGTGTCGCCAAGCCTCAGTGGCCTGCCTGCACTCCTGGAGT  400

seq1  GAGCATTCCCTGGGATCGGTGGGGTGCCCGAGGCCACGGGATTTGCAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTCCCTGGGATCGGTGGGGTGCCCGAGGCCACGGGATTTGCAAGC  450

seq1  ACAGGGGATAGGAGTCTGTGCACACTGGGCTGGGTTCAGGGGAGTTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGATAGGAGTCTGTGCACACTGGGCTGGGTTCAGGGGAGTTCTGA  500

seq1  GTCCTTTGGGGAGAGGACGAGTGGCCAGAAAAGGTGGAAAAGATCCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGGGGAGAGGACGAGTGGCCAGAAAAGGTGGAAAAGATCCCTTT  550

seq1  GCAGGTAGCTGCCTGTCGGGTCCCCGGCCACTCTGGACAGCCATTCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTAGCTGCCTGTCGGGTCCCCGGCCACTCTGGACAGCCATTCTGTG  600

seq1  GGGGACTTGAGGGGGGGACTGAGGGAGCAGATCCCGTCTAGAGGCTCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTTGAGGGGGGGACTGAGGGAGCAGATCCCGTCTAGAGGCTCTGG  650

seq1  GTAGCCCGCCCGGTGCAAAGCTCTTGGGGACACAGGGACACCGCGCGCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCGCCCGGTGCAAAGCTCTTGGGGACACAGGGACACCGCGCGCGA  700

seq1  CTCTGGCAATAGCTTCCACTGCTCGAGGCTGAGTGTCATAAGGTGCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCAATAGCTTCCACTGCTCGAGGCTGAGTGTCATAAGGTGCCTTT  750

seq1  CTTCCCAGCTAGACTGAAGGATTCCTGAGCTCTCGGCCTGGGGTCTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCTAGACTGAAGGATTCCTGAGCTCTCGGCCTGGGGTCTGATT  800

seq1  CTAGAAGCTTCTGGCCTTTGTTCACGGACAGTTTTTCCTTCGAGGGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGCTTCTGGCCTTTGTTCACGGACAGTTTTTCCTTCGAGGGGCAT  850

seq1  TCAGGCGGTCAATAGGTCCTGTAGGTCATGTGCTCGGTGATCAGAGAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCGGTCAATAGGTCCTGTAGGTCATGTGCTCGGTGATCAGAGAGCC  900

seq1  TCGGAACATGG-AGGGACCCTTGTGCACGCTCGG-AGGGAGGAGC-TGAA  947
      ||||||||||| |||||| ||||||||||||||| |||||||||| ||||
seq2  TCGGAACATGGAAGGGACTCTTGTGCACGCTCGGAAGGGAGGAGCTTGAA  950

seq1  CTGAGTTAGGGCTTCAGGTTCTCAGAAGAGCCGCGTGGAGATTCGCGCGT  997
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CTGAGTTAGGGCTTCAGGTTCTCAG-AGAGCCGCGTGGAAATTCGCGCGT  999

seq1  GTCCTCACTTCAGCTTCCGGCCGCCGCG-AGTGGACGCGGAGGGACCTAA  1046
      || ||||| |||||||||  | |||||| ||| ||| | ||||||||| |
seq2  GTTCTCAC-TCAGCTTCC--CGGCCGCGCAGT-GAC-CCGAGGGACCT-A  1043

seq1  GGGA  1050
      ||||
seq2  GGGA  1047


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