BAC Information

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BAC

Clone NameB6Ng01-259A02
Chromosome11 (Build37)
Map Location 93,617,535 - 93,618,288
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382545, LOC100039286, Car10, LOC629636
Downstream geneUtp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259A02.bB6Ng01-259A02.g
ACCGA064300GA064301
length7591,208
definitionB6Ng01-259A02.b B6Ng01-259A02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatagagcaaatgaggtgcttatagaagcatccagcccagcccc
atgtctataacagtgctgctcttggcttagtaccctttccatccttcttg
gttgtggaaggatcaaactctgcagaatccctagtgagagttcttatttg
taggagtaacagaggtgcttcatcttggtctctggcccttcttttttacc
gtgtcttttgctttttttttttttttttcttttttccagagctgaggcgt
gaacctaaggccttgcgcttgctaggcaagtgctgtaccactgagctaaa
ttcccaatcctgtcttttgctcttaaagaatcaattttctggctcatgga
actccttcttttacaatgccattgatactgacttacatgtcctggatttt
cattttgaagaaaatctctctctctctctctctctctctctctctctctc
tctctctgtacgatatctgtgcacacattctctctgtgtatgatatctgt
gcacacatttgtgcatgtgaatgttacatgtaccatggtgtttgttctta
tcttccatcttgtttgggacaatgtttcttgttggctttttctgtggaga
tgccaagctagctggcttatgggttttctccatctccctgtggggatgct
gggattacagacccttatgcaaccaagtctagcatttttgtggattctag
agggtttgaatttattcctcacatcctgtggggcaaatccccttaaccca
tggagatat
gaattctcacctgaggaataccgaatgactgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaacattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaacctggagagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcattatcctgagtgaggtacccaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgcaaaacacatgaaactcaag
aagaacgaagaccaaagtgtggacaaagttttgcctcctcttagaattgg
gaacaaaacacccatggaaggagttacagagagaaagtttggagctgaga
tgaaaggatggaccatctagagactgccatacccagggatccatcccata
atcagcctccaaacgctgacaccattgcatacactagcaagattttgctg
aaaggaccctgatatagctgtctcttgtgagactatgctggggcctagca
aacacagaagttgaatgctcacagtcagcttattggatgcatcacaggtc
ccccaatggaagagctagagaaagtacccaaggagctaaagggatctgca
acccaataggtgcacaatattgaactaaccagtacccccacccctactct
gggagctcgtgtctcttagcttgcatatgtatcagaagaatgccctagat
cgccattcatggtaagaagaggtccattggtcttgcaactttatatggcc
ctagttacagggaaatgtcaggccaagaagatgtggggatagtgatttag
tctattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93617535_93618288
seq2: B6Ng01-259A02.b_46_804 (reverse)

seq1  ATATCTCCATGGAT--AAGGTATTTGCCCCACA-GATGTGAGGAATAAAT  47
      |||||||||||| |  | || |||||||||||| ||||||||||||||||
seq2  ATATCTCCATGGGTTAAGGGGATTTGCCCCACAGGATGTGAGGAATAAAT  50

seq1  TCAAA-CCTCTAGAATCCAC-AAAATGCTAGACTTGGTTGCATAAGGGTC  95
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAAACCCTCTAGAATCCACAAAAATGCTAGACTTGGTTGCATAAGGGTC  100

seq1  TGTAATCCCAGCATCCCCACAGGGAGATGGAGAAAACCCATAAGCCAGCT  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCCCAGCATCCCCACAGGGAGATGGAGAAAACCCATAAGCCAGCT  150

seq1  AGCTTGGCATCTCCACAGAAAAAGCCAACAAGAAACATTGTCCCAAACAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGCATCTCCACAGAAAAAGCCAACAAGAAACATTGTCCCAAACAA  200

seq1  GATGGAAGATAAGAACAAACACCATGGTACATGTAACATTCACATGCACA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGATAAGAACAAACACCATGGTACATGTAACATTCACATGCACA  250

seq1  AATGTGTGCACAGATATCATACACAGAGAGAATGTGTGCACAGATATCGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGCACAGATATCATACACAGAGAGAATGTGTGCACAGATATCGT  300

seq1  ACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTTC  350

seq1  TTCAAAATGAAAATCCAGGACATGTAAGTCAGTATCAATGGCATTGTAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATGAAAATCCAGGACATGTAAGTCAGTATCAATGGCATTGTAAA  400

seq1  AGAAGGAGTTCCATGAGCCAGAAAATTGATTCTTTAAGAGCAAAAGACAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGTTCCATGAGCCAGAAAATTGATTCTTTAAGAGCAAAAGACAG  450

seq1  GATTGGGAATTTAGCTCAGTGGTACAGCACTTGCCTAGCAAGCGCAAGGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGAATTTAGCTCAGTGGTACAGCACTTGCCTAGCAAGCGCAAGGC  500

seq1  CTTAGGTTCACGCCTCAGCTCTGGAAAAAAGAAAAAAAAAAAAAAAAAGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTCACGCCTCAGCTCTGGAAAAAAGAAAAAAAAAAAAAAAAAGC  550

seq1  AAAAGACACGGTAAAAAAGAAGGGCCAGAGACCAAGATGAAGCACCTCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACACGGTAAAAAAGAAGGGCCAGAGACCAAGATGAAGCACCTCTG  600

seq1  TTACTCCTACAAATAAGAACTCTCACTAGGGATTCTGCAGAGTTTGATCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCTACAAATAAGAACTCTCACTAGGGATTCTGCAGAGTTTGATCC  650

seq1  TTCCACAACCAAGAAGGATGGAAAGGGTACTAAGCCAAGAGCAGCACTGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAACCAAGAAGGATGGAAAGGGTACTAAGCCAAGAGCAGCACTGT  700

seq1  TATAGACATGGGGCTGGGCTGGATGCTTCTATAAGCACCTCATTTGCTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACATGGGGCTGGGCTGGATGCTTCTATAAGCACCTCATTTGCTCT  750

seq1  ATGGAATTC  754
      |||||||||
seq2  ATGGAATTC  759